RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 A0A087WZ39 114 aa6.16□□□□□ -1.42
UBBP4-201ENST00000583708 S100A6P06703 90 aa6.16□□□□□ -1.42
UBBP4-201ENST00000583708 MALP21145 153 aa6.16□□□□□ -1.42
UBBP4-201ENST00000583708 XCL1P47992 114 aa6.16□□□□□ -1.42
UBBP4-201ENST00000583708 LINC00310P59036 64 aa6.16□□□□□ -1.42
UBBP4-201ENST00000583708 TNP2Q05952 138 aa6.16□□□□□ -1.42
UBBP4-201ENST00000583708 LINC00242Q5T6M2 205 aa6.16□□□□□ -1.42
UBBP4-201ENST00000583708 SPATA12Q7Z6I5 190 aa6.16□□□□□ -1.42
UBBP4-201ENST00000583708 H3BRM9 83 aa6.15□□□□□ -1.42
UBBP4-201ENST00000583708 NDUFA6P56556 154 aa6.15□□□□□ -1.42
UBBP4-201ENST00000583708 PMCHL1Q16048 86 aa6.15□□□□□ -1.42
UBBP4-201ENST00000583708 FAM19A2Q8N3H0 131 aa6.15□□□□□ -1.42
UBBP4-201ENST00000583708 Q8N814 137 aa6.15□□□□□ -1.42
UBBP4-201ENST00000583708 MAPKAPK5-AS1Q8N8E1 139 aa6.15□□□□□ -1.42
UBBP4-201ENST00000583708 OR10D4PQ8NGN7 298 aa6.15□□□□□ -1.42
UBBP4-201ENST00000583708 MAP1LC3CQ9BXW4 147 aa6.15□□□□□ -1.42
UBBP4-201ENST00000583708 PKIGQ9Y2B9 76 aa6.15□□□□□ -1.42
UBBP4-201ENST00000583708 RYR3Q15413 4870 aa6.15□□□□□ -1.43
UBBP4-201ENST00000583708 IGLV5-45A0A087WSX0 123 aa6.14□□□□□ -1.43
UBBP4-201ENST00000583708 GVQW2A0A096LPI5 108 aaPredicted RBP6.14□□□□□ -1.43
UBBP4-201ENST00000583708 USP17L23D6RBM5 183 aa6.14□□□□□ -1.43
UBBP4-201ENST00000583708 NUPR1O60356 82 aa6.14□□□□□ -1.43
UBBP4-201ENST00000583708 IGLC3P0DOY3 106 aa6.14□□□□□ -1.43
UBBP4-201ENST00000583708 RNASE13Q5GAN3 156 aaKnown RBP6.14□□□□□ -1.43
UBBP4-201ENST00000583708 FAT2Q9NYQ8 4349 aa6.13□□□□□ -1.43
UBBP4-201ENST00000583708 IGHV3-64A0A075B6Q5 118 aa6.13□□□□□ -1.43
UBBP4-201ENST00000583708 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.13□□□□□ -1.43
UBBP4-201ENST00000583708 A0A1B0GVY2 172 aa6.13□□□□□ -1.43
UBBP4-201ENST00000583708 F8VRH5 84 aa6.13□□□□□ -1.43
UBBP4-201ENST00000583708 ZNF561-AS1K7EIQ3 104 aa6.13□□□□□ -1.43
UBBP4-201ENST00000583708 CNBPP62633 177 aaKnown RBP6.13□□□□□ -1.43
UBBP4-201ENST00000583708 C2orf48Q96LS8 159 aa6.13□□□□□ -1.43
UBBP4-201ENST00000583708 CHTOPQ9Y3Y2 248 aaKnown RBP6.13□□□□□ -1.43
UBBP4-201ENST00000583708 A0A0J9YXV3 536 aa6.12□□□□□ -1.43
UBBP4-201ENST00000583708 PLNP26678 52 aa6.12□□□□□ -1.43
UBBP4-201ENST00000583708 S100A2P29034 98 aa6.12□□□□□ -1.43
UBBP4-201ENST00000583708 SFTA2Q6UW10 78 aa6.12□□□□□ -1.43
UBBP4-201ENST00000583708 PET117Q6UWS5 81 aa6.12□□□□□ -1.43
UBBP4-201ENST00000583708 FABP4P15090 132 aa6.11□□□□□ -1.43
UBBP4-201ENST00000583708 COX6A2Q02221 97 aa6.11□□□□□ -1.43
UBBP4-201ENST00000583708 RNF151Q2KHN1 245 aa6.11□□□□□ -1.43
UBBP4-201ENST00000583708 C5orf38Q86SI9 138 aa6.11□□□□□ -1.43
UBBP4-201ENST00000583708 LINC00469Q8N7U9 141 aa6.11□□□□□ -1.43
UBBP4-201ENST00000583708 C15orf56Q8N910 161 aa6.11□□□□□ -1.43
UBBP4-201ENST00000583708 hDV102S1A0JD36 115 aa6.1□□□□□ -1.43
UBBP4-201ENST00000583708 SYS1-DBNDD2H3BUS1 97 aa6.1□□□□□ -1.43
UBBP4-201ENST00000583708 CXCL5P42830 114 aa6.1□□□□□ -1.43
UBBP4-201ENST00000583708 ODF1Q14990 250 aa6.1□□□□□ -1.43
UBBP4-201ENST00000583708 ZC2HC1BQ5TFG8 222 aa6.1□□□□□ -1.43
UBBP4-201ENST00000583708 Q8IZM0 81 aa6.1□□□□□ -1.43
UBBP4-201ENST00000583708 CHAC1Q9BUX1 264 aa6.1□□□□□ -1.43
UBBP4-201ENST00000583708 CDKN2A-AS1Q9UH64 79 aa6.1□□□□□ -1.43
UBBP4-201ENST00000583708 IGLV4-69A0A075B6H9 119 aa6.09□□□□□ -1.43
UBBP4-201ENST00000583708 IGLV5-52A0A0A0MRZ9 124 aa6.09□□□□□ -1.43
UBBP4-201ENST00000583708 C20orf202A1L168 122 aa6.09□□□□□ -1.43
UBBP4-201ENST00000583708 C5orf52A6NGY3 159 aa6.09□□□□□ -1.43
UBBP4-201ENST00000583708 C11orf86A6NJI1 115 aa6.09□□□□□ -1.43
UBBP4-201ENST00000583708 DPM2O94777 84 aa6.09□□□□□ -1.43
UBBP4-201ENST00000583708 PRSS2P07478 247 aa6.09□□□□□ -1.43
UBBP4-201ENST00000583708 HIST3H2BBQ8N257 126 aa6.09□□□□□ -1.43
UBBP4-201ENST00000583708 C9orf163Q8N9P6 203 aa6.09□□□□□ -1.43
UBBP4-201ENST00000583708 ORAOV1Q8WV07 137 aa6.09□□□□□ -1.43
UBBP4-201ENST00000583708 MRPL35Q9NZE8 188 aaKnown RBP6.09□□□□□ -1.43
UBBP4-201ENST00000583708 IGLV5-39A0A0G2JS06 123 aa6.08□□□□□ -1.44
UBBP4-201ENST00000583708 LECT2O14960 151 aa6.08□□□□□ -1.44
UBBP4-201ENST00000583708 GCSHP23434 173 aa6.08□□□□□ -1.44
UBBP4-201ENST00000583708 SYCNQ0VAF6 134 aa6.08□□□□□ -1.44
UBBP4-201ENST00000583708 WFDC2Q14508 124 aa6.08□□□□□ -1.44
UBBP4-201ENST00000583708 C6orf226Q5I0X4 101 aa6.08□□□□□ -1.44
UBBP4-201ENST00000583708 PKD1P98161 4303 aa6.08□□□□□ -1.44
UBBP4-201ENST00000583708 HECTD4Q9Y4D8 3996 aa6.08□□□□□ -1.44
UBBP4-201ENST00000583708 DNAH11Q96DT5 4516 aa6.07□□□□□ -1.44
UBBP4-201ENST00000583708 SMIM1B2RUZ4 78 aa6.07□□□□□ -1.44
UBBP4-201ENST00000583708 NDUFA1O15239 70 aa6.07□□□□□ -1.44
UBBP4-201ENST00000583708 IGKCP01834 107 aa6.07□□□□□ -1.44
UBBP4-201ENST00000583708 ZNF22P17026 224 aaPredicted RBP6.07□□□□□ -1.44
UBBP4-201ENST00000583708 HERVK_113P61574 105 aa6.07□□□□□ -1.44
UBBP4-201ENST00000583708 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
UBBP4-201ENST00000583708 SPAG11BQ08648 103 aa6.07□□□□□ -1.44
UBBP4-201ENST00000583708 KIAA0087Q14695 138 aa6.07□□□□□ -1.44
UBBP4-201ENST00000583708 TMEM170BQ5T4T1 132 aa6.07□□□□□ -1.44
UBBP4-201ENST00000583708 LINC01545Q5VT33 79 aa6.07□□□□□ -1.44
UBBP4-201ENST00000583708 TRBV30A0A0K0K1B3 111 aa6.06□□□□□ -1.44
UBBP4-201ENST00000583708 C16orf90A8MZG2 172 aa6.06□□□□□ -1.44
UBBP4-201ENST00000583708 C3orf79P0CE67 100 aa6.06□□□□□ -1.44
UBBP4-201ENST00000583708 CKS1BP61024 79 aa6.06□□□□□ -1.44
UBBP4-201ENST00000583708 CARD19Q96LW7 228 aa6.06□□□□□ -1.44
UBBP4-201ENST00000583708 CAMK2N2Q96S95 79 aa6.06□□□□□ -1.44
UBBP4-201ENST00000583708 HIST1H2BLQ99880 126 aa6.06□□□□□ -1.44
UBBP4-201ENST00000583708 LINC00474Q9P2X8 69 aa6.06□□□□□ -1.44
UBBP4-201ENST00000583708 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.05□□□□□ -1.44
UBBP4-201ENST00000583708 TMEM223A0PJW6 202 aa6.05□□□□□ -1.44
UBBP4-201ENST00000583708 LINC00587B1AMM8 73 aa6.05□□□□□ -1.44
UBBP4-201ENST00000583708 KRTAP10-2P60368 255 aa6.05□□□□□ -1.44
UBBP4-201ENST00000583708 HIGD2BQ4VC39 106 aa6.05□□□□□ -1.44
UBBP4-201ENST00000583708 COX7B2Q8TF08 81 aa6.05□□□□□ -1.44
UBBP4-201ENST00000583708 PLEKHB2Q96CS7 222 aa6.05□□□□□ -1.44
UBBP4-201ENST00000583708 H0Y8G0 127 aa6.04□□□□□ -1.44
UBBP4-201ENST00000583708 SLPIP03973 132 aa6.04□□□□□ -1.44
UBBP4-201ENST00000583708 TLX1NBP0CAT3 122 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms