RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 ZNF861PO60384 105 aa5.89□□□□□ -1.47
RFFL-208ENST00000581039 SUMO2P61956 95 aaKnown RBP5.89□□□□□ -1.47
RFFL-208ENST00000581039 CT83Q5H943 113 aa5.89□□□□□ -1.47
RFFL-208ENST00000581039 KRTAP7-1Q8IUC3 87 aa5.89□□□□□ -1.47
RFFL-208ENST00000581039 HIGD1CA8MV81 97 aa5.88□□□□□ -1.47
RFFL-208ENST00000581039 PPP1R2P9O14990 202 aa5.87□□□□□ -1.47
RFFL-208ENST00000581039 NRACQ8N912 160 aa5.87□□□□□ -1.47
RFFL-208ENST00000581039 BATF3Q9NR55 127 aa5.87□□□□□ -1.47
RFFL-208ENST00000581039 TRBV30A0A0K0K1B3 111 aa5.86□□□□□ -1.47
RFFL-208ENST00000581039 NDUFC2-KCTD14E9PQ53 114 aa5.86□□□□□ -1.47
RFFL-208ENST00000581039 TMEM250H0YL14 139 aa5.86□□□□□ -1.47
RFFL-208ENST00000581039 RIGQ13278 110 aa5.86□□□□□ -1.47
RFFL-208ENST00000581039 TGIF2-C20orf24A0A0A6YYL0 155 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 IFITM10A6NMD0 228 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 TCAPO15273 167 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 NUPR1O60356 82 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 CRYGAP11844 174 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 CEBPGP53567 150 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 RPL39P62891 51 aaKnown RBP5.85□□□□□ -1.47
RFFL-208ENST00000581039 HBBP68871 147 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 KIAA0087Q14695 138 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 C9orf129Q5T035 196 aaKnown RBP5.85□□□□□ -1.47
RFFL-208ENST00000581039 TYMSOSQ8TAI1 123 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 FAM104AQ969W3 186 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 PACRGQ96M98 296 aaPredicted RBP5.85□□□□□ -1.47
RFFL-208ENST00000581039 C20orf78Q9BR46 151 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 SPANXA1Q9NS26 97 aa5.85□□□□□ -1.47
RFFL-208ENST00000581039 MRPS36P82909 103 aaKnown RBP5.84□□□□□ -1.47
RFFL-208ENST00000581039 LBHQ53QV2 105 aaPredicted RBP5.84□□□□□ -1.47
RFFL-208ENST00000581039 C2orf82Q6UX34 121 aa5.84□□□□□ -1.47
RFFL-208ENST00000581039 CTDSP1Q9GZU7 261 aa5.84□□□□□ -1.47
RFFL-208ENST00000581039 CDIP1Q9H305 208 aa5.84□□□□□ -1.47
RFFL-208ENST00000581039 A0A087X002 238 aa5.83□□□□□ -1.48
RFFL-208ENST00000581039 LINC00862A6NCI5 91 aa5.83□□□□□ -1.48
RFFL-208ENST00000581039 RPL28P46779 137 aaKnown RBP5.83□□□□□ -1.48
RFFL-208ENST00000581039 MRPL51Q4U2R6 128 aaKnown RBP5.83□□□□□ -1.48
RFFL-208ENST00000581039 OSTCQ9NRP0 149 aa5.83□□□□□ -1.48
RFFL-208ENST00000581039 C22orf24Q9Y442 160 aa5.83□□□□□ -1.48
RFFL-208ENST00000581039 TRBV24-1A0A075B6N3 115 aa5.82□□□□□ -1.48
RFFL-208ENST00000581039 CKS2P33552 79 aa5.82□□□□□ -1.48
RFFL-208ENST00000581039 RPL32P62910 135 aaKnown RBP5.82□□□□□ -1.48
RFFL-208ENST00000581039 FAM104BQ5XKR9 115 aa5.82□□□□□ -1.48
RFFL-208ENST00000581039 LINC01551Q86U37 167 aa5.82□□□□□ -1.48
RFFL-208ENST00000581039 SLC51BQ86UW2 128 aa5.82□□□□□ -1.48
RFFL-208ENST00000581039 ZNF727A8MUV8 499 aa5.81□□□□□ -1.48
RFFL-208ENST00000581039 TNFRSF6BO95407 300 aa5.81□□□□□ -1.48
RFFL-208ENST00000581039 LINC00242Q5T6M2 205 aa5.81□□□□□ -1.48
RFFL-208ENST00000581039 RETNLBQ9BQ08 111 aa5.81□□□□□ -1.48
RFFL-208ENST00000581039 SMIM7Q9BQ49 75 aa5.81□□□□□ -1.48
RFFL-208ENST00000581039 NAT8BQ9UHF3 227 aa5.81□□□□□ -1.48
RFFL-208ENST00000581039 BCE1O60756 84 aa5.8□□□□□ -1.48
RFFL-208ENST00000581039 PRSS2P07478 247 aa5.8□□□□□ -1.48
RFFL-208ENST00000581039 IFI27P40305 119 aaPredicted RBP5.8□□□□□ -1.48
RFFL-208ENST00000581039 CKS1BP61024 79 aa5.8□□□□□ -1.48
RFFL-208ENST00000581039 BLOC1S1P78537 153 aa5.8□□□□□ -1.48
RFFL-208ENST00000581039 LINC00469Q8N7U9 141 aa5.8□□□□□ -1.48
RFFL-208ENST00000581039 SMIM2Q9BVW6 85 aa5.8□□□□□ -1.48
RFFL-208ENST00000581039 V9GYV3 84 aa5.8□□□□□ -1.48
RFFL-208ENST00000581039 IGLV7-46A0A075B6I9 117 aa5.79□□□□□ -1.48
RFFL-208ENST00000581039 RAB5AP20339 215 aa5.79□□□□□ -1.48
RFFL-208ENST00000581039 TPRXLQ17RH7 258 aa5.79□□□□□ -1.48
RFFL-208ENST00000581039 C6orf226Q5I0X4 101 aa5.79□□□□□ -1.48
RFFL-208ENST00000581039 EIF5A2Q9GZV4 153 aaKnown RBP5.79□□□□□ -1.48
RFFL-208ENST00000581039 XAGE1AQ9HD64 81 aa5.79□□□□□ -1.48
RFFL-208ENST00000581039 ANAPC11Q9NYG5 84 aa5.79□□□□□ -1.48
RFFL-208ENST00000581039 MRPL55Q7Z7F7 128 aaKnown RBP5.78□□□□□ -1.48
RFFL-208ENST00000581039 LINC01561Q8N1V8 128 aa5.78□□□□□ -1.48
RFFL-208ENST00000581039 TOMM7Q9P0U1 55 aa5.78□□□□□ -1.48
RFFL-208ENST00000581039 TP73-AS1Q9UF72 201 aa5.78□□□□□ -1.48
RFFL-208ENST00000581039 PYGO1Q9Y3Y4 419 aa5.78□□□□□ -1.48
RFFL-208ENST00000581039 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
RFFL-208ENST00000581039 IGLV4-3A0A075B6K6 122 aa5.77□□□□□ -1.49
RFFL-208ENST00000581039 A0A1B0GW15 77 aa5.77□□□□□ -1.49
RFFL-208ENST00000581039 D6R8Y8 96 aa5.77□□□□□ -1.49
RFFL-208ENST00000581039 FAM74A3Q4VXF1 159 aa5.77□□□□□ -1.49
RFFL-208ENST00000581039 Q6ZN92 141 aa5.77□□□□□ -1.49
RFFL-208ENST00000581039 TEX43Q6ZNM6 134 aa5.77□□□□□ -1.49
RFFL-208ENST00000581039 LINC00173Q6ZV60 143 aa5.77□□□□□ -1.49
RFFL-208ENST00000581039 LINC00304Q8N9R0 145 aa5.77□□□□□ -1.49
RFFL-208ENST00000581039 TMEM141Q96I45 108 aa5.77□□□□□ -1.49
RFFL-208ENST00000581039 MUC17Q685J3 4493 aa5.77□□□□□ -1.49
RFFL-208ENST00000581039 RPL37AP8A6NKH3 93 aa5.76□□□□□ -1.49
RFFL-208ENST00000581039 F8W036 122 aa5.76□□□□□ -1.49
RFFL-208ENST00000581039 NPYP01303 97 aa5.76□□□□□ -1.49
RFFL-208ENST00000581039 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
RFFL-208ENST00000581039 C2orf88Q9BSF0 95 aa5.76□□□□□ -1.49
RFFL-208ENST00000581039 ALKBH7Q9BT30 221 aaPredicted RBP5.76□□□□□ -1.49
RFFL-208ENST00000581039 IGKV2D-26A0A0A0MRZ7 120 aa5.75□□□□□ -1.49
RFFL-208ENST00000581039 SMIM27A0A1W2PRY6 76 aa5.75□□□□□ -1.49
RFFL-208ENST00000581039 PPBPP02775 128 aa5.75□□□□□ -1.49
RFFL-208ENST00000581039 S100A8P05109 93 aa5.75□□□□□ -1.49
RFFL-208ENST00000581039 FAM229BQ4G0N7 80 aa5.75□□□□□ -1.49
RFFL-208ENST00000581039 ALKAL2Q6UX46 152 aa5.75□□□□□ -1.49
RFFL-208ENST00000581039 Q8IZM0 81 aa5.75□□□□□ -1.49
RFFL-208ENST00000581039 LINC00167Q96N53 147 aa5.75□□□□□ -1.49
RFFL-208ENST00000581039 SRP19P09132 144 aaKnown RBP5.74□□□□□ -1.49
RFFL-208ENST00000581039 UBE2AP49459 152 aa5.74□□□□□ -1.49
RFFL-208ENST00000581039 LINC01547P58512 204 aaPredicted RBP5.74□□□□□ -1.49
RFFL-208ENST00000581039 TCTE3Q8IZS6 198 aa5.74□□□□□ -1.49
RFFL-208ENST00000581039 VCX2Q9H322 139 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms