RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 Q6ZQT0 140 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 Q6ZTC4 211 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 LINC00337Q8N6G1 96 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 COX7B2Q8TF08 81 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 RMI2Q96E14 147 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 TM2D3Q9BRN9 247 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 RHPN1-AS1Q9BWJ2 59 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 LINC00474Q9P2X8 69 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 EPOPA6NHQ4 379 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 RPL37AP8A6NKH3 93 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 BPY2O14599 106 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 UBE2L6O14933 153 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 LMO4P61968 165 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 UBE2BP63146 152 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 HAMPP81172 84 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 BSPH1Q075Z2 132 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 NREPQ16612 68 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 NTM-AS1Q6ZSK4 140 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 BPESC1Q9GZL8 116 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 CDC42SE2Q9NRR3 84 aa4.03□□□□□ -1.76
DDX42-210ENST00000579539 MYO7AQ13402 2215 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 ARFGEF3Q5TH69 2177 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 E7EQL1 145 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 CCL18P55774 89 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 COX6A2Q02221 97 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 SS18Q15532 418 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 ATP11AUNQ6ZP68 121 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 PHF5AQ7RTV0 110 aaKnown RBP4.02□□□□□ -1.77
DDX42-210ENST00000579539 Q8NBF4 154 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 CYP4F30PQ9H0H9 118 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 RETNQ9HD89 108 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 SNURFQ9Y675 71 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 CNTRLQ7Z7A1 2325 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 DSCAMO60469 2012 aa4.02□□□□□ -1.77
DDX42-210ENST00000579539 ASCC3Q8N3C0 2202 aaKnown RBP4.02□□□□□ -1.77
DDX42-210ENST00000579539 KNL1Q8NG31 2342 aa4.01□□□□□ -1.77
DDX42-210ENST00000579539 IGHV3OR16-13A0A075B7E8 117 aa4.01□□□□□ -1.77
DDX42-210ENST00000579539 IGHV3OR16-8A0A075B7F1 116 aa4.01□□□□□ -1.77
DDX42-210ENST00000579539 IGHV3-74A0A0B4J1X5 117 aa4.01□□□□□ -1.77
DDX42-210ENST00000579539 TRAV10A0A0B4J240 114 aa4.01□□□□□ -1.77
DDX42-210ENST00000579539 hDV103S1A0JD37 113 aa4.01□□□□□ -1.77
DDX42-210ENST00000579539 LY6HO94772 140 aa4.01□□□□□ -1.77
DDX42-210ENST00000579539 LIMD2Q9BT23 127 aa4.01□□□□□ -1.77
DDX42-210ENST00000579539 PRR14LQ5THK1 2151 aa4.01□□□□□ -1.77
DDX42-210ENST00000579539 BRWD1Q9NSI6 2320 aa4.01□□□□□ -1.77
DDX42-210ENST00000579539 ASXL3Q9C0F0 2248 aa4.01□□□□□ -1.77
DDX42-210ENST00000579539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4□□□□□ -1.77
DDX42-210ENST00000579539 IGHV3-49A0A0A0MS15 119 aa4□□□□□ -1.77
DDX42-210ENST00000579539 A8MTW9 85 aa4□□□□□ -1.77
DDX42-210ENST00000579539 ELOF1P60002 83 aaKnown RBP4□□□□□ -1.77
DDX42-210ENST00000579539 C9orf129Q5T035 196 aaKnown RBP4□□□□□ -1.77
DDX42-210ENST00000579539 UNQ9165/PRO28630Q6UXU0 137 aa4□□□□□ -1.77
DDX42-210ENST00000579539 LINC00575Q6W349 94 aa4□□□□□ -1.77
DDX42-210ENST00000579539 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
DDX42-210ENST00000579539 C5orf56Q8N8D9 126 aa4□□□□□ -1.77
DDX42-210ENST00000579539 FAM215AQ9Y5M1 114 aa4□□□□□ -1.77
DDX42-210ENST00000579539 NAV3Q8IVL0 2385 aa3.99□□□□□ -1.77
DDX42-210ENST00000579539 UBE2AP49459 152 aa3.99□□□□□ -1.77
DDX42-210ENST00000579539 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.99□□□□□ -1.77
DDX42-210ENST00000579539 FDCSPQ8NFU4 85 aa3.99□□□□□ -1.77
DDX42-210ENST00000579539 PRRC2AP48634 2157 aaKnown RBP3.98□□□□□ -1.77
DDX42-210ENST00000579539 DOCK10Q96BY6 2186 aa3.98□□□□□ -1.77
DDX42-210ENST00000579539 TRBV6-8A0A0A6YYG3 113 aa3.98□□□□□ -1.77
DDX42-210ENST00000579539 LCE6AA0A183 80 aa3.98□□□□□ -1.77
DDX42-210ENST00000579539 LPAL2Q16609 132 aa3.98□□□□□ -1.77
DDX42-210ENST00000579539 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.98□□□□□ -1.77
DDX42-210ENST00000579539 WFDC9Q8NEX5 89 aa3.98□□□□□ -1.77
DDX42-210ENST00000579539 NACAE9PAV3 2078 aa3.98□□□□□ -1.77
DDX42-210ENST00000579539 G3V318 75 aa3.97□□□□□ -1.77
DDX42-210ENST00000579539 Q8IZM0 81 aa3.97□□□□□ -1.77
DDX42-210ENST00000579539 C11orf72Q8NBR9 251 aa3.97□□□□□ -1.77
DDX42-210ENST00000579539 IGLV7-46A0A075B6I9 117 aa3.96□□□□□ -1.78
DDX42-210ENST00000579539 IGKV2D-30A0A075B6S6 120 aa3.96□□□□□ -1.78
DDX42-210ENST00000579539 IGHV3OR16-9A0A0B4J2B5 98 aa3.96□□□□□ -1.78
DDX42-210ENST00000579539 COX7BP24311 80 aa3.96□□□□□ -1.78
DDX42-210ENST00000579539 RNASE13Q5GAN3 156 aaKnown RBP3.96□□□□□ -1.78
DDX42-210ENST00000579539 SPATA3Q8NHX4 192 aa3.96□□□□□ -1.78
DDX42-210ENST00000579539 DEFB104AQ8WTQ1 72 aa3.96□□□□□ -1.78
DDX42-210ENST00000579539 CHCHD10Q8WYQ3 142 aaPredicted RBP3.96□□□□□ -1.78
DDX42-210ENST00000579539 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
DDX42-210ENST00000579539 LINC00588Q9Y4M8 146 aa3.96□□□□□ -1.78
DDX42-210ENST00000579539 ZGRF1Q86YA3 2104 aa3.95□□□□□ -1.78
DDX42-210ENST00000579539 H3BPC8 53 aa3.95□□□□□ -1.78
DDX42-210ENST00000579539 M0R378 163 aa3.95□□□□□ -1.78
DDX42-210ENST00000579539 CMC4P56277 68 aaPredicted RBP3.95□□□□□ -1.78
DDX42-210ENST00000579539 Q6ZTI0 123 aa3.95□□□□□ -1.78
DDX42-210ENST00000579539 DHRS4-AS1Q9P1J3 65 aa3.95□□□□□ -1.78
DDX42-210ENST00000579539 COL27A1Q8IZC6 1860 aaPredicted RBP3.94□□□□□ -1.78
DDX42-210ENST00000579539 TRAV22A0A0B4J277 110 aa3.94□□□□□ -1.78
DDX42-210ENST00000579539 SPINK13Q1W4C9 94 aa3.94□□□□□ -1.78
DDX42-210ENST00000579539 FBXL19-AS1Q494R0 122 aa3.94□□□□□ -1.78
DDX42-210ENST00000579539 TMEM105Q8N8V8 129 aa3.94□□□□□ -1.78
DDX42-210ENST00000579539 C1orf64Q8NEQ6 169 aa3.94□□□□□ -1.78
DDX42-210ENST00000579539 UTRNP46939 3433 aa3.94□□□□□ -1.78
DDX42-210ENST00000579539 IGHV3-73A0A0B4J1V6 119 aa3.93□□□□□ -1.78
DDX42-210ENST00000579539 A0A1W2PNU3 283 aaPredicted RBP3.93□□□□□ -1.78
DDX42-210ENST00000579539 IGHV3-11P01762 117 aa3.93□□□□□ -1.78
DDX42-210ENST00000579539 SYCNQ0VAF6 134 aa3.93□□□□□ -1.78
DDX42-210ENST00000579539 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
DDX42-210ENST00000579539 FAM229BQ4G0N7 80 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms