RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 LINC00242Q5T6M2 205 aa9.52□□□□□ -0.89
SKA2-205ENST00000580541 HIST3H2BBQ8N257 126 aa9.52□□□□□ -0.89
SKA2-205ENST00000580541 CHTOPQ9Y3Y2 248 aaKnown RBP9.52□□□□□ -0.89
SKA2-205ENST00000580541 AKR1D1P51857 326 aa9.51□□□□□ -0.89
SKA2-205ENST00000580541 ZC2HC1BQ5TFG8 222 aa9.51□□□□□ -0.89
SKA2-205ENST00000580541 Q6ZRN7 208 aaPredicted RBP9.51□□□□□ -0.89
SKA2-205ENST00000580541 DNAH6Q9C0G6 4158 aa9.51□□□□□ -0.89
SKA2-205ENST00000580541 H0Y8G0 127 aa9.5□□□□□ -0.89
SKA2-205ENST00000580541 H3BRM9 83 aa9.5□□□□□ -0.89
SKA2-205ENST00000580541 FOXI1Q12951 378 aa9.5□□□□□ -0.89
SKA2-205ENST00000580541 LCE2AQ5TA79 106 aaPredicted RBP9.5□□□□□ -0.89
SKA2-205ENST00000580541 PET117Q6UWS5 81 aa9.5□□□□□ -0.89
SKA2-205ENST00000580541 SPATA12Q7Z6I5 190 aa9.5□□□□□ -0.89
SKA2-205ENST00000580541 LINC01561Q8N1V8 128 aa9.5□□□□□ -0.89
SKA2-205ENST00000580541 IGHV3OR16-9A0A0B4J2B5 98 aa9.49□□□□□ -0.89
SKA2-205ENST00000580541 A0A0J9YXV3 536 aa9.49□□□□□ -0.89
SKA2-205ENST00000580541 C20orf202A1L168 122 aa9.49□□□□□ -0.89
SKA2-205ENST00000580541 F8VRH5 84 aa9.49□□□□□ -0.89
SKA2-205ENST00000580541 SYS1-DBNDD2H3BUS1 97 aa9.49□□□□□ -0.89
SKA2-205ENST00000580541 KRTAP26-1Q6PEX3 210 aa9.49□□□□□ -0.89
SKA2-205ENST00000580541 TMA7Q9Y2S6 64 aaKnown RBP9.49□□□□□ -0.89
SKA2-205ENST00000580541 A0A087WZ39 114 aa9.48□□□□□ -0.89
SKA2-205ENST00000580541 IGHV1-58A0A0C4DH39 117 aa9.48□□□□□ -0.89
SKA2-205ENST00000580541 RTL8CO15255 209 aa9.48□□□□□ -0.89
SKA2-205ENST00000580541 IGLC3P0DOY3 106 aa9.48□□□□□ -0.89
SKA2-205ENST00000580541 PLNP26678 52 aa9.48□□□□□ -0.89
SKA2-205ENST00000580541 KRTDAPP60985 99 aa9.48□□□□□ -0.89
SKA2-205ENST00000580541 LINC00469Q8N7U9 141 aa9.48□□□□□ -0.89
SKA2-205ENST00000580541 HIST1H2BLQ99880 126 aa9.48□□□□□ -0.89
SKA2-205ENST00000580541 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
SKA2-205ENST00000580541 CHAC1Q9BUX1 264 aa9.47□□□□□ -0.89
SKA2-205ENST00000580541 DPM2O94777 84 aa9.46□□□□□ -0.9
SKA2-205ENST00000580541 C3orf79P0CE67 100 aa9.46□□□□□ -0.9
SKA2-205ENST00000580541 COX6A2Q02221 97 aa9.46□□□□□ -0.9
SKA2-205ENST00000580541 ODF1Q14990 250 aa9.46□□□□□ -0.9
SKA2-205ENST00000580541 MRPL35Q9NZE8 188 aaKnown RBP9.46□□□□□ -0.9
SKA2-205ENST00000580541 SACSQ9NZJ4 4579 aa9.46□□□□□ -0.9
SKA2-205ENST00000580541 IGLV5-45A0A087WSX0 123 aa9.45□□□□□ -0.9
SKA2-205ENST00000580541 A0A087WTM6 91 aa9.45□□□□□ -0.9
SKA2-205ENST00000580541 USP17L23D6RBM5 183 aa9.45□□□□□ -0.9
SKA2-205ENST00000580541 TMEM170BQ5T4T1 132 aa9.45□□□□□ -0.9
SKA2-205ENST00000580541 MAPKAPK5-AS1Q8N8E1 139 aa9.45□□□□□ -0.9
SKA2-205ENST00000580541 CDKN2A-AS1Q9UH64 79 aa9.45□□□□□ -0.9
SKA2-205ENST00000580541 IGLV4-69A0A075B6H9 119 aa9.44□□□□□ -0.9
SKA2-205ENST00000580541 LRCOL1A6NCL2 159 aa9.44□□□□□ -0.9
SKA2-205ENST00000580541 ZNF561-AS1K7EIQ3 104 aa9.44□□□□□ -0.9
SKA2-205ENST00000580541 IGKCP01834 107 aa9.44□□□□□ -0.9
SKA2-205ENST00000580541 OR10D4PQ8NGN7 298 aa9.44□□□□□ -0.9
SKA2-205ENST00000580541 IGHV3-64A0A075B6Q5 118 aa9.43□□□□□ -0.9
SKA2-205ENST00000580541 F8WDY8 70 aa9.43□□□□□ -0.9
SKA2-205ENST00000580541 PRSS2P07478 247 aa9.43□□□□□ -0.9
SKA2-205ENST00000580541 TNP2Q05952 138 aa9.43□□□□□ -0.9
SKA2-205ENST00000580541 LINC01545Q5VT33 79 aa9.43□□□□□ -0.9
SKA2-205ENST00000580541 hDV102S1A0JD36 115 aa9.42□□□□□ -0.9
SKA2-205ENST00000580541 C11orf86A6NJI1 115 aa9.42□□□□□ -0.9
SKA2-205ENST00000580541 HERVK_113P61574 105 aa9.42□□□□□ -0.9
SKA2-205ENST00000580541 KMT2CQ8NEZ4 4911 aaKnown RBP9.42□□□□□ -0.9
SKA2-205ENST00000580541 GVQW2A0A096LPI5 108 aaPredicted RBP9.41□□□□□ -0.9
SKA2-205ENST00000580541 LECT2O14960 151 aa9.41□□□□□ -0.9
SKA2-205ENST00000580541 ZNF22P17026 224 aaPredicted RBP9.41□□□□□ -0.9
SKA2-205ENST00000580541 Q8N814 137 aa9.41□□□□□ -0.9
SKA2-205ENST00000580541 NTN5Q8WTR8 489 aaPredicted RBP9.41□□□□□ -0.9
SKA2-205ENST00000580541 ORAOV1Q8WV07 137 aa9.41□□□□□ -0.9
SKA2-205ENST00000580541 PGPEP1Q9NXJ5 209 aa9.41□□□□□ -0.9
SKA2-205ENST00000580541 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.4□□□□□ -0.9
SKA2-205ENST00000580541 C6orf226Q5I0X4 101 aa9.4□□□□□ -0.9
SKA2-205ENST00000580541 HYDINQ4G0P3 5121 aa9.4□□□□□ -0.91
SKA2-205ENST00000580541 SPAG11BQ08648 103 aa9.39□□□□□ -0.91
SKA2-205ENST00000580541 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
SKA2-205ENST00000580541 C2orf48Q96LS8 159 aa9.39□□□□□ -0.91
SKA2-205ENST00000580541 PMCHL2Q9BQD1 86 aa9.39□□□□□ -0.91
SKA2-205ENST00000580541 SCGB1D1O95968 90 aa9.38□□□□□ -0.91
SKA2-205ENST00000580541 SPINK8P0C7L1 97 aa9.38□□□□□ -0.91
SKA2-205ENST00000580541 CKS1BP61024 79 aa9.38□□□□□ -0.91
SKA2-205ENST00000580541 HIGD2BQ4VC39 106 aa9.38□□□□□ -0.91
SKA2-205ENST00000580541 SFTA2Q6UW10 78 aa9.38□□□□□ -0.91
SKA2-205ENST00000580541 Q8IZM0 81 aa9.38□□□□□ -0.91
SKA2-205ENST00000580541 TOMM7Q9P0U1 55 aa9.38□□□□□ -0.91
SKA2-205ENST00000580541 TMEM223A0PJW6 202 aa9.37□□□□□ -0.91
SKA2-205ENST00000580541 SMIM1B2RUZ4 78 aa9.37□□□□□ -0.91
SKA2-205ENST00000580541 CXCL5P42830 114 aa9.37□□□□□ -0.91
SKA2-205ENST00000580541 CDPF1Q6NVV7 123 aa9.37□□□□□ -0.91
SKA2-205ENST00000580541 PKIGQ9Y2B9 76 aa9.37□□□□□ -0.91
SKA2-205ENST00000580541 HSBP1L1C9JCN9 74 aa9.36□□□□□ -0.91
SKA2-205ENST00000580541 CNBPP62633 177 aaKnown RBP9.36□□□□□ -0.91
SKA2-205ENST00000580541 WFDC2Q14508 124 aa9.36□□□□□ -0.91
SKA2-205ENST00000580541 COX7B2Q8TF08 81 aa9.36□□□□□ -0.91
SKA2-205ENST00000580541 CAMK2N2Q96S95 79 aa9.36□□□□□ -0.91
SKA2-205ENST00000580541 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.35□□□□□ -0.91
SKA2-205ENST00000580541 IGLV5-39A0A0G2JS06 123 aa9.35□□□□□ -0.91
SKA2-205ENST00000580541 NDUFA1O15239 70 aa9.35□□□□□ -0.91
SKA2-205ENST00000580541 SYCNQ0VAF6 134 aa9.35□□□□□ -0.91
SKA2-205ENST00000580541 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
SKA2-205ENST00000580541 PLEKHB2Q96CS7 222 aa9.35□□□□□ -0.91
SKA2-205ENST00000580541 IGLV5-52A0A0A0MRZ9 124 aa9.34□□□□□ -0.91
SKA2-205ENST00000580541 RYR2Q92736 4967 aa9.33□□□□□ -0.92
SKA2-205ENST00000580541 LEPROTO15243 131 aa9.33□□□□□ -0.92
SKA2-205ENST00000580541 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
SKA2-205ENST00000580541 RNF151Q2KHN1 245 aa9.33□□□□□ -0.92
SKA2-205ENST00000580541 LCE2CQ5TA81 110 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms