RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 SLPIP03973 132 aa13.1□□□□□ -0.31
SPNS3-203ENST00000575185 FA2HQ7L5A8 372 aa13.1□□□□□ -0.31
SPNS3-203ENST00000575185 ZNF664Q8N3J9 261 aa13.1□□□□□ -0.31
SPNS3-203ENST00000575185 SPACA4Q8TDM5 124 aa13.1□□□□□ -0.31
SPNS3-203ENST00000575185 DPH3Q96FX2 82 aa13.1□□□□□ -0.31
SPNS3-203ENST00000575185 CYSLTR1Q9Y271 337 aa13.1□□□□□ -0.31
SPNS3-203ENST00000575185 CDC42SE2Q9NRR3 84 aa13.09□□□□□ -0.31
SPNS3-203ENST00000575185 IGHV3-64A0A075B6Q5 118 aa13.08□□□□□ -0.32
SPNS3-203ENST00000575185 RAB5BP61020 215 aa13.08□□□□□ -0.32
SPNS3-203ENST00000575185 PYGO1Q9Y3Y4 419 aa13.08□□□□□ -0.32
SPNS3-203ENST00000575185 LINC01546A6NGU7 62 aa13.07□□□□□ -0.32
SPNS3-203ENST00000575185 COLCA2A8K830 154 aa13.07□□□□□ -0.32
SPNS3-203ENST00000575185 CCL25O15444 150 aa13.07□□□□□ -0.32
SPNS3-203ENST00000575185 RPL39P62891 51 aaKnown RBP13.07□□□□□ -0.32
SPNS3-203ENST00000575185 C2orf66Q6UXQ4 117 aa13.07□□□□□ -0.32
SPNS3-203ENST00000575185 C18orf32Q8TCD1 76 aa13.07□□□□□ -0.32
SPNS3-203ENST00000575185 LINC01600Q96MT4 127 aa13.07□□□□□ -0.32
SPNS3-203ENST00000575185 LPAP08519 4548 aa13.07□□□□□ -0.32
SPNS3-203ENST00000575185 NPSP0C0P6 89 aa13.06□□□□□ -0.32
SPNS3-203ENST00000575185 MRPS36P82909 103 aaKnown RBP13.06□□□□□ -0.32
SPNS3-203ENST00000575185 IGKV3OR2-268A0A0C4DH90 116 aa13.05□□□□□ -0.32
SPNS3-203ENST00000575185 SS18Q15532 418 aa13.05□□□□□ -0.32
SPNS3-203ENST00000575185 PLAC8Q9NZF1 115 aa13.05□□□□□ -0.32
SPNS3-203ENST00000575185 ATP6V1G1O75348 118 aa13.04□□□□□ -0.32
SPNS3-203ENST00000575185 AP5S1Q9NUS5 200 aa13.04□□□□□ -0.32
SPNS3-203ENST00000575185 SCO1O75880 301 aa13.03□□□□□ -0.32
SPNS3-203ENST00000575185 TRGC2P03986 189 aa13.03□□□□□ -0.32
SPNS3-203ENST00000575185 LINC00614P0C842 121 aa13.03□□□□□ -0.32
SPNS3-203ENST00000575185 PAPPA-AS1Q5QFB9 102 aa13.03□□□□□ -0.32
SPNS3-203ENST00000575185 LINC00959A0A1B0GUT2 108 aa13.02□□□□□ -0.33
SPNS3-203ENST00000575185 PRR3P79522 188 aaKnown RBP13.02□□□□□ -0.33
SPNS3-203ENST00000575185 Q6ZN92 141 aa13.02□□□□□ -0.33
SPNS3-203ENST00000575185 Q6ZUT4 128 aa13.02□□□□□ -0.33
SPNS3-203ENST00000575185 C7orf33Q8WU49 177 aa13.02□□□□□ -0.33
SPNS3-203ENST00000575185 TOMM6Q96B49 74 aa13.02□□□□□ -0.33
SPNS3-203ENST00000575185 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.01□□□□□ -0.33
SPNS3-203ENST00000575185 CHCHD10Q8WYQ3 142 aaPredicted RBP13.01□□□□□ -0.33
SPNS3-203ENST00000575185 TMEM141Q96I45 108 aa13.01□□□□□ -0.33
SPNS3-203ENST00000575185 C1orf196B1AJZ1 125 aa13□□□□□ -0.33
SPNS3-203ENST00000575185 TIMM17AQ99595 171 aa13□□□□□ -0.33
SPNS3-203ENST00000575185 A0A0J9YXV3 536 aa12.99□□□□□ -0.33
SPNS3-203ENST00000575185 CHCHD1Q96BP2 118 aaKnown RBP12.99□□□□□ -0.33
SPNS3-203ENST00000575185 C2orf88Q9BSF0 95 aa12.99□□□□□ -0.33
SPNS3-203ENST00000575185 IGLV4-3A0A075B6K6 122 aa12.98□□□□□ -0.33
SPNS3-203ENST00000575185 GAGE12HA6NDE8 117 aa12.98□□□□□ -0.33
SPNS3-203ENST00000575185 COX6A2Q02221 97 aa12.98□□□□□ -0.33
SPNS3-203ENST00000575185 CFAP161Q6P656 301 aa12.98□□□□□ -0.33
SPNS3-203ENST00000575185 TEX43Q6ZNM6 134 aa12.98□□□□□ -0.33
SPNS3-203ENST00000575185 ERASQ7Z444 233 aa12.98□□□□□ -0.33
SPNS3-203ENST00000575185 TRAV13-1A0A0B4J241 112 aa12.97□□□□□ -0.33
SPNS3-203ENST00000575185 IGKV2-24A0A0C4DH68 120 aa12.97□□□□□ -0.33
SPNS3-203ENST00000575185 IGIPA6NJ69 53 aa12.97□□□□□ -0.33
SPNS3-203ENST00000575185 KRTAP10-8P60410 259 aa12.97□□□□□ -0.33
SPNS3-203ENST00000575185 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
SPNS3-203ENST00000575185 CD164L2Q6UWJ8 174 aa12.97□□□□□ -0.33
SPNS3-203ENST00000575185 BAGE3Q86Y29 109 aa12.97□□□□□ -0.33
SPNS3-203ENST00000575185 C15orf56Q8N910 161 aa12.97□□□□□ -0.33
SPNS3-203ENST00000575185 SCGB3A1Q96QR1 104 aa12.97□□□□□ -0.33
SPNS3-203ENST00000575185 VCX2Q9H322 139 aa12.97□□□□□ -0.33
SPNS3-203ENST00000575185 IFITM10A6NMD0 228 aa12.96□□□□□ -0.33
SPNS3-203ENST00000575185 HBDP02042 147 aa12.96□□□□□ -0.33
SPNS3-203ENST00000575185 MAJINQ3KP22 176 aa12.96□□□□□ -0.33
SPNS3-203ENST00000575185 OPRPNQ99935 248 aaPredicted RBP12.96□□□□□ -0.33
SPNS3-203ENST00000575185 XCL1P47992 114 aa12.95□□□□□ -0.34
SPNS3-203ENST00000575185 FAM104AQ969W3 186 aa12.95□□□□□ -0.34
SPNS3-203ENST00000575185 URB1-AS1Q96HZ7 61 aa12.95□□□□□ -0.34
SPNS3-203ENST00000575185 FOXI1Q12951 378 aa12.93□□□□□ -0.34
SPNS3-203ENST00000575185 HIGD2BQ4VC39 106 aa12.93□□□□□ -0.34
SPNS3-203ENST00000575185 STPG4Q8N801 248 aa12.93□□□□□ -0.34
SPNS3-203ENST00000575185 AMELXQ99217 191 aa12.93□□□□□ -0.34
SPNS3-203ENST00000575185 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.92□□□□□ -0.34
SPNS3-203ENST00000575185 HSBP1O75506 76 aa12.92□□□□□ -0.34
SPNS3-203ENST00000575185 ATP5LO75964 103 aa12.91□□□□□ -0.34
SPNS3-203ENST00000575185 SEC11AP67812 179 aa12.91□□□□□ -0.34
SPNS3-203ENST00000575185 COX7A2LO14548 114 aa12.9□□□□□ -0.34
SPNS3-203ENST00000575185 A0A096LNI7 61 aa12.89□□□□□ -0.35
SPNS3-203ENST00000575185 IGHV1-58A0A0C4DH39 117 aa12.89□□□□□ -0.35
SPNS3-203ENST00000575185 MALP21145 153 aa12.89□□□□□ -0.35
SPNS3-203ENST00000575185 A0A096LNJ9 63 aa12.88□□□□□ -0.35
SPNS3-203ENST00000575185 APOMO95445 188 aa12.88□□□□□ -0.35
SPNS3-203ENST00000575185 UBE2D1P51668 147 aa12.88□□□□□ -0.35
SPNS3-203ENST00000575185 REG3GQ6UW15 175 aa12.88□□□□□ -0.35
SPNS3-203ENST00000575185 SPINK6Q6UWN8 80 aa12.88□□□□□ -0.35
SPNS3-203ENST00000575185 LINC00173Q6ZV60 143 aa12.88□□□□□ -0.35
SPNS3-203ENST00000575185 PMVKQ15126 192 aa12.87□□□□□ -0.35
SPNS3-203ENST00000575185 PDZD11Q5EBL8 140 aa12.87□□□□□ -0.35
SPNS3-203ENST00000575185 SERF1AO75920 110 aa12.86□□□□□ -0.35
SPNS3-203ENST00000575185 PMCHL1Q16048 86 aa12.86□□□□□ -0.35
SPNS3-203ENST00000575185 LINC00242Q5T6M2 205 aa12.86□□□□□ -0.35
SPNS3-203ENST00000575185 FAM19A3Q7Z5A8 133 aa12.86□□□□□ -0.35
SPNS3-203ENST00000575185 IGHV3OR16-9A0A0B4J2B5 98 aa12.85□□□□□ -0.35
SPNS3-203ENST00000575185 HIST1H2BKO60814 126 aa12.85□□□□□ -0.35
SPNS3-203ENST00000575185 HIST1H2BJP06899 126 aa12.85□□□□□ -0.35
SPNS3-203ENST00000575185 HIST1H2BOP23527 126 aa12.85□□□□□ -0.35
SPNS3-203ENST00000575185 HIST1H2BBP33778 126 aa12.85□□□□□ -0.35
SPNS3-203ENST00000575185 HIST1H2BDP58876 126 aa12.85□□□□□ -0.35
SPNS3-203ENST00000575185 HIST1H2BCP62807 126 aa12.85□□□□□ -0.35
SPNS3-203ENST00000575185 HIST2H2BEQ16778 126 aa12.85□□□□□ -0.35
SPNS3-203ENST00000575185 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.85□□□□□ -0.35
SPNS3-203ENST00000575185 HIST1H2BHQ93079 126 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms