RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114		D6R8Y8	96 aa		7.11	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	SRSF3	P84103	164 aa	Known RBP	7.11	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	C10orf25	Q5T742	122 aa		7.11	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	OR10D4P	Q8NGN7	298 aa		7.11	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	C20orf78	Q9BR46	151 aa		7.11	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	SMIM2	Q9BVW6	85 aa		7.11	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	NAT8	Q9UHE5	227 aa		7.11	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	TRBV24-1	A0A075B6N3	115 aa		7.1	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	LINC00862	A6NCI5	91 aa		7.1	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	NPY	P01303	97 aa		7.1	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	UNQ6190/PRO20217	Q6UXQ8	127 aa		7.1	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	7.1	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114		A0A087WZ39	114 aa		7.09	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	IGHV3OR16-9	A0A0B4J2B5	98 aa		7.09	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	NDUFA1	O15239	70 aa		7.09	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	RPL32	P62910	135 aa	Known RBP	7.09	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	HBB	P68871	147 aa		7.09	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	RNF151	Q2KHN1	245 aa		7.09	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	GAGE2E	Q4V326	116 aa		7.09	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	KRTAP11-1	Q8IUC1	163 aa		7.09	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	SPANXA1	Q9NS26	97 aa		7.09	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	MRPL35	Q9NZE8	188 aa	Known RBP	7.09	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	GAGE2D	Q9UEU5	116 aa		7.09	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114		A0A1B0GW15	77 aa		7.08	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	IGLV7-43	P04211	117 aa		7.08	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	PRR26	Q8N8Z3	221 aa		7.08	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	IMMP2L	Q96T52	175 aa		7.08	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	C6orf48	Q9UBA6	75 aa		7.08	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	LPA	P08519	4548 aa		7.08	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114		F8W036	122 aa		7.07	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	MRPS36	P82909	103 aa	Known RBP	7.07	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	TGIF2-C20orf24	A0A0A6YYL0	155 aa		7.06	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114		A0A1B0GVG6	124 aa		7.06	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114		A0A1B0GXF2	115 aa		7.06	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	PEA15	Q15121	130 aa		7.06	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	DIRC1	Q969H9	104 aa		7.06	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	IGLV4-3	A0A075B6K6	122 aa		7.05	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	S100A8	P05109	93 aa		7.05	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	RAB5A	P20339	215 aa		7.05	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	IFI27	P40305	119 aa	Predicted RBP	7.05	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	ZC2HC1B	Q5TFG8	222 aa		7.05	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	C2orf82	Q6UX34	121 aa		7.05	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	KRTAP7-1	Q8IUC3	87 aa		7.05	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	SMDT1	Q9H4I9	107 aa		7.05	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	LOC389332	A0A1B0GUA5	103 aa		7.04	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114		F8WDY8	70 aa		7.04	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114		H0Y9J4	135 aa		7.04	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114		M0QXV9	152 aa		7.04	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	TLX1NB	P0CAT3	122 aa		7.04	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	UBE2B	P63146	152 aa		7.04	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	KIAA0087	Q14695	138 aa		7.04	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	LINC00242	Q5T6M2	205 aa		7.04	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	TMEM136	Q6ZRR5	245 aa		7.04	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	ORMDL3	Q8N138	153 aa		7.04	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	PRELID3A	Q96N28	172 aa		7.04	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	PPBP	P02775	128 aa		7.03	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	TMEM141	Q96I45	108 aa		7.03	□□□□□ -1.28
CDK5RAP3-223	ENST00000582114	C9orf129	Q5T035	196 aa	Known RBP	7.02	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	TEX43	Q6ZNM6	134 aa		7.01	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	LINC00469	Q8N7U9	141 aa		7.01	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	PACRG	Q96M98	296 aa	Predicted RBP	7.01	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	TOMM7	Q9P0U1	55 aa		7.01	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	PYGO1	Q9Y3Y4	419 aa		7.01	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	TRBV30	A0A0K0K1B3	111 aa		7	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	NDUFC2-KCTD14	E9PQ53	114 aa		7	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	KRTAP1-4	P0C5Y4	121 aa		7	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	UBE2D1	P51668	147 aa		7	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	ATP5L2	Q7Z4Y8	100 aa		7	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	C2orf88	Q9BSF0	95 aa		7	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	MAP1LC3A	Q9H492	121 aa		7	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	PRSS2	P07478	247 aa		6.99	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	C2orf66	Q6UXQ4	117 aa		6.99	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	LINC00173	Q6ZV60	143 aa		6.99	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114		Q6ZN92	141 aa		6.98	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	VCX2	Q9H322	139 aa		6.98	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	CYSLTR1	Q9Y271	337 aa		6.98	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	IGLV1-50	A0A075B6I6	118 aa		6.97	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	CKS1B	P61024	79 aa		6.97	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	PRR4	Q16378	134 aa		6.97	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114		Q8N8P6	123 aa		6.97	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	XAGE1A	Q9HD64	81 aa		6.97	□□□□□ -1.29
CDK5RAP3-223	ENST00000582114	PRSS47	A8MTI9	375 aa		6.96	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	C6orf226	Q5I0X4	101 aa		6.96	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	AMELX	Q99217	191 aa		6.96	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.96	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	LAMTOR2	Q9Y2Q5	125 aa		6.96	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	LINC01561	Q8N1V8	128 aa		6.95	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	C22orf24	Q9Y442	160 aa		6.95	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	IGIP	A6NJ69	53 aa		6.94	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	ORMDL2	Q53FV1	153 aa		6.94	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114		Q8IZM0	81 aa		6.94	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	CDKN2A-AS1	Q9UH64	79 aa		6.94	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	ZNF861P	O60384	105 aa		6.93	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	TSPAN13	O95857	204 aa		6.93	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	MT-ND4L	P03901	98 aa		6.93	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	RPL13A	P40429	203 aa	Known RBP	6.93	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	HERVK_113	P63121	156 aa		6.92	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	KIAA1644	Q3SXP7	199 aa		6.92	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	ANAPC16	Q96DE5	110 aa		6.92	□□□□□ -1.3
CDK5RAP3-223	ENST00000582114	CTDSP1	Q9GZU7	261 aa		6.92	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms