RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 IGKV3D-7A0A0C4DH55 119 aa9.26□□□□□ -0.93
ITGB4-212ENST00000584558 SOCS3O14543 225 aa9.26□□□□□ -0.93
ITGB4-212ENST00000584558 TMEM258P61165 79 aa9.26□□□□□ -0.93
ITGB4-212ENST00000584558 Q8N2B8 174 aa9.26□□□□□ -0.93
ITGB4-212ENST00000584558 HIST1H4AP62805 103 aaKnown RBP9.25□□□□□ -0.93
ITGB4-212ENST00000584558 RPL18AQ02543 176 aaKnown RBP9.25□□□□□ -0.93
ITGB4-212ENST00000584558 APRG1Q8IVJ8 170 aa9.25□□□□□ -0.93
ITGB4-212ENST00000584558 A0A087WVE0 104 aa9.24□□□□□ -0.93
ITGB4-212ENST00000584558 Q9HAA7 133 aa9.24□□□□□ -0.93
ITGB4-212ENST00000584558 IGKV3-20P01619 116 aa9.24□□□□□ -0.93
ITGB4-212ENST00000584558 INAFM2P0DMQ5 153 aa9.24□□□□□ -0.93
ITGB4-212ENST00000584558 K7EMT4 169 aa9.23□□□□□ -0.93
ITGB4-212ENST00000584558 TENM1Q9UKZ4 2725 aa9.23□□□□□ -0.93
ITGB4-212ENST00000584558 TRAV12-2A0A075B6T6 113 aa9.23□□□□□ -0.93
ITGB4-212ENST00000584558 IGHV3-73A0A0B4J1V6 119 aa9.23□□□□□ -0.93
ITGB4-212ENST00000584558 EDN2P20800 178 aa9.23□□□□□ -0.93
ITGB4-212ENST00000584558 LINC00308Q8TCZ7 52 aa9.23□□□□□ -0.93
ITGB4-212ENST00000584558 FAM104AQ969W3 186 aa9.23□□□□□ -0.93
ITGB4-212ENST00000584558 KLLNB2CW77 178 aa9.22□□□□□ -0.93
ITGB4-212ENST00000584558 HOXD3P31249 432 aaPredicted RBP9.22□□□□□ -0.93
ITGB4-212ENST00000584558 CIRBPQ14011 172 aaKnown RBP9.22□□□□□ -0.93
ITGB4-212ENST00000584558 FAM218AQ96MZ4 157 aa9.22□□□□□ -0.93
ITGB4-212ENST00000584558 DNAL4O96015 105 aa9.22□□□□□ -0.93
ITGB4-212ENST00000584558 KRTAP1-1Q07627 177 aa9.22□□□□□ -0.93
ITGB4-212ENST00000584558 SERP2Q8N6R1 65 aa9.22□□□□□ -0.93
ITGB4-212ENST00000584558 C22orf24Q9Y442 160 aa9.22□□□□□ -0.93
ITGB4-212ENST00000584558 BEAN1Q3B7T3 259 aa9.22□□□□□ -0.93
ITGB4-212ENST00000584558 RHPN1-AS1Q9BWJ2 59 aa9.22□□□□□ -0.93
ITGB4-212ENST00000584558 IGHV3-16A0A0C4DH30 117 aa9.21□□□□□ -0.93
ITGB4-212ENST00000584558 TINCRA0A1B0GVN0 87 aa9.21□□□□□ -0.94
ITGB4-212ENST00000584558 Q5XG85 94 aa9.21□□□□□ -0.94
ITGB4-212ENST00000584558 CDKN2A-AS1Q9UH64 79 aa9.21□□□□□ -0.94
ITGB4-212ENST00000584558 TIMM17BO60830 172 aa9.2□□□□□ -0.94
ITGB4-212ENST00000584558 PYGO1Q9Y3Y4 419 aa9.2□□□□□ -0.94
ITGB4-212ENST00000584558 C2CD3Q4AC94 2353 aa9.2□□□□□ -0.94
ITGB4-212ENST00000584558 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
ITGB4-212ENST00000584558 Q9H8V8 135 aa9.2□□□□□ -0.94
ITGB4-212ENST00000584558 SYNJ2BPP57105 145 aa9.19□□□□□ -0.94
ITGB4-212ENST00000584558 UPK3BQ9BT76 320 aa9.19□□□□□ -0.94
ITGB4-212ENST00000584558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.19□□□□□ -0.94
ITGB4-212ENST00000584558 IGKV2-29A2NJV5 120 aaPredicted RBP9.19□□□□□ -0.94
ITGB4-212ENST00000584558 MALP21145 153 aa9.19□□□□□ -0.94
ITGB4-212ENST00000584558 PRIMA1Q86XR5 153 aa9.19□□□□□ -0.94
ITGB4-212ENST00000584558 TMEM86BQ8N661 226 aa9.19□□□□□ -0.94
ITGB4-212ENST00000584558 UBE2E2Q96LR5 201 aa9.19□□□□□ -0.94
ITGB4-212ENST00000584558 C14orf132Q9NPU4 83 aa9.19□□□□□ -0.94
ITGB4-212ENST00000584558 NDUFA1O15239 70 aa9.18□□□□□ -0.94
ITGB4-212ENST00000584558 USP17L23D6RBM5 183 aa9.18□□□□□ -0.94
ITGB4-212ENST00000584558 PROK1P58294 105 aa9.18□□□□□ -0.94
ITGB4-212ENST00000584558 SOSTDC1Q6X4U4 206 aa9.18□□□□□ -0.94
ITGB4-212ENST00000584558 SORL1Q92673 2214 aa9.17□□□□□ -0.94
ITGB4-212ENST00000584558 FAM222AQ5U5X8 452 aa9.17□□□□□ -0.94
ITGB4-212ENST00000584558 HTN1P15515 57 aa9.17□□□□□ -0.94
ITGB4-212ENST00000584558 C9orf129Q5T035 196 aaKnown RBP9.17□□□□□ -0.94
ITGB4-212ENST00000584558 LINC00846Q9NV44 126 aa9.16□□□□□ -0.94
ITGB4-212ENST00000584558 COL6A5A8TX70 2615 aa9.16□□□□□ -0.94
ITGB4-212ENST00000584558 LINC01561Q8N1V8 128 aa9.16□□□□□ -0.94
ITGB4-212ENST00000584558 Q9UF83 564 aa9.15□□□□□ -0.94
ITGB4-212ENST00000584558 FBN1P35555 2871 aaKnown RBP9.15□□□□□ -0.94
ITGB4-212ENST00000584558 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.15□□□□□ -0.94
ITGB4-212ENST00000584558 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
ITGB4-212ENST00000584558 STAB1Q9NY15 2570 aa9.15□□□□□ -0.94
ITGB4-212ENST00000584558 DNAJC9-AS1A6NH13 148 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 KNCNA6PVL3 124 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 FHL2Q14192 279 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 SPINK13Q1W4C9 94 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 Q6JHZ5 121 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 C18orf65Q6ZTR6 163 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 IGHV1OR15-1A0A075B7D0 117 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 IGHV3-38A0A0C4DH36 116 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 ESM1Q9NQ30 184 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 LINC00467Q9BRT7 94 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 WNK1Q9H4A3 2382 aa9.14□□□□□ -0.95
ITGB4-212ENST00000584558 VWFP04275 2813 aa9.13□□□□□ -0.95
ITGB4-212ENST00000584558 LY6G6DO95868 133 aa9.13□□□□□ -0.95
ITGB4-212ENST00000584558 COX6A2Q02221 97 aa9.13□□□□□ -0.95
ITGB4-212ENST00000584558 MRAPQ8TCY5 172 aa9.13□□□□□ -0.95
ITGB4-212ENST00000584558 CHCHD7Q9BUK0 85 aa9.12□□□□□ -0.95
ITGB4-212ENST00000584558 DGAT2L7PQ6IED9 249 aa9.12□□□□□ -0.95
ITGB4-212ENST00000584558 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
ITGB4-212ENST00000584558 K7EQG2 157 aa9.11□□□□□ -0.95
ITGB4-212ENST00000584558 HIST2H2BDQ6DRA6 164 aa9.11□□□□□ -0.95
ITGB4-212ENST00000584558 A0A087WYN8 130 aa9.11□□□□□ -0.95
ITGB4-212ENST00000584558 HILS1P60008 231 aa9.11□□□□□ -0.95
ITGB4-212ENST00000584558 C4orf3Q8WVX3 66 aa9.11□□□□□ -0.95
ITGB4-212ENST00000584558 DEFB136Q30KP8 78 aa9.1□□□□□ -0.95
ITGB4-212ENST00000584558 SLURP1P55000 103 aa9.1□□□□□ -0.95
ITGB4-212ENST00000584558 INAFM1C9JVW0 142 aa9.1□□□□□ -0.95
ITGB4-212ENST00000584558 NCR3O14931 201 aa9.1□□□□□ -0.95
ITGB4-212ENST00000584558 CRPP02741 224 aa9.1□□□□□ -0.95
ITGB4-212ENST00000584558 PFN2P35080 140 aa9.1□□□□□ -0.95
ITGB4-212ENST00000584558 WFDC9Q8NEX5 89 aa9.1□□□□□ -0.95
ITGB4-212ENST00000584558 TRRAPQ9Y4A5 3859 aa9.09□□□□□ -0.95
ITGB4-212ENST00000584558 GHRHP01286 108 aa9.09□□□□□ -0.95
ITGB4-212ENST00000584558 TRAV23DV6A0A075B6W5 121 aa9.09□□□□□ -0.95
ITGB4-212ENST00000584558 TMEM243Q9BU79 118 aa9.09□□□□□ -0.95
ITGB4-212ENST00000584558 ZNF415Q09FC8 603 aa9.08□□□□□ -0.96
ITGB4-212ENST00000584558 C20orf197Q8N268 126 aa9.08□□□□□ -0.96
ITGB4-212ENST00000584558 NOTCH3Q9UM47 2321 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms