RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 ALKBH7Q9BT30 221 aaPredicted RBP15.34■□□□□ 0.05
LIMD2-207ENST00000579329 MRPL18Q9H0U6 180 aaKnown RBP15.34■□□□□ 0.05
LIMD2-207ENST00000579329 G0S2P27469 103 aa15.33■□□□□ 0.04
LIMD2-207ENST00000579329 FABP9Q0Z7S8 132 aa15.33■□□□□ 0.04
LIMD2-207ENST00000579329 APOMO95445 188 aa15.32■□□□□ 0.04
LIMD2-207ENST00000579329 TEX43Q6ZNM6 134 aa15.32■□□□□ 0.04
LIMD2-207ENST00000579329 PRSS3P2Q8NHM4 247 aa15.32■□□□□ 0.04
LIMD2-207ENST00000579329 LINC00526Q96FQ7 95 aa15.32■□□□□ 0.04
LIMD2-207ENST00000579329 TGIF2-C20orf24A0A0A6YYL0 155 aa15.31■□□□□ 0.04
LIMD2-207ENST00000579329 PANO1I0J062 215 aa15.31■□□□□ 0.04
LIMD2-207ENST00000579329 NPSP0C0P6 89 aa15.31■□□□□ 0.04
LIMD2-207ENST00000579329 CIRBPQ14011 172 aaKnown RBP15.31■□□□□ 0.04
LIMD2-207ENST00000579329 Q6ZN92 141 aa15.31■□□□□ 0.04
LIMD2-207ENST00000579329 PLA2G1BP04054 148 aaKnown RBP15.3■□□□□ 0.04
LIMD2-207ENST00000579329 CARD19Q96LW7 228 aa15.3■□□□□ 0.04
LIMD2-207ENST00000579329 IGHV3OR16-9A0A0B4J2B5 98 aa15.29■□□□□ 0.04
LIMD2-207ENST00000579329 COX6A2Q02221 97 aa15.29■□□□□ 0.04
LIMD2-207ENST00000579329 SYCNQ0VAF6 134 aa15.29■□□□□ 0.04
LIMD2-207ENST00000579329 C2orf88Q9BSF0 95 aa15.29■□□□□ 0.04
LIMD2-207ENST00000579329 PKIGQ9Y2B9 76 aa15.29■□□□□ 0.04
LIMD2-207ENST00000579329 IGLV4-69A0A075B6H9 119 aa15.28■□□□□ 0.04
LIMD2-207ENST00000579329 IGIPA6NJ69 53 aa15.28■□□□□ 0.04
LIMD2-207ENST00000579329 CHTF8P0CG12 524 aa15.27■□□□□ 0.04
LIMD2-207ENST00000579329 TOMM6Q96B49 74 aa15.27■□□□□ 0.04
LIMD2-207ENST00000579329 VCX2Q9H322 139 aa15.27■□□□□ 0.04
LIMD2-207ENST00000579329 TRAPPC1Q9Y5R8 145 aa15.27■□□□□ 0.04
LIMD2-207ENST00000579329 PAPPA-AS1Q5QFB9 102 aa15.26■□□□□ 0.03
LIMD2-207ENST00000579329 OR10D4PQ8NGN7 298 aa15.26■□□□□ 0.03
LIMD2-207ENST00000579329 SPACA4Q8TDM5 124 aa15.26■□□□□ 0.03
LIMD2-207ENST00000579329 DPH3Q96FX2 82 aa15.26■□□□□ 0.03
LIMD2-207ENST00000579329 C2orf48Q96LS8 159 aa15.26■□□□□ 0.03
LIMD2-207ENST00000579329 AMELXQ99217 191 aa15.26■□□□□ 0.03
LIMD2-207ENST00000579329 LINC01546A6NGU7 62 aa15.25■□□□□ 0.03
LIMD2-207ENST00000579329 UBE2D1P51668 147 aa15.25■□□□□ 0.03
LIMD2-207ENST00000579329 SPAG11BQ08648 103 aa15.25■□□□□ 0.03
LIMD2-207ENST00000579329 LINC00242Q5T6M2 205 aa15.25■□□□□ 0.03
LIMD2-207ENST00000579329 LINC00173Q6ZV60 143 aa15.25■□□□□ 0.03
LIMD2-207ENST00000579329 TIMM17AQ99595 171 aa15.25■□□□□ 0.03
LIMD2-207ENST00000579329 SRRM2Q9UQ35 2752 aaKnown RBP15.25■□□□□ 0.03
LIMD2-207ENST00000579329 FA2HQ7L5A8 372 aa15.24■□□□□ 0.03
LIMD2-207ENST00000579329 ORAOV1Q8WV07 137 aa15.24■□□□□ 0.03
LIMD2-207ENST00000579329 CAMK2N2Q96S95 79 aa15.24■□□□□ 0.03
LIMD2-207ENST00000579329 LINC01549A6NIU2 74 aa15.23■□□□□ 0.03
LIMD2-207ENST00000579329 ZC2HC1BQ5TFG8 222 aa15.23■□□□□ 0.03
LIMD2-207ENST00000579329 SMCO4Q9NRQ5 59 aa15.23■□□□□ 0.03
LIMD2-207ENST00000579329 IGKV2-24A0A0C4DH68 120 aa15.22■□□□□ 0.03
LIMD2-207ENST00000579329 Q6ZRU5 148 aa15.22■□□□□ 0.03
LIMD2-207ENST00000579329 A0A087WYN8 130 aa15.21■□□□□ 0.03
LIMD2-207ENST00000579329 A0A087WZ39 114 aa15.21■□□□□ 0.03
LIMD2-207ENST00000579329 ERASQ7Z444 233 aa15.21■□□□□ 0.03
LIMD2-207ENST00000579329 SCGB3A1Q96QR1 104 aa15.21■□□□□ 0.03
LIMD2-207ENST00000579329 A0A096LNI7 61 aa15.2■□□□□ 0.02
LIMD2-207ENST00000579329 MAJINQ3KP22 176 aa15.2■□□□□ 0.02
LIMD2-207ENST00000579329 F8WDY8 70 aa15.19■□□□□ 0.02
LIMD2-207ENST00000579329 PLAC8Q9NZF1 115 aa15.19■□□□□ 0.02
LIMD2-207ENST00000579329 LINC00474Q9P2X8 69 aa15.19■□□□□ 0.02
LIMD2-207ENST00000579329 FAM19A3Q7Z5A8 133 aa15.18■□□□□ 0.02
LIMD2-207ENST00000579329 YPEL4Q96NS1 127 aa15.18■□□□□ 0.02
LIMD2-207ENST00000579329 LOC107984640A0A0U1RRK4 108 aa15.17■□□□□ 0.02
LIMD2-207ENST00000579329 SEC11AP67812 179 aa15.17■□□□□ 0.02
LIMD2-207ENST00000579329 LINC01561Q8N1V8 128 aa15.17■□□□□ 0.02
LIMD2-207ENST00000579329 C18orf32Q8TCD1 76 aa15.17■□□□□ 0.02
LIMD2-207ENST00000579329 RPL37AP61513 92 aaKnown RBP15.16■□□□□ 0.02
LIMD2-207ENST00000579329 SLC7A5P1Q8MH63 180 aa15.16■□□□□ 0.02
LIMD2-207ENST00000579329 NDUFA1O15239 70 aa15.15■□□□□ 0.02
LIMD2-207ENST00000579329 KRTAP10-4P60372 401 aaPredicted RBP15.15■□□□□ 0.02
LIMD2-207ENST00000579329 RNF151Q2KHN1 245 aa15.15■□□□□ 0.02
LIMD2-207ENST00000579329 HERVK_113P63121 156 aa15.14■□□□□ 0.01
LIMD2-207ENST00000579329 STPG4Q8N801 248 aa15.14■□□□□ 0.01
LIMD2-207ENST00000579329 MRPL35Q9NZE8 188 aaKnown RBP15.14■□□□□ 0.01
LIMD2-207ENST00000579329 CBLN2Q8IUK8 224 aa15.13■□□□□ 0.01
LIMD2-207ENST00000579329 LINC00614P0C842 121 aa15.12■□□□□ 0.01
LIMD2-207ENST00000579329 PTTG1IPP53801 180 aa15.12■□□□□ 0.01
LIMD2-207ENST00000579329 GAGE2BQ13066 116 aa15.12■□□□□ 0.01
LIMD2-207ENST00000579329 URB1-AS1Q96HZ7 61 aa15.12■□□□□ 0.01
LIMD2-207ENST00000579329 GEMIN7Q9H840 131 aaKnown RBP15.12■□□□□ 0.01
LIMD2-207ENST00000579329 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.11■□□□□ 0.01
LIMD2-207ENST00000579329 RAB5BP61020 215 aa15.11■□□□□ 0.01
LIMD2-207ENST00000579329 KIAA0087Q14695 138 aa15.11■□□□□ 0.01
LIMD2-207ENST00000579329 A0A0J9YXV3 536 aa15.09■□□□□ 0.01
LIMD2-207ENST00000579329 RPL18AQ02543 176 aaKnown RBP15.09■□□□□ 0.01
LIMD2-207ENST00000579329 A0A096LNJ9 63 aa15.08■□□□□ 0
LIMD2-207ENST00000579329 HBDP02042 147 aa15.08■□□□□ 0
LIMD2-207ENST00000579329 PMVKQ15126 192 aa15.08■□□□□ 0
LIMD2-207ENST00000579329 C10orf25Q5T742 122 aa15.08■□□□□ 0
LIMD2-207ENST00000579329 UNQ6190/PRO20217Q6UXQ8 127 aa15.08■□□□□ 0
LIMD2-207ENST00000579329 C7orf33Q8WU49 177 aa15.08■□□□□ 0
LIMD2-207ENST00000579329 CST9LQ9H4G1 147 aa15.08■□□□□ 0
LIMD2-207ENST00000579329 CDKN2A-AS1Q9UH64 79 aa15.08■□□□□ 0
LIMD2-207ENST00000579329 PACRGQ96M98 296 aaPredicted RBP15.07■□□□□ 0
LIMD2-207ENST00000579329 C6orf48Q9UBA6 75 aa15.07■□□□□ 0
LIMD2-207ENST00000579329 TINCRA0A1B0GVN0 87 aa15.06■□□□□ 0
LIMD2-207ENST00000579329 J3QL48 77 aa15.06■□□□□ 0
LIMD2-207ENST00000579329 PRSS2P07478 247 aa15.06■□□□□ 0
LIMD2-207ENST00000579329 LINC00469Q8N7U9 141 aa15.05■□□□□ -0
LIMD2-207ENST00000579329 TOMM7Q9P0U1 55 aa15.05■□□□□ -0
LIMD2-207ENST00000579329 TRBV30A0A0K0K1B3 111 aa15.04■□□□□ -0
LIMD2-207ENST00000579329 C2orf82Q6UX34 121 aa15.04■□□□□ -0
LIMD2-207ENST00000579329 Q8IZM0 81 aa15.04■□□□□ -0
LIMD2-207ENST00000579329 TLX1NBP0CAT3 122 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms