RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 FABP9Q0Z7S8 132 aa15.04■□□□□ -0
SNF8-217ENST00000576353 DPH3Q96FX2 82 aa15.04■□□□□ -0
SNF8-217ENST00000576353 DNAH8Q96JB1 4490 aa15.04■□□□□ -0
SNF8-217ENST00000576353 CIRBPQ14011 172 aaKnown RBP15.03■□□□□ -0
SNF8-217ENST00000576353 Q6ZN92 141 aa15.03■□□□□ -0
SNF8-217ENST00000576353 TEX43Q6ZNM6 134 aa15.03■□□□□ -0
SNF8-217ENST00000576353 LINC00526Q96FQ7 95 aa15.03■□□□□ -0
SNF8-217ENST00000576353 PKIGQ9Y2B9 76 aa15.03■□□□□ -0
SNF8-217ENST00000576353 IGHV3OR16-9A0A0B4J2B5 98 aa15.02■□□□□ -0
SNF8-217ENST00000576353 PANO1I0J062 215 aa15.02■□□□□ -0
SNF8-217ENST00000576353 COX6A2Q02221 97 aa15.02■□□□□ -0
SNF8-217ENST00000576353 CARD19Q96LW7 228 aa15.02■□□□□ -0
SNF8-217ENST00000576353 TGIF2-C20orf24A0A0A6YYL0 155 aa15.01□□□□□ -0.01
SNF8-217ENST00000576353 SYCNQ0VAF6 134 aa15.01□□□□□ -0.01
SNF8-217ENST00000576353 C2orf88Q9BSF0 95 aa15.01□□□□□ -0.01
SNF8-217ENST00000576353 VCX2Q9H322 139 aa15.01□□□□□ -0.01
SNF8-217ENST00000576353 IGLV4-69A0A075B6H9 119 aa15□□□□□ -0.01
SNF8-217ENST00000576353 IGIPA6NJ69 53 aa15□□□□□ -0.01
SNF8-217ENST00000576353 FAT1Q14517 4588 aa14.99□□□□□ -0.01
SNF8-217ENST00000576353 PAPPA-AS1Q5QFB9 102 aa14.99□□□□□ -0.01
SNF8-217ENST00000576353 OR10D4PQ8NGN7 298 aa14.99□□□□□ -0.01
SNF8-217ENST00000576353 SPACA4Q8TDM5 124 aa14.99□□□□□ -0.01
SNF8-217ENST00000576353 CHTF8P0CG12 524 aa14.98□□□□□ -0.01
SNF8-217ENST00000576353 LINC00242Q5T6M2 205 aa14.98□□□□□ -0.01
SNF8-217ENST00000576353 TOMM6Q96B49 74 aa14.98□□□□□ -0.01
SNF8-217ENST00000576353 C2orf48Q96LS8 159 aa14.98□□□□□ -0.01
SNF8-217ENST00000576353 TRAPPC1Q9Y5R8 145 aa14.98□□□□□ -0.01
SNF8-217ENST00000576353 LINC01546A6NGU7 62 aa14.97□□□□□ -0.01
SNF8-217ENST00000576353 LINC01549A6NIU2 74 aa14.97□□□□□ -0.01
SNF8-217ENST00000576353 CAMK2N2Q96S95 79 aa14.97□□□□□ -0.01
SNF8-217ENST00000576353 AMELXQ99217 191 aa14.97□□□□□ -0.01
SNF8-217ENST00000576353 UBE2D1P51668 147 aa14.96□□□□□ -0.01
SNF8-217ENST00000576353 SPAG11BQ08648 103 aa14.96□□□□□ -0.01
SNF8-217ENST00000576353 TIMM17AQ99595 171 aa14.96□□□□□ -0.01
SNF8-217ENST00000576353 SRRM2Q9UQ35 2752 aaKnown RBP14.96□□□□□ -0.02
SNF8-217ENST00000576353 A0A087WYN8 130 aa14.95□□□□□ -0.02
SNF8-217ENST00000576353 FA2HQ7L5A8 372 aa14.95□□□□□ -0.02
SNF8-217ENST00000576353 ORAOV1Q8WV07 137 aa14.95□□□□□ -0.02
SNF8-217ENST00000576353 LINC00474Q9P2X8 69 aa14.95□□□□□ -0.02
SNF8-217ENST00000576353 A0A087WZ39 114 aa14.94□□□□□ -0.02
SNF8-217ENST00000576353 IGKV2-24A0A0C4DH68 120 aa14.94□□□□□ -0.02
SNF8-217ENST00000576353 Q6ZRU5 148 aa14.94□□□□□ -0.02
SNF8-217ENST00000576353 LINC00173Q6ZV60 143 aa14.94□□□□□ -0.02
SNF8-217ENST00000576353 ERASQ7Z444 233 aa14.94□□□□□ -0.02
SNF8-217ENST00000576353 SCGB3A1Q96QR1 104 aa14.94□□□□□ -0.02
SNF8-217ENST00000576353 SMCO4Q9NRQ5 59 aa14.94□□□□□ -0.02
SNF8-217ENST00000576353 F8WDY8 70 aa14.93□□□□□ -0.02
SNF8-217ENST00000576353 MAJINQ3KP22 176 aa14.93□□□□□ -0.02
SNF8-217ENST00000576353 ZC2HC1BQ5TFG8 222 aa14.93□□□□□ -0.02
SNF8-217ENST00000576353 PLAC8Q9NZF1 115 aa14.92□□□□□ -0.02
SNF8-217ENST00000576353 A0A096LNI7 61 aa14.91□□□□□ -0.02
SNF8-217ENST00000576353 SEC11AP67812 179 aa14.9□□□□□ -0.02
SNF8-217ENST00000576353 FAM19A3Q7Z5A8 133 aa14.9□□□□□ -0.02
SNF8-217ENST00000576353 LINC01561Q8N1V8 128 aa14.9□□□□□ -0.02
SNF8-217ENST00000576353 VPS13BQ7Z7G8 4022 aa14.89□□□□□ -0.03
SNF8-217ENST00000576353 LOC107984640A0A0U1RRK4 108 aa14.89□□□□□ -0.03
SNF8-217ENST00000576353 RPL37AP61513 92 aaKnown RBP14.89□□□□□ -0.03
SNF8-217ENST00000576353 RNF151Q2KHN1 245 aa14.88□□□□□ -0.03
SNF8-217ENST00000576353 STPG4Q8N801 248 aa14.88□□□□□ -0.03
SNF8-217ENST00000576353 NDUFA1O15239 70 aa14.87□□□□□ -0.03
SNF8-217ENST00000576353 KRTAP10-4P60372 401 aaPredicted RBP14.87□□□□□ -0.03
SNF8-217ENST00000576353 C18orf32Q8TCD1 76 aa14.87□□□□□ -0.03
SNF8-217ENST00000576353 YPEL4Q96NS1 127 aa14.87□□□□□ -0.03
SNF8-217ENST00000576353 MRPL35Q9NZE8 188 aaKnown RBP14.87□□□□□ -0.03
SNF8-217ENST00000576353 LINC00614P0C842 121 aa14.86□□□□□ -0.03
SNF8-217ENST00000576353 HERVK_113P63121 156 aa14.86□□□□□ -0.03
SNF8-217ENST00000576353 SLC7A5P1Q8MH63 180 aa14.86□□□□□ -0.03
SNF8-217ENST00000576353 PTTG1IPP53801 180 aa14.85□□□□□ -0.03
SNF8-217ENST00000576353 GEMIN7Q9H840 131 aaKnown RBP14.85□□□□□ -0.03
SNF8-217ENST00000576353 GAGE2BQ13066 116 aa14.84□□□□□ -0.03
SNF8-217ENST00000576353 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.83□□□□□ -0.04
SNF8-217ENST00000576353 RAB5BP61020 215 aa14.83□□□□□ -0.04
SNF8-217ENST00000576353 KIAA0087Q14695 138 aa14.83□□□□□ -0.04
SNF8-217ENST00000576353 C7orf33Q8WU49 177 aa14.83□□□□□ -0.04
SNF8-217ENST00000576353 UNQ6190/PRO20217Q6UXQ8 127 aa14.82□□□□□ -0.04
SNF8-217ENST00000576353 FLG2Q5D862 2391 aaPredicted RBP14.81□□□□□ -0.04
SNF8-217ENST00000576353 A0A0J9YXV3 536 aa14.81□□□□□ -0.04
SNF8-217ENST00000576353 RPL18AQ02543 176 aaKnown RBP14.81□□□□□ -0.04
SNF8-217ENST00000576353 CBLN2Q8IUK8 224 aa14.81□□□□□ -0.04
SNF8-217ENST00000576353 URB1-AS1Q96HZ7 61 aa14.81□□□□□ -0.04
SNF8-217ENST00000576353 CST9LQ9H4G1 147 aa14.81□□□□□ -0.04
SNF8-217ENST00000576353 PRSS2P07478 247 aa14.8□□□□□ -0.04
SNF8-217ENST00000576353 PMVKQ15126 192 aa14.8□□□□□ -0.04
SNF8-217ENST00000576353 C10orf25Q5T742 122 aa14.8□□□□□ -0.04
SNF8-217ENST00000576353 PACRGQ96M98 296 aaPredicted RBP14.8□□□□□ -0.04
SNF8-217ENST00000576353 CDKN2A-AS1Q9UH64 79 aa14.8□□□□□ -0.04
SNF8-217ENST00000576353 TINCRA0A1B0GVN0 87 aa14.79□□□□□ -0.04
SNF8-217ENST00000576353 HBDP02042 147 aa14.78□□□□□ -0.04
SNF8-217ENST00000576353 C6orf48Q9UBA6 75 aa14.78□□□□□ -0.04
SNF8-217ENST00000576353 A0A096LNJ9 63 aa14.77□□□□□ -0.05
SNF8-217ENST00000576353 TRBV30A0A0K0K1B3 111 aa14.77□□□□□ -0.05
SNF8-217ENST00000576353 C6orf226Q5I0X4 101 aa14.77□□□□□ -0.05
SNF8-217ENST00000576353 LINC00469Q8N7U9 141 aa14.77□□□□□ -0.05
SNF8-217ENST00000576353 TOMM7Q9P0U1 55 aa14.77□□□□□ -0.05
SNF8-217ENST00000576353 TLX1NBP0CAT3 122 aa14.76□□□□□ -0.05
SNF8-217ENST00000576353 CKS1BP61024 79 aa14.76□□□□□ -0.05
SNF8-217ENST00000576353 C2orf82Q6UX34 121 aa14.76□□□□□ -0.05
SNF8-217ENST00000576353 Q8IZM0 81 aa14.76□□□□□ -0.05
SNF8-217ENST00000576353 IGLV5-45A0A087WSX0 123 aa14.74□□□□□ -0.05
SNF8-217ENST00000576353 PMCHL1Q16048 86 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms