RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 OR10D4PQ8NGN7 298 aa13.43□□□□□ -0.26
SNX11-207ENST00000580875 PRR34Q9NV39 138 aa13.43□□□□□ -0.26
SNX11-207ENST00000580875 CYSLTR1Q9Y271 337 aa13.43□□□□□ -0.26
SNX11-207ENST00000580875 C2orf66Q6UXQ4 117 aa13.42□□□□□ -0.26
SNX11-207ENST00000580875 HMCN2Q8NDA2 5059 aa13.41□□□□□ -0.26
SNX11-207ENST00000580875 RBX1P62877 108 aa13.41□□□□□ -0.26
SNX11-207ENST00000580875 LINC00269Q8N2A0 174 aa13.41□□□□□ -0.26
SNX11-207ENST00000580875 C9orf163Q8N9P6 203 aa13.41□□□□□ -0.26
SNX11-207ENST00000580875 TOMM6Q96B49 74 aa13.41□□□□□ -0.26
SNX11-207ENST00000580875 TRBV25-1A0A075B6N4 114 aa13.4□□□□□ -0.26
SNX11-207ENST00000580875 GAGE6Q13070 117 aa13.4□□□□□ -0.26
SNX11-207ENST00000580875 CLPSL2Q6UWE3 100 aa13.4□□□□□ -0.26
SNX11-207ENST00000580875 FAT3Q8TDW7 4589 aa13.4□□□□□ -0.26
SNX11-207ENST00000580875 ATP5LO75964 103 aa13.39□□□□□ -0.27
SNX11-207ENST00000580875 KRTAP26-1Q6PEX3 210 aa13.39□□□□□ -0.27
SNX11-207ENST00000580875 C20orf203Q8NBC4 194 aa13.39□□□□□ -0.27
SNX11-207ENST00000580875 PLA2G2DQ9UNK4 145 aa13.39□□□□□ -0.27
SNX11-207ENST00000580875 KRTDAPP60985 99 aa13.38□□□□□ -0.27
SNX11-207ENST00000580875 LINC00173Q6ZV60 143 aa13.38□□□□□ -0.27
SNX11-207ENST00000580875 SCGB3A1Q96QR1 104 aa13.38□□□□□ -0.27
SNX11-207ENST00000580875 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.38□□□□□ -0.27
SNX11-207ENST00000580875 HNRNPA3P51991 378 aaKnown RBP13.37□□□□□ -0.27
SNX11-207ENST00000580875 RPL39P62891 51 aaKnown RBP13.37□□□□□ -0.27
SNX11-207ENST00000580875 IFI27L1Q96BM0 104 aa13.37□□□□□ -0.27
SNX11-207ENST00000580875 TMEM243Q9BU79 118 aa13.37□□□□□ -0.27
SNX11-207ENST00000580875 MAP1LC3CQ9BXW4 147 aa13.37□□□□□ -0.27
SNX11-207ENST00000580875 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.35□□□□□ -0.27
SNX11-207ENST00000580875 C3orf79P0CE67 100 aa13.35□□□□□ -0.27
SNX11-207ENST00000580875 SDIM1Q6ZPB5 146 aa13.35□□□□□ -0.27
SNX11-207ENST00000580875 ERASQ7Z444 233 aa13.35□□□□□ -0.27
SNX11-207ENST00000580875 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.34□□□□□ -0.27
SNX11-207ENST00000580875 IGKV2-29A2NJV5 120 aaPredicted RBP13.34□□□□□ -0.27
SNX11-207ENST00000580875 PANO1I0J062 215 aa13.34□□□□□ -0.27
SNX11-207ENST00000580875 UBE2L6O14933 153 aa13.34□□□□□ -0.27
SNX11-207ENST00000580875 REG3AQ06141 175 aa13.34□□□□□ -0.27
SNX11-207ENST00000580875 SMAGPQ0VAQ4 97 aa13.34□□□□□ -0.27
SNX11-207ENST00000580875 TIMM17AQ99595 171 aa13.34□□□□□ -0.27
SNX11-207ENST00000580875 IGLV10-54A0A075B6I4 117 aa13.33□□□□□ -0.28
SNX11-207ENST00000580875 CNBPP62633 177 aaKnown RBP13.33□□□□□ -0.28
SNX11-207ENST00000580875 Q6ZN92 141 aa13.33□□□□□ -0.28
SNX11-207ENST00000580875 TMEM141Q96I45 108 aa13.33□□□□□ -0.28
SNX11-207ENST00000580875 SPANXA1Q9NS26 97 aa13.33□□□□□ -0.28
SNX11-207ENST00000580875 SYS1-DBNDD2H3BUS1 97 aa13.32□□□□□ -0.28
SNX11-207ENST00000580875 H7C423 109 aa13.32□□□□□ -0.28
SNX11-207ENST00000580875 TRAV8-4A0A0B4J246 113 aa13.31□□□□□ -0.28
SNX11-207ENST00000580875 hDV102S1A0JD36 115 aa13.31□□□□□ -0.28
SNX11-207ENST00000580875 IGIPA6NJ69 53 aa13.31□□□□□ -0.28
SNX11-207ENST00000580875 H0Y8G0 127 aa13.31□□□□□ -0.28
SNX11-207ENST00000580875 PET117Q6UWS5 81 aa13.31□□□□□ -0.28
SNX11-207ENST00000580875 PYGO1Q9Y3Y4 419 aa13.31□□□□□ -0.28
SNX11-207ENST00000580875 C20orf202A1L168 122 aa13.3□□□□□ -0.28
SNX11-207ENST00000580875 NPSP0C0P6 89 aa13.3□□□□□ -0.28
SNX11-207ENST00000580875 CIRBPQ14011 172 aaKnown RBP13.3□□□□□ -0.28
SNX11-207ENST00000580875 TIMM21Q9BVV7 248 aa13.3□□□□□ -0.28
SNX11-207ENST00000580875 UBE2D4Q9Y2X8 147 aa13.3□□□□□ -0.28
SNX11-207ENST00000580875 UBR4Q5T4S7 5183 aa13.29□□□□□ -0.28
SNX11-207ENST00000580875 A0A1B0GUV1 79 aa13.29□□□□□ -0.28
SNX11-207ENST00000580875 JOSD1Q15040 202 aaPredicted RBP13.29□□□□□ -0.28
SNX11-207ENST00000580875 PAPPA-AS1Q5QFB9 102 aa13.29□□□□□ -0.28
SNX11-207ENST00000580875 AMMECR1LQ6DCA0 310 aa13.29□□□□□ -0.28
SNX11-207ENST00000580875 MRPL52Q86TS9 123 aaKnown RBP13.29□□□□□ -0.28
SNX11-207ENST00000580875 SCGB1D1O95968 90 aa13.28□□□□□ -0.28
SNX11-207ENST00000580875 SMIM6P0DI80 62 aa13.28□□□□□ -0.28
SNX11-207ENST00000580875 FGF6P10767 208 aa13.28□□□□□ -0.28
SNX11-207ENST00000580875 IGLV4-60A0A075B6I1 120 aa13.27□□□□□ -0.29
SNX11-207ENST00000580875 IGLV4-3A0A075B6K6 122 aa13.27□□□□□ -0.29
SNX11-207ENST00000580875 IGHV3-64A0A075B6Q5 118 aa13.27□□□□□ -0.29
SNX11-207ENST00000580875 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.27□□□□□ -0.29
SNX11-207ENST00000580875 ZNF25P17030 456 aaPredicted RBP13.27□□□□□ -0.29
SNX11-207ENST00000580875 PYY3Q5JQD4 70 aa13.27□□□□□ -0.29
SNX11-207ENST00000580875 Q6ZRU5 148 aa13.27□□□□□ -0.29
SNX11-207ENST00000580875 PKHD1L1Q86WI1 4243 aa13.26□□□□□ -0.29
SNX11-207ENST00000580875 OR5A1Q8NGJ0 315 aa13.26□□□□□ -0.29
SNX11-207ENST00000580875 DPH3Q96FX2 82 aa13.26□□□□□ -0.29
SNX11-207ENST00000580875 TMEM101Q96IK0 257 aa13.26□□□□□ -0.29
SNX11-207ENST00000580875 CSDC2Q9Y534 153 aaKnown RBP13.26□□□□□ -0.29
SNX11-207ENST00000580875 TRAV12-1A0A0B4J245 112 aa13.25□□□□□ -0.29
SNX11-207ENST00000580875 MT1HL1P0DM35 61 aa13.25□□□□□ -0.29
SNX11-207ENST00000580875 MRPS36P82909 103 aaKnown RBP13.25□□□□□ -0.29
SNX11-207ENST00000580875 LINC01545Q5VT33 79 aa13.25□□□□□ -0.29
SNX11-207ENST00000580875 SLPIP03973 132 aa13.24□□□□□ -0.29
SNX11-207ENST00000580875 PMVKQ15126 192 aa13.24□□□□□ -0.29
SNX11-207ENST00000580875 Q6ZUT4 128 aa13.24□□□□□ -0.29
SNX11-207ENST00000580875 OPRPNQ99935 248 aaPredicted RBP13.24□□□□□ -0.29
SNX11-207ENST00000580875 TEX43Q6ZNM6 134 aa13.23□□□□□ -0.29
SNX11-207ENST00000580875 VCX2Q9H322 139 aa13.23□□□□□ -0.29
SNX11-207ENST00000580875 A0A087WYN8 130 aa13.22□□□□□ -0.29
SNX11-207ENST00000580875 CHTF8P0CG12 524 aa13.22□□□□□ -0.29
SNX11-207ENST00000580875 ODF1Q14990 250 aa13.22□□□□□ -0.29
SNX11-207ENST00000580875 SPACA4Q8TDM5 124 aa13.22□□□□□ -0.29
SNX11-207ENST00000580875 C2orf88Q9BSF0 95 aa13.22□□□□□ -0.29
SNX11-207ENST00000580875 CST9LQ9H4G1 147 aa13.21□□□□□ -0.29
SNX11-207ENST00000580875 CHTOPQ9Y3Y2 248 aaKnown RBP13.21□□□□□ -0.29
SNX11-207ENST00000580875 RNASE13Q5GAN3 156 aaKnown RBP13.2□□□□□ -0.3
SNX11-207ENST00000580875 AMELXQ99217 191 aa13.2□□□□□ -0.3
SNX11-207ENST00000580875 PMCHL2Q9BQD1 86 aa13.2□□□□□ -0.3
SNX11-207ENST00000580875 F8VRH5 84 aa13.19□□□□□ -0.3
SNX11-207ENST00000580875 ZC2HC1BQ5TFG8 222 aa13.19□□□□□ -0.3
SNX11-207ENST00000580875 CFAP161Q6P656 301 aa13.19□□□□□ -0.3
SNX11-207ENST00000580875 ZNF664Q8N3J9 261 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms