RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
COPS3-216ENST00000579716 Q5W150 140 aa4.07□□□□□ -1.76
COPS3-216ENST00000579716 FDCSPQ8NFU4 85 aa4.07□□□□□ -1.76
COPS3-216ENST00000579716 PRR34Q9NV39 138 aa4.07□□□□□ -1.76
COPS3-216ENST00000579716 R4GMQ9 66 aa4.07□□□□□ -1.76
COPS3-216ENST00000579716 HEATR1Q9H583 2144 aaKnown RBP4.06□□□□□ -1.76
COPS3-216ENST00000579716 F8VRH5 84 aa4.06□□□□□ -1.76
COPS3-216ENST00000579716 FXYD6P3P58550 94 aa4.06□□□□□ -1.76
COPS3-216ENST00000579716 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
COPS3-216ENST00000579716 KRTAP25-1Q3LHN0 102 aa4.06□□□□□ -1.76
COPS3-216ENST00000579716 HIGD2BQ4VC39 106 aa4.06□□□□□ -1.76
COPS3-216ENST00000579716 GFRA4Q9GZZ7 299 aa4.06□□□□□ -1.76
COPS3-216ENST00000579716 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
COPS3-216ENST00000579716 COL4A1P02462 1669 aa4.06□□□□□ -1.76
COPS3-216ENST00000579716 MYO7AQ13402 2215 aa4.05□□□□□ -1.76
COPS3-216ENST00000579716 A0A096LNJ9 63 aa4.05□□□□□ -1.76
COPS3-216ENST00000579716 K7EMI3 77 aa4.05□□□□□ -1.76
COPS3-216ENST00000579716 ST20-AS1Q8NBB2 130 aa4.05□□□□□ -1.76
COPS3-216ENST00000579716 LINC00846Q9NV44 126 aa4.05□□□□□ -1.76
COPS3-216ENST00000579716 KLK12Q9UKR0 248 aa4.05□□□□□ -1.76
COPS3-216ENST00000579716 LMO7Q8WWI1 1683 aa4.05□□□□□ -1.76
COPS3-216ENST00000579716 MPDZO75970 2070 aa4.04□□□□□ -1.76
COPS3-216ENST00000579716 TRBV6-6A0A0A6YYG2 114 aa4.04□□□□□ -1.76
COPS3-216ENST00000579716 IGKV1-17P01599 117 aa4.04□□□□□ -1.76
COPS3-216ENST00000579716 CISD3P0C7P0 127 aa4.04□□□□□ -1.76
COPS3-216ENST00000579716 COX7B2Q8TF08 81 aa4.04□□□□□ -1.76
COPS3-216ENST00000579716 C4orf3Q8WVX3 66 aa4.04□□□□□ -1.76
COPS3-216ENST00000579716 OBSCN-AS1Q96MR7 158 aa4.04□□□□□ -1.76
COPS3-216ENST00000579716 NRAPQ86VF7 1730 aa4.04□□□□□ -1.76
COPS3-216ENST00000579716 LINC01546A6NGU7 62 aa4.03□□□□□ -1.76
COPS3-216ENST00000579716 CNBPP62633 177 aaKnown RBP4.03□□□□□ -1.76
COPS3-216ENST00000579716 PDE6HQ13956 83 aa4.03□□□□□ -1.76
COPS3-216ENST00000579716 ENHOQ6UWT2 76 aa4.03□□□□□ -1.76
COPS3-216ENST00000579716 PCDH15Q96QU1 1955 aa4.03□□□□□ -1.76
COPS3-216ENST00000579716 BAZ2BQ9UIF8 2168 aaKnown RBP4.03□□□□□ -1.76
COPS3-216ENST00000579716 IGKV3-7A0A075B6H7 116 aa4.02□□□□□ -1.77
COPS3-216ENST00000579716 FAM168BA1KXE4 195 aa4.02□□□□□ -1.77
COPS3-216ENST00000579716 M0R3E3 92 aa4.02□□□□□ -1.77
COPS3-216ENST00000579716 LINC00208Q96KT6 92 aa4.02□□□□□ -1.77
COPS3-216ENST00000579716 PLAC8Q9NZF1 115 aa4.02□□□□□ -1.77
COPS3-216ENST00000579716 MALRD1Q5VYJ5 2156 aa4.02□□□□□ -1.77
COPS3-216ENST00000579716 NRXN2Q9P2S2 1712 aa4.01□□□□□ -1.77
COPS3-216ENST00000579716 J3QRE1 110 aa4.01□□□□□ -1.77
COPS3-216ENST00000579716 M0R135 149 aa4.01□□□□□ -1.77
COPS3-216ENST00000579716 IGKV3-20P01619 116 aa4.01□□□□□ -1.77
COPS3-216ENST00000579716 MGPP08493 103 aa4.01□□□□□ -1.77
COPS3-216ENST00000579716 CCL3L1P16619 93 aa4.01□□□□□ -1.77
COPS3-216ENST00000579716 CCL18P55774 89 aa4.01□□□□□ -1.77
COPS3-216ENST00000579716 KRTAP24-1Q3LI83 254 aa4.01□□□□□ -1.77
COPS3-216ENST00000579716 TTTY12Q9BZ98 90 aa4.01□□□□□ -1.77
COPS3-216ENST00000579716 LCE6AA0A183 80 aa4□□□□□ -1.77
COPS3-216ENST00000579716 LRCOL1A6NCL2 159 aa4□□□□□ -1.77
COPS3-216ENST00000579716 UQCR11O14957 56 aa4□□□□□ -1.77
COPS3-216ENST00000579716 SPINK4O60575 86 aa4□□□□□ -1.77
COPS3-216ENST00000579716 TMEM14CQ9P0S9 112 aa4□□□□□ -1.77
COPS3-216ENST00000579716 ZNF831Q5JPB2 1677 aa4□□□□□ -1.77
COPS3-216ENST00000579716 NCOA6Q14686 2063 aaPredicted RBP3.99□□□□□ -1.77
COPS3-216ENST00000579716 TRAV21A0A0B4J279 112 aa3.99□□□□□ -1.77
COPS3-216ENST00000579716 H0Y9P7 68 aa3.99□□□□□ -1.77
COPS3-216ENST00000579716 TYMSOSQ8TAI1 123 aa3.99□□□□□ -1.77
COPS3-216ENST00000579716 HIGD2AQ9BW72 106 aa3.99□□□□□ -1.77
COPS3-216ENST00000579716 MYO7BQ6PIF6 2116 aa3.98□□□□□ -1.77
COPS3-216ENST00000579716 A0A0G2JMZ2 1700 aa3.98□□□□□ -1.77
COPS3-216ENST00000579716 LRRC37A2A6NM11 1700 aa3.98□□□□□ -1.77
COPS3-216ENST00000579716 LRRC37AA6NMS7 1700 aa3.98□□□□□ -1.77
COPS3-216ENST00000579716 JMJD7-PLA2G4BH0Y9G9 81 aa3.98□□□□□ -1.77
COPS3-216ENST00000579716 COX6B1P14854 86 aa3.98□□□□□ -1.77
COPS3-216ENST00000579716 C9orf163Q8N9P6 203 aa3.98□□□□□ -1.77
COPS3-216ENST00000579716 WFDC9Q8NEX5 89 aa3.98□□□□□ -1.77
COPS3-216ENST00000579716 TNRC6BQ9UPQ9 1833 aaKnown RBP3.98□□□□□ -1.77
COPS3-216ENST00000579716 FREM3P0C091 2139 aa3.97□□□□□ -1.77
COPS3-216ENST00000579716 TRBV6-1A0A0K0K1D8 114 aa3.97□□□□□ -1.77
COPS3-216ENST00000579716 TIMM8BQ9Y5J9 83 aaPredicted RBP3.97□□□□□ -1.77
COPS3-216ENST00000579716 C4AP0C0L4 1744 aa3.96□□□□□ -1.78
COPS3-216ENST00000579716 SDK2Q58EX2 2172 aa3.95□□□□□ -1.78
COPS3-216ENST00000579716 IGKV3D-15A0A087WSY6 115 aa3.95□□□□□ -1.78
COPS3-216ENST00000579716 TRAV40A0A0B4J280 105 aa3.95□□□□□ -1.78
COPS3-216ENST00000579716 M0R1W7 72 aa3.95□□□□□ -1.78
COPS3-216ENST00000579716 C10orf113Q5VZT2 155 aa3.95□□□□□ -1.78
COPS3-216ENST00000579716 PATE1Q8WXA2 126 aa3.95□□□□□ -1.78
COPS3-216ENST00000579716 SPTBP11277 2137 aa3.95□□□□□ -1.78
COPS3-216ENST00000579716 HEATR5BQ9P2D3 2071 aa3.94□□□□□ -1.78
COPS3-216ENST00000579716 ZGRF1Q86YA3 2104 aa3.94□□□□□ -1.78
COPS3-216ENST00000579716 A0A1W2PNU3 283 aaPredicted RBP3.94□□□□□ -1.78
COPS3-216ENST00000579716 IGIPA6NJ69 53 aa3.94□□□□□ -1.78
COPS3-216ENST00000579716 I3L3M4 83 aa3.94□□□□□ -1.78
COPS3-216ENST00000579716 MRGPRG-AS1Q2M3A8 158 aa3.94□□□□□ -1.78
COPS3-216ENST00000579716 HCP5Q6MZN7 132 aa3.94□□□□□ -1.78
COPS3-216ENST00000579716 ZCCHC13Q8WW36 166 aaKnown RBP3.94□□□□□ -1.78
COPS3-216ENST00000579716 WFDC10AQ9H1F0 79 aa3.94□□□□□ -1.78
COPS3-216ENST00000579716 TMEM167BQ9NRX6 74 aa3.94□□□□□ -1.78
COPS3-216ENST00000579716 PSORS1C2Q9UIG4 136 aa3.94□□□□□ -1.78
COPS3-216ENST00000579716 DIDO1Q9BTC0 2240 aaKnown RBP3.94□□□□□ -1.78
COPS3-216ENST00000579716 PDE6GP18545 87 aa3.93□□□□□ -1.78
COPS3-216ENST00000579716 PI4KAP42356 2102 aa3.93□□□□□ -1.78
COPS3-216ENST00000579716 FXYD3Q14802 87 aa3.93□□□□□ -1.78
COPS3-216ENST00000579716 KIAA0100Q14667 2235 aaKnown RBP3.93□□□□□ -1.78
COPS3-216ENST00000579716 KIF26BQ2KJY2 2108 aa3.92□□□□□ -1.78
COPS3-216ENST00000579716 CTSGP08311 255 aa3.92□□□□□ -1.78
COPS3-216ENST00000579716 ZNF137PP52743 207 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms