RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 FA2HQ7L5A8 372 aa8.51□□□□□ -1.05
CDK5RAP3-234ENST00000584525 PRSS1P07477 247 aa8.5□□□□□ -1.05
CDK5RAP3-234ENST00000584525 HIGD2BQ4VC39 106 aa8.5□□□□□ -1.05
CDK5RAP3-234ENST00000584525 KRTAP26-1Q6PEX3 210 aa8.5□□□□□ -1.05
CDK5RAP3-234ENST00000584525 CD164L2Q6UWJ8 174 aa8.5□□□□□ -1.05
CDK5RAP3-234ENST00000584525 C2orf66Q6UXQ4 117 aa8.5□□□□□ -1.05
CDK5RAP3-234ENST00000584525 IGHV1-58A0A0C4DH39 117 aa8.49□□□□□ -1.05
CDK5RAP3-234ENST00000584525 ZNF561-AS1K7EIQ3 104 aa8.49□□□□□ -1.05
CDK5RAP3-234ENST00000584525 COX7A2LO14548 114 aa8.49□□□□□ -1.05
CDK5RAP3-234ENST00000584525 APOMO95445 188 aa8.49□□□□□ -1.05
CDK5RAP3-234ENST00000584525 MRPS36P82909 103 aaKnown RBP8.49□□□□□ -1.05
CDK5RAP3-234ENST00000584525 PAPPA-AS1Q5QFB9 102 aa8.49□□□□□ -1.05
CDK5RAP3-234ENST00000584525 TEX43Q6ZNM6 134 aa8.49□□□□□ -1.05
CDK5RAP3-234ENST00000584525 SLC7A5P1Q8MH63 180 aa8.49□□□□□ -1.05
CDK5RAP3-234ENST00000584525 TMEM141Q96I45 108 aa8.49□□□□□ -1.05
CDK5RAP3-234ENST00000584525 RPL37AP61513 92 aaKnown RBP8.48□□□□□ -1.05
CDK5RAP3-234ENST00000584525 FOXI1Q12951 378 aa8.48□□□□□ -1.05
CDK5RAP3-234ENST00000584525 ALKBH7Q9BT30 221 aaPredicted RBP8.48□□□□□ -1.05
CDK5RAP3-234ENST00000584525 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
CDK5RAP3-234ENST00000584525 LINC01549A6NIU2 74 aa8.47□□□□□ -1.05
CDK5RAP3-234ENST00000584525 OPRPNQ99935 248 aaPredicted RBP8.47□□□□□ -1.05
CDK5RAP3-234ENST00000584525 VCX2Q9H322 139 aa8.47□□□□□ -1.05
CDK5RAP3-234ENST00000584525 PKIGQ9Y2B9 76 aa8.47□□□□□ -1.05
CDK5RAP3-234ENST00000584525 IGLV4-3A0A075B6K6 122 aa8.46□□□□□ -1.06
CDK5RAP3-234ENST00000584525 IGHV3-64A0A075B6Q5 118 aa8.46□□□□□ -1.06
CDK5RAP3-234ENST00000584525 GVQW2A0A096LPI5 108 aaPredicted RBP8.45□□□□□ -1.06
CDK5RAP3-234ENST00000584525 RAB5BP61020 215 aa8.45□□□□□ -1.06
CDK5RAP3-234ENST00000584525 CNBPP62633 177 aaKnown RBP8.45□□□□□ -1.06
CDK5RAP3-234ENST00000584525 C5orf38Q86SI9 138 aa8.45□□□□□ -1.06
CDK5RAP3-234ENST00000584525 C15orf56Q8N910 161 aa8.45□□□□□ -1.06
CDK5RAP3-234ENST00000584525 C9orf163Q8N9P6 203 aa8.45□□□□□ -1.06
CDK5RAP3-234ENST00000584525 DPH3Q96FX2 82 aa8.45□□□□□ -1.06
CDK5RAP3-234ENST00000584525 SCGB3A1Q96QR1 104 aa8.45□□□□□ -1.06
CDK5RAP3-234ENST00000584525 NPSP0C0P6 89 aa8.44□□□□□ -1.06
CDK5RAP3-234ENST00000584525 HNRNPA3P51991 378 aaKnown RBP8.44□□□□□ -1.06
CDK5RAP3-234ENST00000584525 CBLN2Q8IUK8 224 aa8.44□□□□□ -1.06
CDK5RAP3-234ENST00000584525 PKHD1L1Q86WI1 4243 aa8.43□□□□□ -1.06
CDK5RAP3-234ENST00000584525 TOMM6Q96B49 74 aa8.43□□□□□ -1.06
CDK5RAP3-234ENST00000584525 CARD19Q96LW7 228 aa8.43□□□□□ -1.06
CDK5RAP3-234ENST00000584525 TIMM17AQ99595 171 aa8.43□□□□□ -1.06
CDK5RAP3-234ENST00000584525 SEC11AP67812 179 aa8.42□□□□□ -1.06
CDK5RAP3-234ENST00000584525 SPAG11BQ08648 103 aa8.42□□□□□ -1.06
CDK5RAP3-234ENST00000584525 ERASQ7Z444 233 aa8.42□□□□□ -1.06
CDK5RAP3-234ENST00000584525 ORAOV1Q8WV07 137 aa8.42□□□□□ -1.06
CDK5RAP3-234ENST00000584525 CAMK2N2Q96S95 79 aa8.42□□□□□ -1.06
CDK5RAP3-234ENST00000584525 C18orf32Q8TCD1 76 aa8.41□□□□□ -1.06
CDK5RAP3-234ENST00000584525 PACRGQ96M98 296 aaPredicted RBP8.41□□□□□ -1.06
CDK5RAP3-234ENST00000584525 GEMIN7Q9H840 131 aaKnown RBP8.41□□□□□ -1.06
CDK5RAP3-234ENST00000584525 LINC00614P0C842 121 aa8.4□□□□□ -1.06
CDK5RAP3-234ENST00000584525 SYCNQ0VAF6 134 aa8.4□□□□□ -1.06
CDK5RAP3-234ENST00000584525 OR10D4PQ8NGN7 298 aa8.4□□□□□ -1.06
CDK5RAP3-234ENST00000584525 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.06
CDK5RAP3-234ENST00000584525 IGLV4-69A0A075B6H9 119 aa8.39□□□□□ -1.07
CDK5RAP3-234ENST00000584525 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.39□□□□□ -1.07
CDK5RAP3-234ENST00000584525 HBDP02042 147 aa8.39□□□□□ -1.07
CDK5RAP3-234ENST00000584525 PRSS2P07478 247 aa8.39□□□□□ -1.07
CDK5RAP3-234ENST00000584525 UBE2D1P51668 147 aa8.39□□□□□ -1.07
CDK5RAP3-234ENST00000584525 NDUFA6P56556 154 aa8.39□□□□□ -1.07
CDK5RAP3-234ENST00000584525 HERVK_113P63121 156 aa8.39□□□□□ -1.07
CDK5RAP3-234ENST00000584525 RNF213Q63HN8 5207 aa8.38□□□□□ -1.07
CDK5RAP3-234ENST00000584525 IGIPA6NJ69 53 aa8.38□□□□□ -1.07
CDK5RAP3-234ENST00000584525 ZC2HC1BQ5TFG8 222 aa8.38□□□□□ -1.07
CDK5RAP3-234ENST00000584525 BAGE3Q86Y29 109 aa8.38□□□□□ -1.07
CDK5RAP3-234ENST00000584525 AMELXQ99217 191 aa8.38□□□□□ -1.07
CDK5RAP3-234ENST00000584525 IGHV3OR16-9A0A0B4J2B5 98 aa8.37□□□□□ -1.07
CDK5RAP3-234ENST00000584525 IGKV2-24A0A0C4DH68 120 aa8.37□□□□□ -1.07
CDK5RAP3-234ENST00000584525 MT1HL1P0DM35 61 aa8.37□□□□□ -1.07
CDK5RAP3-234ENST00000584525 COX6A2Q02221 97 aa8.37□□□□□ -1.07
CDK5RAP3-234ENST00000584525 LINC00242Q5T6M2 205 aa8.37□□□□□ -1.07
CDK5RAP3-234ENST00000584525 C2orf48Q96LS8 159 aa8.37□□□□□ -1.07
CDK5RAP3-234ENST00000584525 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP3-234ENST00000584525 LINC01546A6NGU7 62 aa8.36□□□□□ -1.07
CDK5RAP3-234ENST00000584525 NDUFA1O15239 70 aa8.36□□□□□ -1.07
CDK5RAP3-234ENST00000584525 SLPIP03973 132 aa8.36□□□□□ -1.07
CDK5RAP3-234ENST00000584525 Q6ZRU5 148 aa8.36□□□□□ -1.07
CDK5RAP3-234ENST00000584525 FAM104AQ969W3 186 aa8.36□□□□□ -1.07
CDK5RAP3-234ENST00000584525 TOMM7Q9P0U1 55 aa8.36□□□□□ -1.07
CDK5RAP3-234ENST00000584525 A0A087WZ39 114 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 F8WDY8 70 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 PANO1I0J062 215 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 HSBP1O75506 76 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 ATP5LO75964 103 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 RPL18AQ02543 176 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 PMVKQ15126 192 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 MAJINQ3KP22 176 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 SDIM1Q6ZPB5 146 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 LINC00173Q6ZV60 143 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 LINC00469Q8N7U9 141 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 CHCHD1Q96BP2 118 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 YPEL4Q96NS1 127 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
CDK5RAP3-234ENST00000584525 LOC107984640A0A0U1RRK4 108 aa8.34□□□□□ -1.07
CDK5RAP3-234ENST00000584525 TRGC2P03986 189 aa8.34□□□□□ -1.07
CDK5RAP3-234ENST00000584525 CKS1BP61024 79 aa8.34□□□□□ -1.07
CDK5RAP3-234ENST00000584525 PMCHL1Q16048 86 aa8.34□□□□□ -1.07
CDK5RAP3-234ENST00000584525 LINC01561Q8N1V8 128 aa8.34□□□□□ -1.07
CDK5RAP3-234ENST00000584525 A0A0J9YXV3 536 aa8.33□□□□□ -1.08
CDK5RAP3-234ENST00000584525 H3BRM9 83 aa8.33□□□□□ -1.08
CDK5RAP3-234ENST00000584525 CHTF8P0CG12 524 aa8.33□□□□□ -1.08
CDK5RAP3-234ENST00000584525 GAGE2BQ13066 116 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms