RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.96□□□□□ -1.46
SMARCD2-208ENST00000580054 LEPROTL1O95214 131 aa5.95□□□□□ -1.46
SMARCD2-208ENST00000580054 NPSP0C0P6 89 aa5.95□□□□□ -1.46
SMARCD2-208ENST00000580054 ZNF25P17030 456 aaPredicted RBP5.95□□□□□ -1.46
SMARCD2-208ENST00000580054 C14orf177Q52M58 125 aa5.95□□□□□ -1.46
SMARCD2-208ENST00000580054 Q6ZN92 141 aa5.95□□□□□ -1.46
SMARCD2-208ENST00000580054 C20orf203Q8NBC4 194 aa5.95□□□□□ -1.46
SMARCD2-208ENST00000580054 PACRGQ96M98 296 aaPredicted RBP5.95□□□□□ -1.46
SMARCD2-208ENST00000580054 SCGB3A1Q96QR1 104 aa5.95□□□□□ -1.46
SMARCD2-208ENST00000580054 SPANXA1Q9NS26 97 aa5.95□□□□□ -1.46
SMARCD2-208ENST00000580054 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.94□□□□□ -1.46
SMARCD2-208ENST00000580054 SNRPEP62304 92 aaKnown RBP5.94□□□□□ -1.46
SMARCD2-208ENST00000580054 ERASQ7Z444 233 aa5.94□□□□□ -1.46
SMARCD2-208ENST00000580054 OR5A1Q8NGJ0 315 aa5.94□□□□□ -1.46
SMARCD2-208ENST00000580054 TOMM6Q96B49 74 aa5.94□□□□□ -1.46
SMARCD2-208ENST00000580054 TMEM141Q96I45 108 aa5.94□□□□□ -1.46
SMARCD2-208ENST00000580054 CHCHD7Q9BUK0 85 aa5.94□□□□□ -1.46
SMARCD2-208ENST00000580054 TIMM21Q9BVV7 248 aa5.94□□□□□ -1.46
SMARCD2-208ENST00000580054 C1orf43Q9BWL3 253 aa5.94□□□□□ -1.46
SMARCD2-208ENST00000580054 C5orf52A6NGY3 159 aa5.93□□□□□ -1.46
SMARCD2-208ENST00000580054 CRPP02741 224 aa5.93□□□□□ -1.46
SMARCD2-208ENST00000580054 NTM-AS1Q6ZSK4 140 aa5.93□□□□□ -1.46
SMARCD2-208ENST00000580054 FAM19A2Q8N3H0 131 aa5.93□□□□□ -1.46
SMARCD2-208ENST00000580054 URB1-AS1Q96HZ7 61 aa5.93□□□□□ -1.46
SMARCD2-208ENST00000580054 MAP1LC3CQ9BXW4 147 aa5.93□□□□□ -1.46
SMARCD2-208ENST00000580054 PYGO1Q9Y3Y4 419 aa5.93□□□□□ -1.46
SMARCD2-208ENST00000580054 CSDC2Q9Y534 153 aaKnown RBP5.93□□□□□ -1.46
SMARCD2-208ENST00000580054 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 A0A1B0GUV1 79 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 IGKV2-29A2NJV5 120 aaPredicted RBP5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 USP17L23D6RBM5 183 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 PRSS1P07477 247 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 FGF6P10767 208 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 FABP4P15090 132 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 AKR1D1P51857 326 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 GAGE6Q13070 117 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 PMCHL1Q16048 86 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 PDZD11Q5EBL8 140 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 ENHOQ6UWT2 76 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 MRPL52Q86TS9 123 aaKnown RBP5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 HIST3H2BBQ8N257 126 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 IFI27L1Q96BM0 104 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 TIMM17AQ99595 171 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 C2orf88Q9BSF0 95 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 VCX2Q9H322 139 aa5.92□□□□□ -1.46
SMARCD2-208ENST00000580054 NUPR1O60356 82 aa5.91□□□□□ -1.46
SMARCD2-208ENST00000580054 RPL39P62891 51 aaKnown RBP5.91□□□□□ -1.46
SMARCD2-208ENST00000580054 MPV17L2Q567V2 206 aa5.91□□□□□ -1.46
SMARCD2-208ENST00000580054 C20orf202A1L168 122 aa5.9□□□□□ -1.46
SMARCD2-208ENST00000580054 ANGP03950 147 aaKnown RBP5.9□□□□□ -1.46
SMARCD2-208ENST00000580054 LINC00310P59036 64 aa5.9□□□□□ -1.46
SMARCD2-208ENST00000580054 MRPS36P82909 103 aaKnown RBP5.9□□□□□ -1.46
SMARCD2-208ENST00000580054 TEX43Q6ZNM6 134 aa5.9□□□□□ -1.46
SMARCD2-208ENST00000580054 LINC01600Q96MT4 127 aa5.9□□□□□ -1.46
SMARCD2-208ENST00000580054 UBE2D4Q9Y2X8 147 aa5.9□□□□□ -1.46
SMARCD2-208ENST00000580054 MUC2Q02817 5179 aa5.9□□□□□ -1.47
SMARCD2-208ENST00000580054 IGIPA6NJ69 53 aa5.89□□□□□ -1.47
SMARCD2-208ENST00000580054 CCL25O15444 150 aa5.89□□□□□ -1.47
SMARCD2-208ENST00000580054 RBX1P62877 108 aa5.89□□□□□ -1.47
SMARCD2-208ENST00000580054 SEC11AP67812 179 aa5.89□□□□□ -1.47
SMARCD2-208ENST00000580054 ZNF664Q8N3J9 261 aa5.89□□□□□ -1.47
SMARCD2-208ENST00000580054 C9orf163Q8N9P6 203 aa5.89□□□□□ -1.47
SMARCD2-208ENST00000580054 HIST1H2BLQ99880 126 aa5.89□□□□□ -1.47
SMARCD2-208ENST00000580054 A0A096LNJ9 63 aa5.88□□□□□ -1.47
SMARCD2-208ENST00000580054 KRTDAPP60985 99 aa5.88□□□□□ -1.47
SMARCD2-208ENST00000580054 PMVKQ15126 192 aa5.88□□□□□ -1.47
SMARCD2-208ENST00000580054 SS18Q15532 418 aa5.88□□□□□ -1.47
SMARCD2-208ENST00000580054 MIAQ16674 131 aa5.88□□□□□ -1.47
SMARCD2-208ENST00000580054 CLPSL2Q6UWE3 100 aa5.88□□□□□ -1.47
SMARCD2-208ENST00000580054 PET117Q6UWS5 81 aa5.88□□□□□ -1.47
SMARCD2-208ENST00000580054 CDC42SE2Q9NRR3 84 aa5.88□□□□□ -1.47
SMARCD2-208ENST00000580054 IGLV4-3A0A075B6K6 122 aa5.87□□□□□ -1.47
SMARCD2-208ENST00000580054 TRAV12-1A0A0B4J245 112 aa5.87□□□□□ -1.47
SMARCD2-208ENST00000580054 IFITM10A6NMD0 228 aa5.87□□□□□ -1.47
SMARCD2-208ENST00000580054 H0Y8G0 127 aa5.87□□□□□ -1.47
SMARCD2-208ENST00000580054 SDIM1Q6ZPB5 146 aa5.87□□□□□ -1.47
SMARCD2-208ENST00000580054 TRAV8-4A0A0B4J246 113 aa5.86□□□□□ -1.47
SMARCD2-208ENST00000580054 A0A0J9YXV3 536 aa5.86□□□□□ -1.47
SMARCD2-208ENST00000580054 SYS1-DBNDD2H3BUS1 97 aa5.86□□□□□ -1.47
SMARCD2-208ENST00000580054 CHTF8P0CG12 524 aa5.86□□□□□ -1.47
SMARCD2-208ENST00000580054 CIRBPQ14011 172 aaKnown RBP5.86□□□□□ -1.47
SMARCD2-208ENST00000580054 KRTAP26-1Q6PEX3 210 aa5.86□□□□□ -1.47
SMARCD2-208ENST00000580054 Q6ZUT4 128 aa5.86□□□□□ -1.47
SMARCD2-208ENST00000580054 OR10D4PQ8NGN7 298 aa5.86□□□□□ -1.47
SMARCD2-208ENST00000580054 GEMIN7Q9H840 131 aaKnown RBP5.86□□□□□ -1.47
SMARCD2-208ENST00000580054 CHTOPQ9Y3Y2 248 aaKnown RBP5.86□□□□□ -1.47
SMARCD2-208ENST00000580054 IGLV4-60A0A075B6I1 120 aa5.85□□□□□ -1.47
SMARCD2-208ENST00000580054 IGKV3OR2-268A0A0C4DH90 116 aa5.85□□□□□ -1.47
SMARCD2-208ENST00000580054 C3orf79P0CE67 100 aa5.85□□□□□ -1.47
SMARCD2-208ENST00000580054 KRTAP10-8P60410 259 aa5.85□□□□□ -1.47
SMARCD2-208ENST00000580054 REG3AQ06141 175 aa5.85□□□□□ -1.47
SMARCD2-208ENST00000580054 LINC00269Q8N2A0 174 aa5.85□□□□□ -1.47
SMARCD2-208ENST00000580054 AMELXQ99217 191 aa5.85□□□□□ -1.47
SMARCD2-208ENST00000580054 CST9LQ9H4G1 147 aa5.85□□□□□ -1.47
SMARCD2-208ENST00000580054 PRR34Q9NV39 138 aa5.85□□□□□ -1.47
SMARCD2-208ENST00000580054 A0A087WYN8 130 aa5.84□□□□□ -1.47
SMARCD2-208ENST00000580054 TRAV13-1A0A0B4J241 112 aa5.84□□□□□ -1.47
SMARCD2-208ENST00000580054 hDV102S1A0JD36 115 aa5.84□□□□□ -1.47
SMARCD2-208ENST00000580054 F8VRH5 84 aa5.84□□□□□ -1.47
SMARCD2-208ENST00000580054 SCGB1D1O95968 90 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms