RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 CARD19Q96LW7 228 aa10.43□□□□□ -0.74
CDK5RAP3-206ENST00000578018 SMCO4Q9NRQ5 59 aa10.43□□□□□ -0.74
CDK5RAP3-206ENST00000578018 SS18Q15532 418 aa10.42□□□□□ -0.74
CDK5RAP3-206ENST00000578018 CD164L2Q6UWJ8 174 aa10.42□□□□□ -0.74
CDK5RAP3-206ENST00000578018 ZNF664Q8N3J9 261 aa10.42□□□□□ -0.74
CDK5RAP3-206ENST00000578018 PKIGQ9Y2B9 76 aa10.42□□□□□ -0.74
CDK5RAP3-206ENST00000578018 FCER1GP30273 86 aa10.41□□□□□ -0.74
CDK5RAP3-206ENST00000578018 MAP1LC3AQ9H492 121 aa10.41□□□□□ -0.74
CDK5RAP3-206ENST00000578018 LINC00474Q9P2X8 69 aa10.41□□□□□ -0.74
CDK5RAP3-206ENST00000578018 KIAA1644Q3SXP7 199 aa10.4□□□□□ -0.74
CDK5RAP3-206ENST00000578018 Q8N8P6 123 aa10.4□□□□□ -0.74
CDK5RAP3-206ENST00000578018 MRPL18Q9H0U6 180 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-206ENST00000578018 K7EMI3 77 aa10.39□□□□□ -0.75
CDK5RAP3-206ENST00000578018 SYCNQ0VAF6 134 aa10.39□□□□□ -0.75
CDK5RAP3-206ENST00000578018 ALKBH7Q9BT30 221 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-206ENST00000578018 ZNF561-AS1K7EIQ3 104 aa10.38□□□□□ -0.75
CDK5RAP3-206ENST00000578018 FABP9Q0Z7S8 132 aa10.38□□□□□ -0.75
CDK5RAP3-206ENST00000578018 CBLN2Q8IUK8 224 aa10.38□□□□□ -0.75
CDK5RAP3-206ENST00000578018 UBE2D4Q9Y2X8 147 aa10.38□□□□□ -0.75
CDK5RAP3-206ENST00000578018 CSDC2Q9Y534 153 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-206ENST00000578018 SMAGPQ0VAQ4 97 aa10.37□□□□□ -0.75
CDK5RAP3-206ENST00000578018 TMEM18Q96B42 140 aa10.37□□□□□ -0.75
CDK5RAP3-206ENST00000578018 TIMM21Q9BVV7 248 aa10.37□□□□□ -0.75
CDK5RAP3-206ENST00000578018 NXT2Q9NPJ8 142 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-206ENST00000578018 TRAPPC1Q9Y5R8 145 aa10.37□□□□□ -0.75
CDK5RAP3-206ENST00000578018 LOC389332A0A1B0GUA5 103 aa10.36□□□□□ -0.75
CDK5RAP3-206ENST00000578018 C1orf196B1AJZ1 125 aa10.36□□□□□ -0.75
CDK5RAP3-206ENST00000578018 RAB5AP20339 215 aa10.36□□□□□ -0.75
CDK5RAP3-206ENST00000578018 RNASE13Q5GAN3 156 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-206ENST00000578018 LINC01600Q96MT4 127 aa10.36□□□□□ -0.75
CDK5RAP3-206ENST00000578018 IGLV4-69A0A075B6H9 119 aa10.35□□□□□ -0.75
CDK5RAP3-206ENST00000578018 COX7A2LO14548 114 aa10.35□□□□□ -0.75
CDK5RAP3-206ENST00000578018 PTTG1IPP53801 180 aa10.35□□□□□ -0.75
CDK5RAP3-206ENST00000578018 LINC01546A6NGU7 62 aa10.34□□□□□ -0.75
CDK5RAP3-206ENST00000578018 MALP21145 153 aa10.34□□□□□ -0.75
CDK5RAP3-206ENST00000578018 IFI27P40305 119 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-206ENST00000578018 Q6ZUT4 128 aa10.34□□□□□ -0.75
CDK5RAP3-206ENST00000578018 TRAV13-1A0A0B4J241 112 aa10.33□□□□□ -0.76
CDK5RAP3-206ENST00000578018 LOC107984640A0A0U1RRK4 108 aa10.33□□□□□ -0.76
CDK5RAP3-206ENST00000578018 ORMDL2Q53FV1 153 aa10.33□□□□□ -0.76
CDK5RAP3-206ENST00000578018 COLCA2A8K830 154 aa10.32□□□□□ -0.76
CDK5RAP3-206ENST00000578018 GAGE2BQ13066 116 aa10.32□□□□□ -0.76
CDK5RAP3-206ENST00000578018 SPINK6Q6UWN8 80 aa10.32□□□□□ -0.76
CDK5RAP3-206ENST00000578018 CAMK2N2Q96S95 79 aa10.32□□□□□ -0.76
CDK5RAP3-206ENST00000578018 SPANXA1Q9NS26 97 aa10.32□□□□□ -0.76
CDK5RAP3-206ENST00000578018 PYGO1Q9Y3Y4 419 aa10.32□□□□□ -0.76
CDK5RAP3-206ENST00000578018 A0A0J9YXV3 536 aa10.31□□□□□ -0.76
CDK5RAP3-206ENST00000578018 APOMO95445 188 aa10.31□□□□□ -0.76
CDK5RAP3-206ENST00000578018 G0S2P27469 103 aa10.31□□□□□ -0.76
CDK5RAP3-206ENST00000578018 RPL39P62891 51 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-206ENST00000578018 Q6ZRP5 223 aa10.31□□□□□ -0.76
CDK5RAP3-206ENST00000578018 LRP2P98164 4655 aa10.31□□□□□ -0.76
CDK5RAP3-206ENST00000578018 MRPS36P82909 103 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-206ENST00000578018 C5orf38Q86SI9 138 aa10.3□□□□□ -0.76
CDK5RAP3-206ENST00000578018 FAM104AQ969W3 186 aa10.3□□□□□ -0.76
CDK5RAP3-206ENST00000578018 C2orf48Q96LS8 159 aa10.3□□□□□ -0.76
CDK5RAP3-206ENST00000578018 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-206ENST00000578018 SRSF9Q13242 221 aaKnown RBP eCLIP10.29□□□□□ -0.76
CDK5RAP3-206ENST00000578018 ODF1Q14990 250 aa10.29□□□□□ -0.76
CDK5RAP3-206ENST00000578018 REG3GQ6UW15 175 aa10.29□□□□□ -0.76
CDK5RAP3-206ENST00000578018 C18orf32Q8TCD1 76 aa10.29□□□□□ -0.76
CDK5RAP3-206ENST00000578018 A0A1W2PNN7 141 aa10.28□□□□□ -0.76
CDK5RAP3-206ENST00000578018 NPSP0C0P6 89 aa10.28□□□□□ -0.76
CDK5RAP3-206ENST00000578018 SPAG11BQ08648 103 aa10.28□□□□□ -0.76
CDK5RAP3-206ENST00000578018 CYSLTR1Q9Y271 337 aa10.28□□□□□ -0.76
CDK5RAP3-206ENST00000578018 LINC01549A6NIU2 74 aa10.27□□□□□ -0.77
CDK5RAP3-206ENST00000578018 S100A1P23297 94 aa10.27□□□□□ -0.77
CDK5RAP3-206ENST00000578018 KRTAP10-8P60410 259 aa10.27□□□□□ -0.77
CDK5RAP3-206ENST00000578018 C2orf66Q6UXQ4 117 aa10.27□□□□□ -0.77
CDK5RAP3-206ENST00000578018 IGIPA6NJ69 53 aa10.26□□□□□ -0.77
CDK5RAP3-206ENST00000578018 RPL18AQ02543 176 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-206ENST00000578018 FA2HQ7L5A8 372 aa10.26□□□□□ -0.77
CDK5RAP3-206ENST00000578018 OR10D4PQ8NGN7 298 aa10.26□□□□□ -0.77
CDK5RAP3-206ENST00000578018 TOMM6Q96B49 74 aa10.26□□□□□ -0.77
CDK5RAP3-206ENST00000578018 SCO1O75880 301 aa10.25□□□□□ -0.77
CDK5RAP3-206ENST00000578018 TRGC2P03986 189 aa10.25□□□□□ -0.77
CDK5RAP3-206ENST00000578018 LINC00614P0C842 121 aa10.25□□□□□ -0.77
CDK5RAP3-206ENST00000578018 RAB5BP61020 215 aa10.25□□□□□ -0.77
CDK5RAP3-206ENST00000578018 RNF151Q2KHN1 245 aa10.25□□□□□ -0.77
CDK5RAP3-206ENST00000578018 C9orf116Q5BN46 136 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-206ENST00000578018 URB1-AS1Q96HZ7 61 aa10.25□□□□□ -0.77
CDK5RAP3-206ENST00000578018 OPRPNQ99935 248 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-206ENST00000578018 IGLV4-3A0A075B6K6 122 aa10.24□□□□□ -0.77
CDK5RAP3-206ENST00000578018 IGHV3OR16-9A0A0B4J2B5 98 aa10.24□□□□□ -0.77
CDK5RAP3-206ENST00000578018 ORAOV1Q8WV07 137 aa10.24□□□□□ -0.77
CDK5RAP3-206ENST00000578018 TMEM141Q96I45 108 aa10.23□□□□□ -0.77
CDK5RAP3-206ENST00000578018 TIMM17AQ99595 171 aa10.23□□□□□ -0.77
CDK5RAP3-206ENST00000578018 MRPL35Q9NZE8 188 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-206ENST00000578018 PSORS1C2Q9UIG4 136 aa10.23□□□□□ -0.77
CDK5RAP3-206ENST00000578018 IFITM10A6NMD0 228 aa10.22□□□□□ -0.77
CDK5RAP3-206ENST00000578018 ATP6V1G1O75348 118 aa10.22□□□□□ -0.77
CDK5RAP3-206ENST00000578018 ERASQ7Z444 233 aa10.22□□□□□ -0.77
CDK5RAP3-206ENST00000578018 AMELXQ99217 191 aa10.22□□□□□ -0.77
CDK5RAP3-206ENST00000578018 F8WDY8 70 aa10.21□□□□□ -0.77
CDK5RAP3-206ENST00000578018 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.77
CDK5RAP3-206ENST00000578018 PHF5AQ7RTV0 110 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-206ENST00000578018 NDUFA1O15239 70 aa10.2□□□□□ -0.78
CDK5RAP3-206ENST00000578018 C10orf25Q5T742 122 aa10.2□□□□□ -0.78
CDK5RAP3-206ENST00000578018 CHCHD1Q96BP2 118 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-206ENST00000578018 RNF213Q63HN8 5207 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms