RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 LINC00242Q5T6M2 205 aa9.62□□□□□ -0.87
SCAMP4-209ENST00000585335 NTN5Q8WTR8 489 aaPredicted RBP9.62□□□□□ -0.87
SCAMP4-209ENST00000585335 PGPEP1Q9NXJ5 209 aa9.62□□□□□ -0.87
SCAMP4-209ENST00000585335 FRAS1Q86XX4 4008 aa9.61□□□□□ -0.87
SCAMP4-209ENST00000585335 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
SCAMP4-209ENST00000585335 WFDC2Q14508 124 aa9.61□□□□□ -0.87
SCAMP4-209ENST00000585335 COA6Q5JTJ3 125 aaKnown RBP9.61□□□□□ -0.87
SCAMP4-209ENST00000585335 CDPF1Q6NVV7 123 aa9.61□□□□□ -0.87
SCAMP4-209ENST00000585335 SPATA12Q7Z6I5 190 aa9.61□□□□□ -0.87
SCAMP4-209ENST00000585335 DNAH2Q9P225 4427 aa9.6□□□□□ -0.87
SCAMP4-209ENST00000585335 IGHV3OR16-9A0A0B4J2B5 98 aa9.6□□□□□ -0.87
SCAMP4-209ENST00000585335 hDV102S1A0JD36 115 aa9.6□□□□□ -0.87
SCAMP4-209ENST00000585335 NUPR1O60356 82 aa9.6□□□□□ -0.87
SCAMP4-209ENST00000585335 FAM19A3Q7Z5A8 133 aa9.6□□□□□ -0.87
SCAMP4-209ENST00000585335 C5orf38Q86SI9 138 aa9.6□□□□□ -0.87
SCAMP4-209ENST00000585335 BIRC6Q9NR09 4857 aa9.6□□□□□ -0.87
SCAMP4-209ENST00000585335 DNAH10Q8IVF4 4471 aa9.6□□□□□ -0.87
SCAMP4-209ENST00000585335 A0A0J9YXV3 536 aa9.59□□□□□ -0.87
SCAMP4-209ENST00000585335 TINCRA0A1B0GVN0 87 aa9.59□□□□□ -0.87
SCAMP4-209ENST00000585335 FABP4P15090 132 aa9.59□□□□□ -0.87
SCAMP4-209ENST00000585335 PACRGQ96M98 296 aaPredicted RBP9.59□□□□□ -0.87
SCAMP4-209ENST00000585335 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.58□□□□□ -0.88
SCAMP4-209ENST00000585335 A0A087WZ39 114 aa9.58□□□□□ -0.88
SCAMP4-209ENST00000585335 IGLV5-52A0A0A0MRZ9 124 aa9.58□□□□□ -0.88
SCAMP4-209ENST00000585335 S100A6P06703 90 aa9.58□□□□□ -0.88
SCAMP4-209ENST00000585335 LINC00469Q8N7U9 141 aa9.58□□□□□ -0.88
SCAMP4-209ENST00000585335 DNAH17Q9UFH2 4485 aa9.57□□□□□ -0.88
SCAMP4-209ENST00000585335 GVQW2A0A096LPI5 108 aaPredicted RBP9.57□□□□□ -0.88
SCAMP4-209ENST00000585335 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.57□□□□□ -0.88
SCAMP4-209ENST00000585335 TRAV12-1A0A0B4J245 112 aa9.57□□□□□ -0.88
SCAMP4-209ENST00000585335 ZNF561-AS1K7EIQ3 104 aa9.57□□□□□ -0.88
SCAMP4-209ENST00000585335 LINC01561Q8N1V8 128 aa9.57□□□□□ -0.88
SCAMP4-209ENST00000585335 C15orf56Q8N910 161 aa9.57□□□□□ -0.88
SCAMP4-209ENST00000585335 OR10D4PQ8NGN7 298 aa9.57□□□□□ -0.88
SCAMP4-209ENST00000585335 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
SCAMP4-209ENST00000585335 CHTOPQ9Y3Y2 248 aaKnown RBP9.57□□□□□ -0.88
SCAMP4-209ENST00000585335 C16orf90A8MZG2 172 aa9.56□□□□□ -0.88
SCAMP4-209ENST00000585335 H3BRM9 83 aa9.56□□□□□ -0.88
SCAMP4-209ENST00000585335 IGLC3P0DOY3 106 aa9.56□□□□□ -0.88
SCAMP4-209ENST00000585335 KRTAP10-2P60368 255 aa9.56□□□□□ -0.88
SCAMP4-209ENST00000585335 COX6A2Q02221 97 aa9.56□□□□□ -0.88
SCAMP4-209ENST00000585335 HIGD2BQ4VC39 106 aa9.56□□□□□ -0.88
SCAMP4-209ENST00000585335 CHAC1Q9BUX1 264 aa9.56□□□□□ -0.88
SCAMP4-209ENST00000585335 H0Y8G0 127 aa9.55□□□□□ -0.88
SCAMP4-209ENST00000585335 ORAOV1Q8WV07 137 aa9.55□□□□□ -0.88
SCAMP4-209ENST00000585335 IGHV3-64A0A075B6Q5 118 aa9.54□□□□□ -0.88
SCAMP4-209ENST00000585335 SPAG11BQ08648 103 aa9.54□□□□□ -0.88
SCAMP4-209ENST00000585335 CDKN2A-AS1Q9UH64 79 aa9.54□□□□□ -0.88
SCAMP4-209ENST00000585335 IGLV5-45A0A087WSX0 123 aa9.53□□□□□ -0.88
SCAMP4-209ENST00000585335 F8VRH5 84 aa9.53□□□□□ -0.88
SCAMP4-209ENST00000585335 PRSS2P07478 247 aa9.53□□□□□ -0.88
SCAMP4-209ENST00000585335 S100A2P29034 98 aa9.53□□□□□ -0.88
SCAMP4-209ENST00000585335 CNBPP62633 177 aaKnown RBP9.53□□□□□ -0.88
SCAMP4-209ENST00000585335 IGLV4-69A0A075B6H9 119 aa9.52□□□□□ -0.89
SCAMP4-209ENST00000585335 F8WDY8 70 aa9.52□□□□□ -0.89
SCAMP4-209ENST00000585335 GCSHP23434 173 aa9.52□□□□□ -0.89
SCAMP4-209ENST00000585335 FAT2Q9NYQ8 4349 aa9.52□□□□□ -0.89
SCAMP4-209ENST00000585335 PLNP26678 52 aa9.51□□□□□ -0.89
SCAMP4-209ENST00000585335 FUSP35637 526 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCAMP4-209ENST00000585335 TMEM170BQ5T4T1 132 aa9.51□□□□□ -0.89
SCAMP4-209ENST00000585335 C2orf48Q96LS8 159 aa9.51□□□□□ -0.89
SCAMP4-209ENST00000585335 CAMK2N2Q96S95 79 aa9.51□□□□□ -0.89
SCAMP4-209ENST00000585335 MRPL35Q9NZE8 188 aaKnown RBP9.51□□□□□ -0.89
SCAMP4-209ENST00000585335 PKIGQ9Y2B9 76 aa9.51□□□□□ -0.89
SCAMP4-209ENST00000585335 C11orf86A6NJI1 115 aa9.5□□□□□ -0.89
SCAMP4-209ENST00000585335 ZNF22P17026 224 aaPredicted RBP9.5□□□□□ -0.89
SCAMP4-209ENST00000585335 ODF1Q14990 250 aa9.5□□□□□ -0.89
SCAMP4-209ENST00000585335 CARD19Q96LW7 228 aa9.5□□□□□ -0.89
SCAMP4-209ENST00000585335 TOMM7Q9P0U1 55 aa9.5□□□□□ -0.89
SCAMP4-209ENST00000585335 SYS1-DBNDD2H3BUS1 97 aa9.49□□□□□ -0.89
SCAMP4-209ENST00000585335 SYCNQ0VAF6 134 aa9.49□□□□□ -0.89
SCAMP4-209ENST00000585335 LINC00526Q96FQ7 95 aa9.49□□□□□ -0.89
SCAMP4-209ENST00000585335 C20orf202A1L168 122 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 SMIM1B2RUZ4 78 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 NDUFA1O15239 70 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 DPM2O94777 84 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 SPINK8P0C7L1 97 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 KRTDAPP60985 99 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 CKS1BP61024 79 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 C6orf226Q5I0X4 101 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 Q8IZM0 81 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 HIST3H2BBQ8N257 126 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 C9orf163Q8N9P6 203 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 KRTAP17-1Q9BYP8 105 aa9.48□□□□□ -0.89
SCAMP4-209ENST00000585335 IGKCP01834 107 aa9.46□□□□□ -0.9
SCAMP4-209ENST00000585335 CXCL5P42830 114 aa9.46□□□□□ -0.9
SCAMP4-209ENST00000585335 SNRPEP62304 92 aaKnown RBP9.46□□□□□ -0.9
SCAMP4-209ENST00000585335 COX7B2Q8TF08 81 aa9.46□□□□□ -0.9
SCAMP4-209ENST00000585335 SLPIP03973 132 aa9.45□□□□□ -0.9
SCAMP4-209ENST00000585335 C3orf79P0CE67 100 aa9.45□□□□□ -0.9
SCAMP4-209ENST00000585335 AKR1D1P51857 326 aa9.45□□□□□ -0.9
SCAMP4-209ENST00000585335 HERVK_113P61574 105 aa9.45□□□□□ -0.9
SCAMP4-209ENST00000585335 Q6ZRU5 148 aa9.45□□□□□ -0.9
SCAMP4-209ENST00000585335 HECTD4Q9Y4D8 3996 aa9.45□□□□□ -0.9
SCAMP4-209ENST00000585335 KIAA0087Q14695 138 aa9.44□□□□□ -0.9
SCAMP4-209ENST00000585335 RNF151Q2KHN1 245 aa9.44□□□□□ -0.9
SCAMP4-209ENST00000585335 LINC01620Q4KN68 170 aa9.44□□□□□ -0.9
SCAMP4-209ENST00000585335 LINC01545Q5VT33 79 aa9.44□□□□□ -0.9
SCAMP4-209ENST00000585335 HIST1H2BLQ99880 126 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms