RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 HIST1H2BOP23527 126 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 HIST1H2BBP33778 126 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 HIST1H2BDP58876 126 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 HIST1H2BCP62807 126 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 HIST2H2BEQ16778 126 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.65□□□□□ -0.38
LIMD2-209ENST00000580222 HIST1H2BHQ93079 126 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 HIST1H2BNQ99877 126 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 HIST1H2BMQ99879 126 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 C1orf43Q9BWL3 253 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 HSBP1O75506 76 aa12.64□□□□□ -0.39
LIMD2-209ENST00000580222 HBDP02042 147 aa12.64□□□□□ -0.39
LIMD2-209ENST00000580222 MRPS36P82909 103 aaKnown RBP12.64□□□□□ -0.39
LIMD2-209ENST00000580222 PMCHL1Q16048 86 aa12.64□□□□□ -0.39
LIMD2-209ENST00000580222 OPRPNQ99935 248 aaPredicted RBP12.64□□□□□ -0.39
LIMD2-209ENST00000580222 TM2D2Q9BX73 214 aa12.64□□□□□ -0.39
LIMD2-209ENST00000580222 IGLV10-54A0A075B6I4 117 aa12.63□□□□□ -0.39
LIMD2-209ENST00000580222 IGLV4-3A0A075B6K6 122 aa12.63□□□□□ -0.39
LIMD2-209ENST00000580222 LECT2O14960 151 aa12.63□□□□□ -0.39
LIMD2-209ENST00000580222 SERF1AO75920 110 aa12.63□□□□□ -0.39
LIMD2-209ENST00000580222 Q6ZN92 141 aa12.63□□□□□ -0.39
LIMD2-209ENST00000580222 TMEM141Q96I45 108 aa12.63□□□□□ -0.39
LIMD2-209ENST00000580222 SCGB3A1Q96QR1 104 aa12.63□□□□□ -0.39
LIMD2-209ENST00000580222 A0A096LNJ9 63 aa12.62□□□□□ -0.39
LIMD2-209ENST00000580222 TIMM17AQ99595 171 aa12.62□□□□□ -0.39
LIMD2-209ENST00000580222 COX11Q9Y6N1 276 aa12.62□□□□□ -0.39
LIMD2-209ENST00000580222 TRAV8-4A0A0B4J246 113 aa12.61□□□□□ -0.39
LIMD2-209ENST00000580222 IGIPA6NJ69 53 aa12.61□□□□□ -0.39
LIMD2-209ENST00000580222 NPSP0C0P6 89 aa12.61□□□□□ -0.39
LIMD2-209ENST00000580222 ERASQ7Z444 233 aa12.61□□□□□ -0.39
LIMD2-209ENST00000580222 CIRBP-AS1Q8TBR5 109 aa12.61□□□□□ -0.39
LIMD2-209ENST00000580222 CHAC1Q9BUX1 264 aa12.61□□□□□ -0.39
LIMD2-209ENST00000580222 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.6□□□□□ -0.39
LIMD2-209ENST00000580222 IFITM10A6NMD0 228 aa12.6□□□□□ -0.39
LIMD2-209ENST00000580222 LINC00310P59036 64 aa12.6□□□□□ -0.39
LIMD2-209ENST00000580222 TEX43Q6ZNM6 134 aa12.6□□□□□ -0.39
LIMD2-209ENST00000580222 TRAV13-1A0A0B4J241 112 aa12.59□□□□□ -0.39
LIMD2-209ENST00000580222 LINC00959A0A1B0GUT2 108 aa12.59□□□□□ -0.39
LIMD2-209ENST00000580222 SS18Q15532 418 aa12.59□□□□□ -0.39
LIMD2-209ENST00000580222 PAPPA-AS1Q5QFB9 102 aa12.59□□□□□ -0.39
LIMD2-209ENST00000580222 FAM104AQ969W3 186 aa12.59□□□□□ -0.39
LIMD2-209ENST00000580222 FAM19A2Q8N3H0 131 aa12.58□□□□□ -0.4
LIMD2-209ENST00000580222 C2orf88Q9BSF0 95 aa12.58□□□□□ -0.4
LIMD2-209ENST00000580222 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.57□□□□□ -0.4
LIMD2-209ENST00000580222 PDZD11Q5EBL8 140 aa12.57□□□□□ -0.4
LIMD2-209ENST00000580222 CHCHD10Q8WYQ3 142 aaPredicted RBP12.57□□□□□ -0.4
LIMD2-209ENST00000580222 VCX2Q9H322 139 aa12.57□□□□□ -0.4
LIMD2-209ENST00000580222 CCL25O15444 150 aa12.56□□□□□ -0.4
LIMD2-209ENST00000580222 GAGE12HA6NDE8 117 aa12.55□□□□□ -0.4
LIMD2-209ENST00000580222 NUPR1O60356 82 aa12.55□□□□□ -0.4
LIMD2-209ENST00000580222 ATP5LO75964 103 aa12.55□□□□□ -0.4
LIMD2-209ENST00000580222 XCL1P47992 114 aa12.55□□□□□ -0.4
LIMD2-209ENST00000580222 NDUFA6P56556 154 aa12.55□□□□□ -0.4
LIMD2-209ENST00000580222 ZC2HC1BQ5TFG8 222 aa12.55□□□□□ -0.4
LIMD2-209ENST00000580222 LINC00173Q6ZV60 143 aa12.55□□□□□ -0.4
LIMD2-209ENST00000580222 AMELXQ99217 191 aa12.55□□□□□ -0.4
LIMD2-209ENST00000580222 KRTAP26-1Q6PEX3 210 aa12.54□□□□□ -0.4
LIMD2-209ENST00000580222 BAALCQ8WXS3 180 aa12.54□□□□□ -0.4
LIMD2-209ENST00000580222 LEPROTL1O95214 131 aa12.51□□□□□ -0.41
LIMD2-209ENST00000580222 UBE2D1P51668 147 aa12.51□□□□□ -0.41
LIMD2-209ENST00000580222 COA6Q5JTJ3 125 aaKnown RBP12.51□□□□□ -0.41
LIMD2-209ENST00000580222 FOXI1Q12951 378 aa12.5□□□□□ -0.41
LIMD2-209ENST00000580222 PMVKQ15126 192 aa12.5□□□□□ -0.41
LIMD2-209ENST00000580222 CD164L2Q6UWJ8 174 aa12.5□□□□□ -0.41
LIMD2-209ENST00000580222 IFI27L1Q96BM0 104 aa12.5□□□□□ -0.41
LIMD2-209ENST00000580222 FABP4P15090 132 aa12.49□□□□□ -0.41
LIMD2-209ENST00000580222 RPL37AP61513 92 aaKnown RBP12.49□□□□□ -0.41
LIMD2-209ENST00000580222 PRSS1P07477 247 aa12.48□□□□□ -0.41
LIMD2-209ENST00000580222 CST9LQ9H4G1 147 aa12.48□□□□□ -0.41
LIMD2-209ENST00000580222 HSPB8Q9UJY1 196 aa12.48□□□□□ -0.41
LIMD2-209ENST00000580222 USP17L23D6RBM5 183 aa12.47□□□□□ -0.41
LIMD2-209ENST00000580222 S100A6P06703 90 aa12.47□□□□□ -0.41
LIMD2-209ENST00000580222 LINC00242Q5T6M2 205 aa12.47□□□□□ -0.41
LIMD2-209ENST00000580222 COX7A2LO14548 114 aa12.46□□□□□ -0.41
LIMD2-209ENST00000580222 SEC11AP67812 179 aa12.46□□□□□ -0.41
LIMD2-209ENST00000580222 A0A0J9YXV3 536 aa12.45□□□□□ -0.42
LIMD2-209ENST00000580222 MALP21145 153 aa12.45□□□□□ -0.42
LIMD2-209ENST00000580222 HERVK_113P63121 156 aa12.45□□□□□ -0.42
LIMD2-209ENST00000580222 ODF1Q14990 250 aa12.45□□□□□ -0.42
LIMD2-209ENST00000580222 C14orf177Q52M58 125 aa12.45□□□□□ -0.42
LIMD2-209ENST00000580222 FAM19A3Q7Z5A8 133 aa12.45□□□□□ -0.42
LIMD2-209ENST00000580222 C5orf38Q86SI9 138 aa12.45□□□□□ -0.42
LIMD2-209ENST00000580222 GEMIN7Q9H840 131 aaKnown RBP12.45□□□□□ -0.42
LIMD2-209ENST00000580222 H0Y8G0 127 aa12.44□□□□□ -0.42
LIMD2-209ENST00000580222 COX6A2Q02221 97 aa12.44□□□□□ -0.42
LIMD2-209ENST00000580222 IGHV3OR16-9A0A0B4J2B5 98 aa12.43□□□□□ -0.42
LIMD2-209ENST00000580222 CFAP161Q6P656 301 aa12.43□□□□□ -0.42
LIMD2-209ENST00000580222 PACRGQ96M98 296 aaPredicted RBP12.43□□□□□ -0.42
LIMD2-209ENST00000580222 TRAV12-1A0A0B4J245 112 aa12.42□□□□□ -0.42
LIMD2-209ENST00000580222 IGHV1-58A0A0C4DH39 117 aa12.42□□□□□ -0.42
LIMD2-209ENST00000580222 TINCRA0A1B0GVN0 87 aa12.42□□□□□ -0.42
LIMD2-209ENST00000580222 C15orf56Q8N910 161 aa12.42□□□□□ -0.42
LIMD2-209ENST00000580222 CHTOPQ9Y3Y2 248 aaKnown RBP12.42□□□□□ -0.42
LIMD2-209ENST00000580222 APOMO95445 188 aa12.41□□□□□ -0.42
LIMD2-209ENST00000580222 LINC00469Q8N7U9 141 aa12.41□□□□□ -0.42
LIMD2-209ENST00000580222 MAP1LC3CQ9BXW4 147 aa12.41□□□□□ -0.42
LIMD2-209ENST00000580222 IGLC3P0DOY3 106 aa12.4□□□□□ -0.42
LIMD2-209ENST00000580222 HIGD2BQ4VC39 106 aa12.4□□□□□ -0.42
LIMD2-209ENST00000580222 IGLV4-69A0A075B6H9 119 aa12.39□□□□□ -0.43
LIMD2-209ENST00000580222 A0A087WZ39 114 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms