RNA–Protein interactions for RNA: ENST00000573924.1

RPA1-205, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-205ENST00000573924 XCL1P47992 114 aa4.43□□□□□ -1.7
RPA1-205ENST00000573924 PRR4Q16378 134 aa4.43□□□□□ -1.7
RPA1-205ENST00000573924 C1orf137Q5JT78 98 aa4.43□□□□□ -1.7
RPA1-205ENST00000573924 EIF5A2Q9GZV4 153 aaKnown RBP4.43□□□□□ -1.7
RPA1-205ENST00000573924 GFRA4Q9GZZ7 299 aa4.43□□□□□ -1.7
RPA1-205ENST00000573924 RAB19A4D1S5 217 aa4.42□□□□□ -1.7
RPA1-205ENST00000573924 IGLC6P0CF74 106 aa4.42□□□□□ -1.7
RPA1-205ENST00000573924 NTF3P20783 257 aa4.42□□□□□ -1.7
RPA1-205ENST00000573924 CENPWQ5EE01 88 aa4.42□□□□□ -1.7
RPA1-205ENST00000573924 MRAP2Q96G30 205 aa4.42□□□□□ -1.7
RPA1-205ENST00000573924 CAMK2N2Q96S95 79 aa4.42□□□□□ -1.7
RPA1-205ENST00000573924 LINC00959A0A1B0GUT2 108 aa4.41□□□□□ -1.7
RPA1-205ENST00000573924 C1orf196B1AJZ1 125 aa4.41□□□□□ -1.7
RPA1-205ENST00000573924 TMEM250H0YL14 139 aa4.41□□□□□ -1.7
RPA1-205ENST00000573924 I3L3M4 83 aa4.41□□□□□ -1.7
RPA1-205ENST00000573924 COX7A2LO14548 114 aa4.41□□□□□ -1.7
RPA1-205ENST00000573924 PMCHP20382 165 aa4.41□□□□□ -1.7
RPA1-205ENST00000573924 CEBPGP53567 150 aa4.41□□□□□ -1.7
RPA1-205ENST00000573924 HERV-K104P63124 156 aa4.41□□□□□ -1.7
RPA1-205ENST00000573924 IMMP2LQ96T52 175 aa4.41□□□□□ -1.7
RPA1-205ENST00000573924 TNXBP22105 4242 aa4.41□□□□□ -1.7
RPA1-205ENST00000573924 A0A087WZ39 114 aa4.4□□□□□ -1.71
RPA1-205ENST00000573924 A0A0U1RRA0 63 aa4.4□□□□□ -1.71
RPA1-205ENST00000573924 HSBP1L1C9JCN9 74 aa4.4□□□□□ -1.71
RPA1-205ENST00000573924 H0Y9J4 135 aa4.4□□□□□ -1.71
RPA1-205ENST00000573924 IGLV7-43P04211 117 aa4.4□□□□□ -1.71
RPA1-205ENST00000573924 RPL18AQ02543 176 aaKnown RBP4.4□□□□□ -1.71
RPA1-205ENST00000573924 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
RPA1-205ENST00000573924 LYZL1Q6UWQ5 148 aa4.4□□□□□ -1.71
RPA1-205ENST00000573924 C2orf48Q96LS8 159 aa4.4□□□□□ -1.71
RPA1-205ENST00000573924 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.39□□□□□ -1.71
RPA1-205ENST00000573924 IGKV2-29A2NJV5 120 aaPredicted RBP4.39□□□□□ -1.71
RPA1-205ENST00000573924 SDHAF1A6NFY7 115 aa4.39□□□□□ -1.71
RPA1-205ENST00000573924 ESDP10768 282 aa4.39□□□□□ -1.71
RPA1-205ENST00000573924 PEA15Q15121 130 aa4.39□□□□□ -1.71
RPA1-205ENST00000573924 C9orf116Q5BN46 136 aaPredicted RBP4.39□□□□□ -1.71
RPA1-205ENST00000573924 BORCS7Q96B45 105 aa4.39□□□□□ -1.71
RPA1-205ENST00000573924 SMIM7Q9BQ49 75 aa4.39□□□□□ -1.71
RPA1-205ENST00000573924 CARHSP1Q9Y2V2 147 aaKnown RBP4.39□□□□□ -1.71
RPA1-205ENST00000573924 TRBV20OR9-2A0A075B6H5 130 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 C19orf71A6NCJ1 209 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 PCP4L1A6NKN8 68 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 ZNF727A8MUV8 499 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 PPP1R17O96001 155 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 TSHBP01222 138 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 CTRLP40313 264 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 TMEM241Q24JQ0 296 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 MRPL52Q86TS9 123 aaKnown RBP4.38□□□□□ -1.71
RPA1-205ENST00000573924 GATD1Q8NB37 220 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 NUP35Q8NFH5 326 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 ST20Q9HBF5 79 aa4.38□□□□□ -1.71
RPA1-205ENST00000573924 A8MWL6 223 aa4.37□□□□□ -1.71
RPA1-205ENST00000573924 K7EN84 100 aa4.37□□□□□ -1.71
RPA1-205ENST00000573924 SRP19P09132 144 aaKnown RBP4.37□□□□□ -1.71
RPA1-205ENST00000573924 UBE2BP63146 152 aa4.37□□□□□ -1.71
RPA1-205ENST00000573924 FAM74A3Q4VXF1 159 aa4.37□□□□□ -1.71
RPA1-205ENST00000573924 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
RPA1-205ENST00000573924 OR10D4PQ8NGN7 298 aa4.37□□□□□ -1.71
RPA1-205ENST00000573924 LINC00526Q96FQ7 95 aa4.37□□□□□ -1.71
RPA1-205ENST00000573924 CNFNQ9BYD5 112 aa4.37□□□□□ -1.71
RPA1-205ENST00000573924 RNASE7Q9H1E1 156 aaKnown RBP4.37□□□□□ -1.71
RPA1-205ENST00000573924 SMDT1Q9H4I9 107 aa4.37□□□□□ -1.71
RPA1-205ENST00000573924 RPP21Q9H633 154 aaKnown RBP4.37□□□□□ -1.71
RPA1-205ENST00000573924 CDC42SE2Q9NRR3 84 aa4.37□□□□□ -1.71
RPA1-205ENST00000573924 TRBV6-5A0A0K0K1A5 114 aa4.36□□□□□ -1.71
RPA1-205ENST00000573924 A0A1W2PNN7 141 aa4.36□□□□□ -1.71
RPA1-205ENST00000573924 C7orf77A4D0Y5 90 aa4.36□□□□□ -1.71
RPA1-205ENST00000573924 NDUFA1O15239 70 aa4.36□□□□□ -1.71
RPA1-205ENST00000573924 FCER1GP30273 86 aa4.36□□□□□ -1.71
RPA1-205ENST00000573924 FAM231DQ6ZW35 169 aa4.36□□□□□ -1.71
RPA1-205ENST00000573924 CSDC2Q9Y534 153 aaKnown RBP4.36□□□□□ -1.71
RPA1-205ENST00000573924 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
RPA1-205ENST00000573924 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.35□□□□□ -1.71
RPA1-205ENST00000573924 TCAPO15273 167 aa4.35□□□□□ -1.71
RPA1-205ENST00000573924 RAB4AP20338 218 aa4.35□□□□□ -1.71
RPA1-205ENST00000573924 IFITM2Q01629 132 aa4.35□□□□□ -1.71
RPA1-205ENST00000573924 SPAG11BQ08648 103 aa4.35□□□□□ -1.71
RPA1-205ENST00000573924 PHF5AQ7RTV0 110 aaKnown RBP4.35□□□□□ -1.71
RPA1-205ENST00000573924 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
RPA1-205ENST00000573924 KIR2DL4Q99706 377 aa4.35□□□□□ -1.71
RPA1-205ENST00000573924 MRPL35Q9NZE8 188 aaKnown RBP4.35□□□□□ -1.71
RPA1-205ENST00000573924 TRBV27A0A0K0K1C4 114 aa4.34□□□□□ -1.71
RPA1-205ENST00000573924 H0Y8G0 127 aa4.34□□□□□ -1.71
RPA1-205ENST00000573924 ADIRFQ15847 76 aa4.34□□□□□ -1.71
RPA1-205ENST00000573924 LINC01551Q86U37 167 aa4.34□□□□□ -1.71
RPA1-205ENST00000573924 OSTCQ9NRP0 149 aa4.34□□□□□ -1.71
RPA1-205ENST00000573924 NAT8Q9UHE5 227 aa4.34□□□□□ -1.71
RPA1-205ENST00000573924 TRAV13-1A0A0B4J241 112 aa4.33□□□□□ -1.72
RPA1-205ENST00000573924 F8W036 122 aa4.33□□□□□ -1.72
RPA1-205ENST00000573924 PPP1R2P9O14990 202 aa4.33□□□□□ -1.72
RPA1-205ENST00000573924 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
RPA1-205ENST00000573924 RPL23P62829 140 aaKnown RBP4.33□□□□□ -1.72
RPA1-205ENST00000573924 KIAA1644Q3SXP7 199 aa4.33□□□□□ -1.72
RPA1-205ENST00000573924 TMEM242Q9NWH2 141 aa4.33□□□□□ -1.72
RPA1-205ENST00000573924 A0A1B0GUT8 65 aa4.32□□□□□ -1.72
RPA1-205ENST00000573924 HIGD1CA8MV81 97 aa4.32□□□□□ -1.72
RPA1-205ENST00000573924 LINC00587B1AMM8 73 aa4.32□□□□□ -1.72
RPA1-205ENST00000573924 C9JQL5 133 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms