RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 NUPR1O60356 82 aa5.32□□□□□ -1.56
SMG6-218ENST00000575454 CRYGAP11844 174 aa5.32□□□□□ -1.56
SMG6-218ENST00000575454 RAB4AP20338 218 aa5.32□□□□□ -1.56
SMG6-218ENST00000575454 SUMO2P61956 95 aaKnown RBP5.32□□□□□ -1.56
SMG6-218ENST00000575454 LBHQ53QV2 105 aaPredicted RBP5.32□□□□□ -1.56
SMG6-218ENST00000575454 C10orf25Q5T742 122 aa5.32□□□□□ -1.56
SMG6-218ENST00000575454 UNQ6190/PRO20217Q6UXQ8 127 aa5.32□□□□□ -1.56
SMG6-218ENST00000575454 Q6ZUT4 128 aa5.32□□□□□ -1.56
SMG6-218ENST00000575454 C6orf48Q9UBA6 75 aa5.32□□□□□ -1.56
SMG6-218ENST00000575454 TYMSOSQ8TAI1 123 aa5.31□□□□□ -1.56
SMG6-218ENST00000575454 PACRGQ96M98 296 aaPredicted RBP5.31□□□□□ -1.56
SMG6-218ENST00000575454 CDIP1Q9H305 208 aa5.31□□□□□ -1.56
SMG6-218ENST00000575454 SPANXA1Q9NS26 97 aa5.31□□□□□ -1.56
SMG6-218ENST00000575454 CRCT1Q9UGL9 99 aa5.31□□□□□ -1.56
SMG6-218ENST00000575454 TGIF2-C20orf24A0A0A6YYL0 155 aa5.3□□□□□ -1.56
SMG6-218ENST00000575454 HIGD1CA8MV81 97 aa5.3□□□□□ -1.56
SMG6-218ENST00000575454 RPL28P46779 137 aaKnown RBP5.3□□□□□ -1.56
SMG6-218ENST00000575454 HBBP68871 147 aa5.3□□□□□ -1.56
SMG6-218ENST00000575454 KRTAP7-1Q8IUC3 87 aa5.3□□□□□ -1.56
SMG6-218ENST00000575454 AMN1Q8IY45 258 aa5.3□□□□□ -1.56
SMG6-218ENST00000575454 IFITM10A6NMD0 228 aa5.29□□□□□ -1.56
SMG6-218ENST00000575454 TMEM250H0YL14 139 aa5.29□□□□□ -1.56
SMG6-218ENST00000575454 CTAG1AP78358 180 aa5.29□□□□□ -1.56
SMG6-218ENST00000575454 MRPS36P82909 103 aaKnown RBP5.29□□□□□ -1.56
SMG6-218ENST00000575454 RIGQ13278 110 aa5.29□□□□□ -1.56
SMG6-218ENST00000575454 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
SMG6-218ENST00000575454 C20orf78Q9BR46 151 aa5.29□□□□□ -1.56
SMG6-218ENST00000575454 RPL32P62910 135 aaKnown RBP5.28□□□□□ -1.56
SMG6-218ENST00000575454 RGS21Q2M5E4 152 aa5.28□□□□□ -1.56
SMG6-218ENST00000575454 C9orf129Q5T035 196 aaKnown RBP5.28□□□□□ -1.56
SMG6-218ENST00000575454 NRACQ8N912 160 aa5.28□□□□□ -1.56
SMG6-218ENST00000575454 CTDSP1Q9GZU7 261 aa5.28□□□□□ -1.56
SMG6-218ENST00000575454 A0A087X002 238 aa5.27□□□□□ -1.57
SMG6-218ENST00000575454 LINC00862A6NCI5 91 aa5.27□□□□□ -1.57
SMG6-218ENST00000575454 SMKR1H3BMG3 65 aa5.27□□□□□ -1.57
SMG6-218ENST00000575454 BCE1O60756 84 aa5.27□□□□□ -1.57
SMG6-218ENST00000575454 KIAA0087Q14695 138 aa5.27□□□□□ -1.57
SMG6-218ENST00000575454 LINC01561Q8N1V8 128 aa5.27□□□□□ -1.57
SMG6-218ENST00000575454 C22orf24Q9Y442 160 aa5.27□□□□□ -1.57
SMG6-218ENST00000575454 IGLV7-46A0A075B6I9 117 aa5.26□□□□□ -1.57
SMG6-218ENST00000575454 TRBV24-1A0A075B6N3 115 aa5.26□□□□□ -1.57
SMG6-218ENST00000575454 ZNF727A8MUV8 499 aa5.26□□□□□ -1.57
SMG6-218ENST00000575454 BATF3Q9NR55 127 aa5.26□□□□□ -1.57
SMG6-218ENST00000575454 PRSS2P07478 247 aa5.25□□□□□ -1.57
SMG6-218ENST00000575454 CKS2P33552 79 aa5.25□□□□□ -1.57
SMG6-218ENST00000575454 CKS1BP61024 79 aa5.25□□□□□ -1.57
SMG6-218ENST00000575454 RPL39P62891 51 aaKnown RBP5.25□□□□□ -1.57
SMG6-218ENST00000575454 FAM229BQ4G0N7 80 aa5.25□□□□□ -1.57
SMG6-218ENST00000575454 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
SMG6-218ENST00000575454 FAM104BQ5XKR9 115 aa5.25□□□□□ -1.57
SMG6-218ENST00000575454 C2orf82Q6UX34 121 aa5.25□□□□□ -1.57
SMG6-218ENST00000575454 LINC00173Q6ZV60 143 aa5.25□□□□□ -1.57
SMG6-218ENST00000575454 LINC00304Q8N9R0 145 aa5.25□□□□□ -1.57
SMG6-218ENST00000575454 OSTCQ9NRP0 149 aa5.25□□□□□ -1.57
SMG6-218ENST00000575454 TP73-AS1Q9UF72 201 aa5.25□□□□□ -1.57
SMG6-218ENST00000575454 A0A1B0GW15 77 aa5.24□□□□□ -1.57
SMG6-218ENST00000575454 IFI27P40305 119 aaPredicted RBP5.24□□□□□ -1.57
SMG6-218ENST00000575454 CEBPGP53567 150 aa5.24□□□□□ -1.57
SMG6-218ENST00000575454 LINC01547P58512 204 aaPredicted RBP5.24□□□□□ -1.57
SMG6-218ENST00000575454 MRPL51Q4U2R6 128 aaKnown RBP5.24□□□□□ -1.57
SMG6-218ENST00000575454 LINC00242Q5T6M2 205 aa5.24□□□□□ -1.57
SMG6-218ENST00000575454 MRPL55Q7Z7F7 128 aaKnown RBP5.24□□□□□ -1.57
SMG6-218ENST00000575454 LINC01551Q86U37 167 aa5.24□□□□□ -1.57
SMG6-218ENST00000575454 SLC51BQ86UW2 128 aa5.24□□□□□ -1.57
SMG6-218ENST00000575454 FAM104AQ969W3 186 aa5.24□□□□□ -1.57
SMG6-218ENST00000575454 RETNLBQ9BQ08 111 aa5.24□□□□□ -1.57
SMG6-218ENST00000575454 NAT8BQ9UHF3 227 aa5.24□□□□□ -1.57
SMG6-218ENST00000575454 C6orf226Q5I0X4 101 aa5.23□□□□□ -1.57
SMG6-218ENST00000575454 SMIM7Q9BQ49 75 aa5.23□□□□□ -1.57
SMG6-218ENST00000575454 SMIM2Q9BVW6 85 aa5.23□□□□□ -1.57
SMG6-218ENST00000575454 PYGO1Q9Y3Y4 419 aa5.23□□□□□ -1.57
SMG6-218ENST00000575454 IGKV2D-26A0A0A0MRZ7 120 aa5.22□□□□□ -1.57
SMG6-218ENST00000575454 TNFRSF6BO95407 300 aa5.22□□□□□ -1.57
SMG6-218ENST00000575454 RAB5AP20339 215 aa5.22□□□□□ -1.57
SMG6-218ENST00000575454 BLOC1S1P78537 153 aa5.22□□□□□ -1.57
SMG6-218ENST00000575454 Q6ZN92 141 aa5.22□□□□□ -1.57
SMG6-218ENST00000575454 LINC00469Q8N7U9 141 aa5.22□□□□□ -1.57
SMG6-218ENST00000575454 C2orf88Q9BSF0 95 aa5.22□□□□□ -1.57
SMG6-218ENST00000575454 XAGE1AQ9HD64 81 aa5.22□□□□□ -1.57
SMG6-218ENST00000575454 F8W036 122 aa5.21□□□□□ -1.58
SMG6-218ENST00000575454 PPBPP02775 128 aa5.21□□□□□ -1.58
SMG6-218ENST00000575454 S100A8P05109 93 aa5.21□□□□□ -1.58
SMG6-218ENST00000575454 UBE2AP49459 152 aa5.21□□□□□ -1.58
SMG6-218ENST00000575454 KRTAP13-2Q52LG2 175 aa5.21□□□□□ -1.58
SMG6-218ENST00000575454 TEX43Q6ZNM6 134 aa5.21□□□□□ -1.58
SMG6-218ENST00000575454 Q8IZM0 81 aa5.21□□□□□ -1.58
SMG6-218ENST00000575454 TMEM141Q96I45 108 aa5.21□□□□□ -1.58
SMG6-218ENST00000575454 PPDPFQ9H3Y8 114 aa5.21□□□□□ -1.58
SMG6-218ENST00000575454 ANAPC11Q9NYG5 84 aa5.21□□□□□ -1.58
SMG6-218ENST00000575454 V9GYV3 84 aa5.21□□□□□ -1.58
SMG6-218ENST00000575454 FAM74A3Q4VXF1 159 aa5.2□□□□□ -1.58
SMG6-218ENST00000575454 LINC00337Q8N6G1 96 aa5.2□□□□□ -1.58
SMG6-218ENST00000575454 ALKBH7Q9BT30 221 aaPredicted RBP5.2□□□□□ -1.58
SMG6-218ENST00000575454 TOMM7Q9P0U1 55 aa5.2□□□□□ -1.58
SMG6-218ENST00000575454 IGLV4-3A0A075B6K6 122 aa5.19□□□□□ -1.58
SMG6-218ENST00000575454 D6R8Y8 96 aa5.19□□□□□ -1.58
SMG6-218ENST00000575454 F8VRH5 84 aa5.19□□□□□ -1.58
SMG6-218ENST00000575454 LINC00167Q96N53 147 aa5.19□□□□□ -1.58
SMG6-218ENST00000575454 EIF5A2Q9GZV4 153 aaKnown RBP5.19□□□□□ -1.58
SMG6-218ENST00000575454 VCX2Q9H322 139 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms