RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 MAPKAPK5-AS1Q8N8E1 139 aa4.29□□□□□ -1.72
PTPRM-213ENST00000580949 TTTY13Q9BZ97 58 aa4.29□□□□□ -1.72
PTPRM-213ENST00000580949 UQCR10Q9UDW1 63 aa4.29□□□□□ -1.72
PTPRM-213ENST00000580949 HUWE1Q7Z6Z7 4374 aaKnown RBP4.28□□□□□ -1.72
PTPRM-213ENST00000580949 IGLV4-60A0A075B6I1 120 aa4.28□□□□□ -1.72
PTPRM-213ENST00000580949 TRBV25-1A0A075B6N4 114 aa4.28□□□□□ -1.72
PTPRM-213ENST00000580949 A4D1N5 150 aa4.28□□□□□ -1.72
PTPRM-213ENST00000580949 H7C423 109 aa4.28□□□□□ -1.72
PTPRM-213ENST00000580949 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
PTPRM-213ENST00000580949 UBE2D1P51668 147 aa4.28□□□□□ -1.72
PTPRM-213ENST00000580949 CTAG1AP78358 180 aa4.28□□□□□ -1.72
PTPRM-213ENST00000580949 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
PTPRM-213ENST00000580949 SLC25A34Q6PIV7 304 aa4.28□□□□□ -1.72
PTPRM-213ENST00000580949 Q8N9P0 234 aaPredicted RBP4.28□□□□□ -1.72
PTPRM-213ENST00000580949 C11orf45Q8TAV5 145 aa4.28□□□□□ -1.72
PTPRM-213ENST00000580949 CDC42SE2Q9NRR3 84 aa4.28□□□□□ -1.72
PTPRM-213ENST00000580949 CSDC2Q9Y534 153 aaKnown RBP4.28□□□□□ -1.72
PTPRM-213ENST00000580949 ZNF22P17026 224 aaPredicted RBP4.27□□□□□ -1.73
PTPRM-213ENST00000580949 NMUP48645 174 aa4.27□□□□□ -1.73
PTPRM-213ENST00000580949 COX6A2Q02221 97 aa4.27□□□□□ -1.73
PTPRM-213ENST00000580949 MRPL23Q16540 153 aaKnown RBP4.27□□□□□ -1.73
PTPRM-213ENST00000580949 TMEM97Q5BJF2 176 aa4.27□□□□□ -1.73
PTPRM-213ENST00000580949 C2orf91Q6ZV80 131 aa4.27□□□□□ -1.73
PTPRM-213ENST00000580949 BOD1L2Q8IYS8 172 aa4.27□□□□□ -1.73
PTPRM-213ENST00000580949 OR5A1Q8NGJ0 315 aa4.27□□□□□ -1.73
PTPRM-213ENST00000580949 CHCHD5Q9BSY4 110 aa4.27□□□□□ -1.73
PTPRM-213ENST00000580949 CHAC1Q9BUX1 264 aa4.27□□□□□ -1.73
PTPRM-213ENST00000580949 MRPS16Q9Y3D3 137 aaKnown RBP4.27□□□□□ -1.73
PTPRM-213ENST00000580949 DNAH9Q9NYC9 4486 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 DEFB131BA0A096LNP1 70 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 IGLV5-39A0A0G2JS06 123 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 TINCRA0A1B0GVN0 87 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 TMEM223A0PJW6 202 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 E9PLD3 99 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 H3BNG1 76 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 UBE2L6O14933 153 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 DLEU1O43261 78 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 HNRNPA3P51991 378 aaKnown RBP4.26□□□□□ -1.73
PTPRM-213ENST00000580949 TSPEAR-AS2P59090 65 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 RBX1P62877 108 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 DEFA6Q01524 100 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 TMEM170BQ5T4T1 132 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 LINC00242Q5T6M2 205 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 AMMECR1LQ6DCA0 310 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 LYPD5Q6UWN5 251 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 SNHG12Q9BXW3 62 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 ICOSQ9Y6W8 199 aa4.26□□□□□ -1.73
PTPRM-213ENST00000580949 IGLV5-45A0A087WSX0 123 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 TRAV13-1A0A0B4J241 112 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 TRAV8-6A0A0B4J262 113 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 A0A1B0GUV1 79 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 TMEM262E9PQX1 116 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 VPREB1P12018 145 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 ZNF25P17030 456 aaPredicted RBP4.25□□□□□ -1.73
PTPRM-213ENST00000580949 KRTAP21-3Q3LHN1 58 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 MPV17L2Q567V2 206 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 SH2D6Q7Z4S9 175 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 FAM19A3Q7Z5A8 133 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 TMEM101Q96IK0 257 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 B9D2Q9BPU9 175 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 C2orf88Q9BSF0 95 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 CDKN2A-AS1Q9UH64 79 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 STAB2Q8WWQ8 2551 aa4.25□□□□□ -1.73
PTPRM-213ENST00000580949 IGHV3-64A0A075B6Q5 118 aa4.24□□□□□ -1.73
PTPRM-213ENST00000580949 TRAV8-3A0A0A6YYJ7 113 aa4.24□□□□□ -1.73
PTPRM-213ENST00000580949 SMAGPQ0VAQ4 97 aa4.24□□□□□ -1.73
PTPRM-213ENST00000580949 ESRGQ1W209 222 aa4.24□□□□□ -1.73
PTPRM-213ENST00000580949 LELP1Q5T871 98 aa4.24□□□□□ -1.73
PTPRM-213ENST00000580949 LINC00469Q8N7U9 141 aa4.24□□□□□ -1.73
PTPRM-213ENST00000580949 MEGF8Q7Z7M0 2845 aa4.23□□□□□ -1.73
PTPRM-213ENST00000580949 TRAV10A0A0B4J240 114 aa4.23□□□□□ -1.73
PTPRM-213ENST00000580949 IGKV3OR2-268A0A0C4DH90 116 aa4.23□□□□□ -1.73
PTPRM-213ENST00000580949 MYMXA0A1B0GTQ4 84 aa4.23□□□□□ -1.73
PTPRM-213ENST00000580949 LINC00959A0A1B0GUT2 108 aa4.23□□□□□ -1.73
PTPRM-213ENST00000580949 J3QQQ9 107 aa4.23□□□□□ -1.73
PTPRM-213ENST00000580949 M0R143 59 aa4.23□□□□□ -1.73
PTPRM-213ENST00000580949 LEPROTO15243 131 aa4.23□□□□□ -1.73
PTPRM-213ENST00000580949 SIVA1O15304 175 aa4.23□□□□□ -1.73
PTPRM-213ENST00000580949 SPINK8P0C7L1 97 aa4.23□□□□□ -1.73
PTPRM-213ENST00000580949 HINT1P49773 126 aaPredicted RBP4.23□□□□□ -1.73
PTPRM-213ENST00000580949 PLEKHB2Q96CS7 222 aa4.23□□□□□ -1.73
PTPRM-213ENST00000580949 GEMIN7Q9H840 131 aaKnown RBP4.23□□□□□ -1.73
PTPRM-213ENST00000580949 IGHV1-58A0A0C4DH39 117 aa4.22□□□□□ -1.73
PTPRM-213ENST00000580949 ZNF815PA8K554 130 aa4.22□□□□□ -1.73
PTPRM-213ENST00000580949 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
PTPRM-213ENST00000580949 HERVK_113P61574 105 aa4.22□□□□□ -1.73
PTPRM-213ENST00000580949 CLPSL2Q6UWE3 100 aa4.22□□□□□ -1.73
PTPRM-213ENST00000580949 LINC00269Q8N2A0 174 aa4.22□□□□□ -1.73
PTPRM-213ENST00000580949 HIGD1BQ9P298 99 aa4.22□□□□□ -1.73
PTPRM-213ENST00000580949 COL7A1Q02388 2944 aa4.22□□□□□ -1.73
PTPRM-213ENST00000580949 IGHV3OR16-9A0A0B4J2B5 98 aa4.21□□□□□ -1.74
PTPRM-213ENST00000580949 SMIM1B2RUZ4 78 aa4.21□□□□□ -1.74
PTPRM-213ENST00000580949 HERVK_113P63121 156 aa4.21□□□□□ -1.74
PTPRM-213ENST00000580949 SEC11AP67812 179 aa4.21□□□□□ -1.74
PTPRM-213ENST00000580949 BATFQ16520 125 aa4.21□□□□□ -1.74
PTPRM-213ENST00000580949 BVES-AS1Q5T3Y7 98 aa4.21□□□□□ -1.74
PTPRM-213ENST00000580949 WFDC10BQ8IUB3 73 aa4.21□□□□□ -1.74
PTPRM-213ENST00000580949 C10orf126Q8N4M7 172 aa4.21□□□□□ -1.74
PTPRM-213ENST00000580949 H3BRM9 83 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms