RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 D6R8Y8 96 aa1.16□□□□□ -2.22
TOP2A-203ENST00000577706 G3V318 75 aa1.16□□□□□ -2.22
TOP2A-203ENST00000577706 NCR3O14931 201 aa1.16□□□□□ -2.22
TOP2A-203ENST00000577706 UQCR11O14957 56 aa1.16□□□□□ -2.22
TOP2A-203ENST00000577706 S100A3P33764 101 aa1.16□□□□□ -2.22
TOP2A-203ENST00000577706 MUSTN1Q8IVN3 82 aa1.16□□□□□ -2.22
TOP2A-203ENST00000577706 HILPDAQ9Y5L2 63 aa1.16□□□□□ -2.22
TOP2A-203ENST00000577706 PPRC1Q5VV67 1664 aaKnown RBP1.16□□□□□ -2.22
TOP2A-203ENST00000577706 ANKARQ7Z5J8 1434 aa1.15□□□□□ -2.22
TOP2A-203ENST00000577706 SMIM11AP58511 58 aa1.15□□□□□ -2.23
TOP2A-203ENST00000577706 PLGLAQ15195 96 aa1.15□□□□□ -2.23
TOP2A-203ENST00000577706 LINC01600Q96MT4 127 aa1.15□□□□□ -2.23
TOP2A-203ENST00000577706 ZC3H13Q5T200 1668 aaKnown RBP1.15□□□□□ -2.23
TOP2A-203ENST00000577706 PPLO60437 1756 aa1.15□□□□□ -2.23
TOP2A-203ENST00000577706 SUPT6HQ7KZ85 1726 aaKnown RBP1.15□□□□□ -2.23
TOP2A-203ENST00000577706 MYO5CQ9NQX4 1742 aa1.15□□□□□ -2.23
TOP2A-203ENST00000577706 IFT172Q9UG01 1749 aa1.15□□□□□ -2.23
TOP2A-203ENST00000577706 SSC5DA1L4H1 1573 aa1.14□□□□□ -2.23
TOP2A-203ENST00000577706 IQSEC2Q5JU85 1478 aa1.14□□□□□ -2.23
TOP2A-203ENST00000577706 GVQW2A0A096LPI5 108 aaPredicted RBP1.14□□□□□ -2.23
TOP2A-203ENST00000577706 CEBPZOSA8MTT3 80 aa1.14□□□□□ -2.23
TOP2A-203ENST00000577706 UMAD1C9J7I0 102 aa1.14□□□□□ -2.23
TOP2A-203ENST00000577706 BCE1O60756 84 aa1.14□□□□□ -2.23
TOP2A-203ENST00000577706 SMIM13P0DJ93 91 aa1.14□□□□□ -2.23
TOP2A-203ENST00000577706 SPRR4Q96PI1 79 aa1.14□□□□□ -2.23
TOP2A-203ENST00000577706 DLG5Q8TDM6 1919 aa1.14□□□□□ -2.23
TOP2A-203ENST00000577706 FN1P02751 2386 aaKnown RBP1.14□□□□□ -2.23
TOP2A-203ENST00000577706 NHSL1Q5SYE7 1610 aa1.14□□□□□ -2.23
TOP2A-203ENST00000577706 CASP8AP2Q9UKL3 1982 aa1.14□□□□□ -2.23
TOP2A-203ENST00000577706 LOC285556D6RIA3 1793 aa1.13□□□□□ -2.23
TOP2A-203ENST00000577706 MED12LQ86YW9 2145 aa1.13□□□□□ -2.23
TOP2A-203ENST00000577706 CFAP74Q9C0B2 1584 aa1.13□□□□□ -2.23
TOP2A-203ENST00000577706 ACYP1P07311 99 aa1.13□□□□□ -2.23
TOP2A-203ENST00000577706 PLAC4Q8WY50 150 aa1.13□□□□□ -2.23
TOP2A-203ENST00000577706 PLAC8Q9NZF1 115 aa1.13□□□□□ -2.23
TOP2A-203ENST00000577706 CUX1P39880 1505 aa1.13□□□□□ -2.23
TOP2A-203ENST00000577706 SIPA1L3O60292 1781 aaPredicted RBP1.13□□□□□ -2.23
TOP2A-203ENST00000577706 NCOA2Q15596 1464 aa1.12□□□□□ -2.23
TOP2A-203ENST00000577706 KNDC1Q76NI1 1749 aa1.12□□□□□ -2.23
TOP2A-203ENST00000577706 CACNA1GO43497 2377 aa1.12□□□□□ -2.23
TOP2A-203ENST00000577706 MGPP08493 103 aa1.12□□□□□ -2.23
TOP2A-203ENST00000577706 C10orf113Q5VZT2 155 aa1.12□□□□□ -2.23
TOP2A-203ENST00000577706 Q6ZRX8 168 aa1.12□□□□□ -2.23
TOP2A-203ENST00000577706 UBE2D4Q9Y2X8 147 aa1.12□□□□□ -2.23
TOP2A-203ENST00000577706 ZNF831Q5JPB2 1677 aa1.12□□□□□ -2.23
TOP2A-203ENST00000577706 AFDNP55196 1824 aaKnown RBP1.12□□□□□ -2.23
TOP2A-203ENST00000577706 PEAK1Q9H792 1746 aa1.12□□□□□ -2.23
TOP2A-203ENST00000577706 MROH1Q8NDA8 1641 aa1.11□□□□□ -2.23
TOP2A-203ENST00000577706 HAMPP81172 84 aa1.11□□□□□ -2.23
TOP2A-203ENST00000577706 Q6JHZ5 121 aa1.11□□□□□ -2.23
TOP2A-203ENST00000577706 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.11□□□□□ -2.23
TOP2A-203ENST00000577706 CEP170BQ9Y4F5 1589 aaPredicted RBP1.11□□□□□ -2.23
TOP2A-203ENST00000577706 PLXNA1Q9UIW2 1896 aa1.11□□□□□ -2.23
TOP2A-203ENST00000577706 FREM1Q5H8C1 2179 aa1.11□□□□□ -2.23
TOP2A-203ENST00000577706 C1orf167Q5SNV9 1468 aa1.11□□□□□ -2.23
TOP2A-203ENST00000577706 ESPL1Q14674 2120 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 EXPH5Q8NEV8 1989 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 PCDH15Q96QU1 1955 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 COL4A1P02462 1669 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 DUOX2Q9NRD8 1548 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 ARFGEF3Q5TH69 2177 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 H0Y9P7 68 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 H3BVH4 76 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 LYNX1P0DP58 116 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 GCHFRP30047 84 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 GNGT1P63211 74 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 DEFB121Q5J5C9 76 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 LTN1O94822 1766 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 ABCA4P78363 2273 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 ZGRF1Q86YA3 2104 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 BTAF1O14981 1849 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 ABCC1P33527 1531 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 KCPQ6ZWJ8 1503 aa1.1□□□□□ -2.23
TOP2A-203ENST00000577706 HFM1A2PYH4 1435 aa1.09□□□□□ -2.23
TOP2A-203ENST00000577706 ALPK2Q86TB3 2170 aa1.09□□□□□ -2.23
TOP2A-203ENST00000577706 A0A087WXM4 84 aa1.09□□□□□ -2.23
TOP2A-203ENST00000577706 TRBV7-4A0A0J9YYF1 115 aa1.09□□□□□ -2.23
TOP2A-203ENST00000577706 COX17Q14061 63 aa1.09□□□□□ -2.23
TOP2A-203ENST00000577706 SMIM11BQ8TCY0 68 aa1.09□□□□□ -2.23
TOP2A-203ENST00000577706 INO80Q9ULG1 1556 aaPredicted RBP1.08□□□□□ -2.24
TOP2A-203ENST00000577706 MDC1Q14676 2089 aaKnown RBP1.08□□□□□ -2.24
TOP2A-203ENST00000577706 RPL37P61927 97 aaKnown RBP1.08□□□□□ -2.24
TOP2A-203ENST00000577706 HMGN3Q15651 99 aa1.08□□□□□ -2.24
TOP2A-203ENST00000577706 SPATA8Q6RVD6 105 aa1.08□□□□□ -2.24
TOP2A-203ENST00000577706 C10orf99Q6UWK7 81 aa1.08□□□□□ -2.24
TOP2A-203ENST00000577706 SSBP3-AS1Q7Z2R9 100 aa1.08□□□□□ -2.24
TOP2A-203ENST00000577706 SMIM4Q8WVI0 70 aa1.08□□□□□ -2.24
TOP2A-203ENST00000577706 ASXL1Q8IXJ9 1541 aa1.08□□□□□ -2.24
TOP2A-203ENST00000577706 ABCC2Q92887 1545 aa1.08□□□□□ -2.24
TOP2A-203ENST00000577706 ICE1Q9Y2F5 2266 aa1.08□□□□□ -2.24
TOP2A-203ENST00000577706 HELZ2Q9BYK8 2649 aaKnown RBP1.07□□□□□ -2.24
TOP2A-203ENST00000577706 IFI6P09912 130 aa1.07□□□□□ -2.24
TOP2A-203ENST00000577706 LINC00575Q6W349 94 aa1.07□□□□□ -2.24
TOP2A-203ENST00000577706 TMEM263Q8WUH6 116 aaKnown RBP1.07□□□□□ -2.24
TOP2A-203ENST00000577706 S100ZQ8WXG8 99 aa1.07□□□□□ -2.24
TOP2A-203ENST00000577706 LAMA4Q16363 1823 aa1.07□□□□□ -2.24
TOP2A-203ENST00000577706 SETBP1Q9Y6X0 1596 aa1.07□□□□□ -2.24
TOP2A-203ENST00000577706 LRP6O75581 1613 aa1.07□□□□□ -2.24
TOP2A-203ENST00000577706 USP32Q8NFA0 1604 aa1.07□□□□□ -2.24
TOP2A-203ENST00000577706 NUP188Q5SRE5 1749 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms