RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 MAP1LC3CQ9BXW4 147 aa13.51□□□□□ -0.25
SRSF1-206ENST00000583741 KRTDAPP60985 99 aa13.5□□□□□ -0.25
SRSF1-206ENST00000583741 DGAT2L7PQ6IED9 249 aa13.5□□□□□ -0.25
SRSF1-206ENST00000583741 C3orf79P0CE67 100 aa13.49□□□□□ -0.25
SRSF1-206ENST00000583741 AKR1D1P51857 326 aa13.49□□□□□ -0.25
SRSF1-206ENST00000583741 Q6ZN92 141 aa13.49□□□□□ -0.25
SRSF1-206ENST00000583741 LECT2O14960 151 aa13.48□□□□□ -0.25
SRSF1-206ENST00000583741 ZNF25P17030 456 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-206ENST00000583741 CSDC2Q9Y534 153 aaKnown RBP13.48□□□□□ -0.25
SRSF1-206ENST00000583741 IGLV4-3A0A075B6K6 122 aa13.48□□□□□ -0.25
SRSF1-206ENST00000583741 TMEM262E9PQX1 116 aa13.48□□□□□ -0.25
SRSF1-206ENST00000583741 H0Y8G0 127 aa13.48□□□□□ -0.25
SRSF1-206ENST00000583741 NPSP0C0P6 89 aa13.48□□□□□ -0.25
SRSF1-206ENST00000583741 OR5A1Q8NGJ0 315 aa13.48□□□□□ -0.25
SRSF1-206ENST00000583741 TMEM101Q96IK0 257 aa13.48□□□□□ -0.25
SRSF1-206ENST00000583741 OPRPNQ99935 248 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-206ENST00000583741 SYS1-DBNDD2H3BUS1 97 aa13.47□□□□□ -0.25
SRSF1-206ENST00000583741 PRSS1P07477 247 aa13.47□□□□□ -0.25
SRSF1-206ENST00000583741 PKIAP61925 76 aa13.47□□□□□ -0.25
SRSF1-206ENST00000583741 PAPPA-AS1Q5QFB9 102 aa13.47□□□□□ -0.25
SRSF1-206ENST00000583741 BAALCQ8WXS3 180 aa13.47□□□□□ -0.25
SRSF1-206ENST00000583741 TM2D2Q9BX73 214 aa13.47□□□□□ -0.25
SRSF1-206ENST00000583741 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.46□□□□□ -0.25
SRSF1-206ENST00000583741 MRPS36P82909 103 aaKnown RBP13.46□□□□□ -0.25
SRSF1-206ENST00000583741 LINC01620Q4KN68 170 aa13.46□□□□□ -0.25
SRSF1-206ENST00000583741 Q6ZUT4 128 aa13.46□□□□□ -0.25
SRSF1-206ENST00000583741 MPV17L2Q567V2 206 aa13.45□□□□□ -0.26
SRSF1-206ENST00000583741 SCXQ7RTU7 201 aa13.45□□□□□ -0.26
SRSF1-206ENST00000583741 FAM104AQ969W3 186 aa13.45□□□□□ -0.26
SRSF1-206ENST00000583741 A0A087WX48 190 aa13.44□□□□□ -0.26
SRSF1-206ENST00000583741 A0A1B0GUV1 79 aa13.44□□□□□ -0.26
SRSF1-206ENST00000583741 KRTAP10-4P60372 401 aaPredicted RBP13.44□□□□□ -0.26
SRSF1-206ENST00000583741 RBX1P62877 108 aa13.44□□□□□ -0.26
SRSF1-206ENST00000583741 Q8N976 141 aa13.44□□□□□ -0.26
SRSF1-206ENST00000583741 RNASE13Q5GAN3 156 aaKnown RBP13.43□□□□□ -0.26
SRSF1-206ENST00000583741 PET117Q6UWS5 81 aa13.43□□□□□ -0.26
SRSF1-206ENST00000583741 VCX2Q9H322 139 aa13.43□□□□□ -0.26
SRSF1-206ENST00000583741 IGLV4-60A0A075B6I1 120 aa13.42□□□□□ -0.26
SRSF1-206ENST00000583741 PMVKQ15126 192 aa13.42□□□□□ -0.26
SRSF1-206ENST00000583741 TEX43Q6ZNM6 134 aa13.42□□□□□ -0.26
SRSF1-206ENST00000583741 ZNF664Q8N3J9 261 aa13.42□□□□□ -0.26
SRSF1-206ENST00000583741 CDC42SE2Q9NRR3 84 aa13.42□□□□□ -0.26
SRSF1-206ENST00000583741 TRAV12-1A0A0B4J245 112 aa13.42□□□□□ -0.26
SRSF1-206ENST00000583741 ZC2HC1BQ5TFG8 222 aa13.42□□□□□ -0.26
SRSF1-206ENST00000583741 SERTAD4-AS1Q5TG53 156 aa13.42□□□□□ -0.26
SRSF1-206ENST00000583741 AMELXQ99217 191 aa13.42□□□□□ -0.26
SRSF1-206ENST00000583741 TRAV8-3A0A0A6YYJ7 113 aa13.41□□□□□ -0.26
SRSF1-206ENST00000583741 CST9LQ9H4G1 147 aa13.41□□□□□ -0.26
SRSF1-206ENST00000583741 C20orf202A1L168 122 aa13.4□□□□□ -0.26
SRSF1-206ENST00000583741 C2orf88Q9BSF0 95 aa13.4□□□□□ -0.26
SRSF1-206ENST00000583741 SCGB1D1O95968 90 aa13.39□□□□□ -0.27
SRSF1-206ENST00000583741 ODF1Q14990 250 aa13.39□□□□□ -0.27
SRSF1-206ENST00000583741 LINC01545Q5VT33 79 aa13.39□□□□□ -0.27
SRSF1-206ENST00000583741 ANGP03950 147 aaKnown RBP13.38□□□□□ -0.27
SRSF1-206ENST00000583741 JOSD1Q15040 202 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-206ENST00000583741 PYY3Q5JQD4 70 aa13.37□□□□□ -0.27
SRSF1-206ENST00000583741 PMCHL2Q9BQD1 86 aa13.37□□□□□ -0.27
SRSF1-206ENST00000583741 CHAC1Q9BUX1 264 aa13.37□□□□□ -0.27
SRSF1-206ENST00000583741 CHTOPQ9Y3Y2 248 aaKnown RBP13.37□□□□□ -0.27
SRSF1-206ENST00000583741 MRPL35Q9NZE8 188 aaKnown RBP13.36□□□□□ -0.27
SRSF1-206ENST00000583741 F8VRH5 84 aa13.36□□□□□ -0.27
SRSF1-206ENST00000583741 CIRBP-AS1Q8TBR5 109 aa13.36□□□□□ -0.27
SRSF1-206ENST00000583741 PKHD1L1Q86WI1 4243 aa13.35□□□□□ -0.27
SRSF1-206ENST00000583741 LINC00269Q8N2A0 174 aa13.35□□□□□ -0.27
SRSF1-206ENST00000583741 IGKV3OR2-268A0A0C4DH90 116 aa13.34□□□□□ -0.27
SRSF1-206ENST00000583741 OXTP01178 125 aa13.34□□□□□ -0.27
SRSF1-206ENST00000583741 CLPSL2Q6UWE3 100 aa13.34□□□□□ -0.27
SRSF1-206ENST00000583741 KLK12Q9UKR0 248 aa13.34□□□□□ -0.27
SRSF1-206ENST00000583741 TRAV13-1A0A0B4J241 112 aa13.33□□□□□ -0.28
SRSF1-206ENST00000583741 UBE2D1P51668 147 aa13.33□□□□□ -0.28
SRSF1-206ENST00000583741 COX11Q9Y6N1 276 aa13.33□□□□□ -0.28
SRSF1-206ENST00000583741 IGLV4-69A0A075B6H9 119 aa13.32□□□□□ -0.28
SRSF1-206ENST00000583741 A0A0J9YXV3 536 aa13.32□□□□□ -0.28
SRSF1-206ENST00000583741 DPM2O94777 84 aa13.32□□□□□ -0.28
SRSF1-206ENST00000583741 PLNP26678 52 aa13.32□□□□□ -0.28
SRSF1-206ENST00000583741 REG3AQ06141 175 aa13.32□□□□□ -0.28
SRSF1-206ENST00000583741 SMIM6P0DI80 62 aa13.31□□□□□ -0.28
SRSF1-206ENST00000583741 PLA2G2DQ9UNK4 145 aa13.31□□□□□ -0.28
SRSF1-206ENST00000583741 IGKV2D-24A0A075B6R9 120 aa13.3□□□□□ -0.28
SRSF1-206ENST00000583741 IGKCP01834 107 aa13.3□□□□□ -0.28
SRSF1-206ENST00000583741 CRPP02741 224 aa13.3□□□□□ -0.28
SRSF1-206ENST00000583741 IGLC3P0DOY3 106 aa13.3□□□□□ -0.28
SRSF1-206ENST00000583741 ATOH7Q8N100 152 aa13.3□□□□□ -0.28
SRSF1-206ENST00000583741 PRR34Q9NV39 138 aa13.3□□□□□ -0.28
SRSF1-206ENST00000583741 LINC00959A0A1B0GUT2 108 aa13.29□□□□□ -0.28
SRSF1-206ENST00000583741 RMI2Q96E14 147 aa13.29□□□□□ -0.28
SRSF1-206ENST00000583741 C11orf86A6NJI1 115 aa13.29□□□□□ -0.28
SRSF1-206ENST00000583741 SEC11AP67812 179 aa13.29□□□□□ -0.28
SRSF1-206ENST00000583741 SS18Q15532 418 aa13.29□□□□□ -0.28
SRSF1-206ENST00000583741 LINC00242Q5T6M2 205 aa13.29□□□□□ -0.28
SRSF1-206ENST00000583741 FAM19A3Q7Z5A8 133 aa13.29□□□□□ -0.28
SRSF1-206ENST00000583741 UBE2WQ96B02 151 aa13.29□□□□□ -0.28
SRSF1-206ENST00000583741 TINCRA0A1B0GVN0 87 aa13.28□□□□□ -0.28
SRSF1-206ENST00000583741 GEMIN7Q9H840 131 aaKnown RBP13.28□□□□□ -0.28
SRSF1-206ENST00000583741 CCL25O15444 150 aa13.27□□□□□ -0.29
SRSF1-206ENST00000583741 ENHOQ6UWT2 76 aa13.27□□□□□ -0.29
SRSF1-206ENST00000583741 HERVK_113P63121 156 aa13.26□□□□□ -0.29
SRSF1-206ENST00000583741 MIAQ16674 131 aa13.25□□□□□ -0.29
SRSF1-206ENST00000583741 IGLV10-54A0A075B6I4 117 aa13.24□□□□□ -0.29
SRSF1-206ENST00000583741 HNRNPA3P51991 378 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms