RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 Q6ZUT4 128 aa7.69□□□□□ -1.18
CCDC40-210ENST00000573903 STPG4Q8N801 248 aa7.69□□□□□ -1.18
CCDC40-210ENST00000573903 Q8N8P6 123 aa7.69□□□□□ -1.18
CCDC40-210ENST00000573903 PRSS3P2Q8NHM4 247 aa7.69□□□□□ -1.18
CCDC40-210ENST00000573903 GNB1LQ9BYB4 327 aa7.69□□□□□ -1.18
CCDC40-210ENST00000573903 NXT2Q9NPJ8 142 aaKnown RBP7.69□□□□□ -1.18
CCDC40-210ENST00000573903 LINC00474Q9P2X8 69 aa7.69□□□□□ -1.18
CCDC40-210ENST00000573903 CCL25O15444 150 aa7.68□□□□□ -1.18
CCDC40-210ENST00000573903 XCL1P47992 114 aa7.68□□□□□ -1.18
CCDC40-210ENST00000573903 RPL39P62891 51 aaKnown RBP7.68□□□□□ -1.18
CCDC40-210ENST00000573903 PRR3P79522 188 aaKnown RBP7.68□□□□□ -1.18
CCDC40-210ENST00000573903 ORMDL2Q53FV1 153 aa7.68□□□□□ -1.18
CCDC40-210ENST00000573903 C1orf196B1AJZ1 125 aa7.67□□□□□ -1.18
CCDC40-210ENST00000573903 KIAA1644Q3SXP7 199 aa7.67□□□□□ -1.18
CCDC40-210ENST00000573903 A0A096LNI7 61 aa7.66□□□□□ -1.18
CCDC40-210ENST00000573903 IGHV1-58A0A0C4DH39 117 aa7.66□□□□□ -1.18
CCDC40-210ENST00000573903 MRPS36P82909 103 aaKnown RBP7.66□□□□□ -1.18
CCDC40-210ENST00000573903 FOXI1Q12951 378 aa7.66□□□□□ -1.18
CCDC40-210ENST00000573903 RNASE13Q5GAN3 156 aaKnown RBP7.66□□□□□ -1.18
CCDC40-210ENST00000573903 CD164L2Q6UWJ8 174 aa7.66□□□□□ -1.18
CCDC40-210ENST00000573903 CARD19Q96LW7 228 aa7.66□□□□□ -1.18
CCDC40-210ENST00000573903 MRPL18Q9H0U6 180 aaKnown RBP7.66□□□□□ -1.18
CCDC40-210ENST00000573903 CYSLTR1Q9Y271 337 aa7.66□□□□□ -1.18
CCDC40-210ENST00000573903 TRAV13-1A0A0B4J241 112 aa7.65□□□□□ -1.18
CCDC40-210ENST00000573903 IFITM10A6NMD0 228 aa7.65□□□□□ -1.18
CCDC40-210ENST00000573903 G0S2P27469 103 aa7.65□□□□□ -1.18
CCDC40-210ENST00000573903 FABP9Q0Z7S8 132 aa7.65□□□□□ -1.18
CCDC40-210ENST00000573903 REG3GQ6UW15 175 aa7.65□□□□□ -1.18
CCDC40-210ENST00000573903 LINC01600Q96MT4 127 aa7.65□□□□□ -1.18
CCDC40-210ENST00000573903 PYGO1Q9Y3Y4 419 aa7.65□□□□□ -1.18
CCDC40-210ENST00000573903 TGIF2-C20orf24A0A0A6YYL0 155 aa7.64□□□□□ -1.19
CCDC40-210ENST00000573903 ZNF561-AS1K7EIQ3 104 aa7.64□□□□□ -1.19
CCDC40-210ENST00000573903 C2orf66Q6UXQ4 117 aa7.64□□□□□ -1.19
CCDC40-210ENST00000573903 Q6ZN92 141 aa7.64□□□□□ -1.19
CCDC40-210ENST00000573903 COX7A2LO14548 114 aa7.63□□□□□ -1.19
CCDC40-210ENST00000573903 MALP21145 153 aa7.63□□□□□ -1.19
CCDC40-210ENST00000573903 SPINK6Q6UWN8 80 aa7.63□□□□□ -1.19
CCDC40-210ENST00000573903 TEX43Q6ZNM6 134 aa7.63□□□□□ -1.19
CCDC40-210ENST00000573903 TMEM141Q96I45 108 aa7.63□□□□□ -1.19
CCDC40-210ENST00000573903 C2orf88Q9BSF0 95 aa7.63□□□□□ -1.19
CCDC40-210ENST00000573903 ALKBH7Q9BT30 221 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-210ENST00000573903 TRAPPC1Q9Y5R8 145 aa7.63□□□□□ -1.19
CCDC40-210ENST00000573903 UBR4Q5T4S7 5183 aa7.62□□□□□ -1.19
CCDC40-210ENST00000573903 IGLV4-3A0A075B6K6 122 aa7.62□□□□□ -1.19
CCDC40-210ENST00000573903 LINC01549A6NIU2 74 aa7.62□□□□□ -1.19
CCDC40-210ENST00000573903 NPSP0C0P6 89 aa7.62□□□□□ -1.19
CCDC40-210ENST00000573903 SYCNQ0VAF6 134 aa7.62□□□□□ -1.19
CCDC40-210ENST00000573903 PAPPA-AS1Q5QFB9 102 aa7.62□□□□□ -1.19
CCDC40-210ENST00000573903 Q6ZRP5 223 aa7.62□□□□□ -1.19
CCDC40-210ENST00000573903 SMCO4Q9NRQ5 59 aa7.62□□□□□ -1.19
CCDC40-210ENST00000573903 A0A0J9YXV3 536 aa7.61□□□□□ -1.19
CCDC40-210ENST00000573903 APOMO95445 188 aa7.61□□□□□ -1.19
CCDC40-210ENST00000573903 FA2HQ7L5A8 372 aa7.61□□□□□ -1.19
CCDC40-210ENST00000573903 LINC00526Q96FQ7 95 aa7.61□□□□□ -1.19
CCDC40-210ENST00000573903 OPRPNQ99935 248 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-210ENST00000573903 TIMM17AQ99595 171 aa7.6□□□□□ -1.19
CCDC40-210ENST00000573903 LOC107984640A0A0U1RRK4 108 aa7.59□□□□□ -1.19
CCDC40-210ENST00000573903 SLC7A5P1Q8MH63 180 aa7.59□□□□□ -1.19
CCDC40-210ENST00000573903 FAM104AQ969W3 186 aa7.59□□□□□ -1.19
CCDC40-210ENST00000573903 TOMM6Q96B49 74 aa7.59□□□□□ -1.19
CCDC40-210ENST00000573903 VCX2Q9H322 139 aa7.59□□□□□ -1.19
CCDC40-210ENST00000573903 LINC01546A6NGU7 62 aa7.58□□□□□ -1.2
CCDC40-210ENST00000573903 PTTG1IPP53801 180 aa7.58□□□□□ -1.2
CCDC40-210ENST00000573903 GAGE2BQ13066 116 aa7.58□□□□□ -1.2
CCDC40-210ENST00000573903 C5orf38Q86SI9 138 aa7.58□□□□□ -1.2
CCDC40-210ENST00000573903 CBLN2Q8IUK8 224 aa7.58□□□□□ -1.2
CCDC40-210ENST00000573903 IGLV4-69A0A075B6H9 119 aa7.57□□□□□ -1.2
CCDC40-210ENST00000573903 IGIPA6NJ69 53 aa7.57□□□□□ -1.2
CCDC40-210ENST00000573903 SPAG11BQ08648 103 aa7.57□□□□□ -1.2
CCDC40-210ENST00000573903 OR10D4PQ8NGN7 298 aa7.57□□□□□ -1.2
CCDC40-210ENST00000573903 C18orf32Q8TCD1 76 aa7.57□□□□□ -1.2
CCDC40-210ENST00000573903 SCGB3A1Q96QR1 104 aa7.57□□□□□ -1.2
CCDC40-210ENST00000573903 CAMK2N2Q96S95 79 aa7.57□□□□□ -1.2
CCDC40-210ENST00000573903 AMELXQ99217 191 aa7.57□□□□□ -1.2
CCDC40-210ENST00000573903 IGHV3OR16-9A0A0B4J2B5 98 aa7.56□□□□□ -1.2
CCDC40-210ENST00000573903 UBE2D1P51668 147 aa7.56□□□□□ -1.2
CCDC40-210ENST00000573903 SEC11AP67812 179 aa7.56□□□□□ -1.2
CCDC40-210ENST00000573903 LINC00173Q6ZV60 143 aa7.56□□□□□ -1.2
CCDC40-210ENST00000573903 ERASQ7Z444 233 aa7.56□□□□□ -1.2
CCDC40-210ENST00000573903 YPEL4Q96NS1 127 aa7.56□□□□□ -1.2
CCDC40-210ENST00000573903 RAB5BP61020 215 aa7.55□□□□□ -1.2
CCDC40-210ENST00000573903 RPL18AQ02543 176 aaKnown RBP7.55□□□□□ -1.2
CCDC40-210ENST00000573903 LINC00242Q5T6M2 205 aa7.55□□□□□ -1.2
CCDC40-210ENST00000573903 ORAOV1Q8WV07 137 aa7.55□□□□□ -1.2
CCDC40-210ENST00000573903 A0A087WZ39 114 aa7.54□□□□□ -1.2
CCDC40-210ENST00000573903 KRTAP10-8P60410 259 aa7.54□□□□□ -1.2
CCDC40-210ENST00000573903 SRSF9Q13242 221 aaKnown RBP eCLIP7.54□□□□□ -1.2
CCDC40-210ENST00000573903 ODF1Q14990 250 aa7.54□□□□□ -1.2
CCDC40-210ENST00000573903 C2orf48Q96LS8 159 aa7.54□□□□□ -1.2
CCDC40-210ENST00000573903 TNXBP22105 4242 aa7.53□□□□□ -1.2
CCDC40-210ENST00000573903 F8WDY8 70 aa7.53□□□□□ -1.2
CCDC40-210ENST00000573903 HBDP02042 147 aa7.53□□□□□ -1.2
CCDC40-210ENST00000573903 LINC00614P0C842 121 aa7.53□□□□□ -1.2
CCDC40-210ENST00000573903 HERVK_113P63121 156 aa7.53□□□□□ -1.2
CCDC40-210ENST00000573903 ZC2HC1BQ5TFG8 222 aa7.53□□□□□ -1.2
CCDC40-210ENST00000573903 LINC01561Q8N1V8 128 aa7.53□□□□□ -1.2
CCDC40-210ENST00000573903 GEMIN7Q9H840 131 aaKnown RBP7.53□□□□□ -1.2
CCDC40-210ENST00000573903 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.52□□□□□ -1.21
CCDC40-210ENST00000573903 C9orf116Q5BN46 136 aaPredicted RBP7.52□□□□□ -1.21
CCDC40-210ENST00000573903 FAM19A3Q7Z5A8 133 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms