RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 CLLU1Q5K131 121 aa10.84□□□□□ -0.67
SMG6-214ENST00000573827 SERTAD4-AS1Q5TG53 156 aa10.84□□□□□ -0.67
SMG6-214ENST00000573827 ANAPC16Q96DE5 110 aa10.84□□□□□ -0.67
SMG6-214ENST00000573827 PKIGQ9Y2B9 76 aa10.84□□□□□ -0.67
SMG6-214ENST00000573827 PYGO1Q9Y3Y4 419 aa10.84□□□□□ -0.67
SMG6-214ENST00000573827 MT-ND4LP03901 98 aa10.83□□□□□ -0.68
SMG6-214ENST00000573827 IGLV4-3A0A075B6K6 122 aa10.82□□□□□ -0.68
SMG6-214ENST00000573827 LOC107984640A0A0U1RRK4 108 aa10.82□□□□□ -0.68
SMG6-214ENST00000573827 A0A1W2PNN7 141 aa10.82□□□□□ -0.68
SMG6-214ENST00000573827 APOMO95445 188 aa10.82□□□□□ -0.68
SMG6-214ENST00000573827 ADCYAP1P18509 176 aa10.82□□□□□ -0.68
SMG6-214ENST00000573827 SPAG11BQ08648 103 aa10.82□□□□□ -0.68
SMG6-214ENST00000573827 OR10D4PQ8NGN7 298 aa10.82□□□□□ -0.68
SMG6-214ENST00000573827 CAMK2N2Q96S95 79 aa10.82□□□□□ -0.68
SMG6-214ENST00000573827 LAMTOR2Q9Y2Q5 125 aa10.82□□□□□ -0.68
SMG6-214ENST00000573827 IFITM10A6NMD0 228 aa10.81□□□□□ -0.68
SMG6-214ENST00000573827 RAB14P61106 215 aa10.81□□□□□ -0.68
SMG6-214ENST00000573827 IFITM2Q01629 132 aa10.81□□□□□ -0.68
SMG6-214ENST00000573827 RNF151Q2KHN1 245 aa10.81□□□□□ -0.68
SMG6-214ENST00000573827 A0A0J9YXV3 536 aa10.8□□□□□ -0.68
SMG6-214ENST00000573827 GAGE2BQ13066 116 aa10.8□□□□□ -0.68
SMG6-214ENST00000573827 LINC00242Q5T6M2 205 aa10.8□□□□□ -0.68
SMG6-214ENST00000573827 RAB5AP20339 215 aa10.79□□□□□ -0.68
SMG6-214ENST00000573827 SRSF9Q13242 221 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMG6-214ENST00000573827 KIAA0087Q14695 138 aa10.79□□□□□ -0.68
SMG6-214ENST00000573827 C10orf25Q5T742 122 aa10.79□□□□□ -0.68
SMG6-214ENST00000573827 LINC00173Q6ZV60 143 aa10.79□□□□□ -0.68
SMG6-214ENST00000573827 Q8N8P6 123 aa10.79□□□□□ -0.68
SMG6-214ENST00000573827 ORAOV1Q8WV07 137 aa10.79□□□□□ -0.68
SMG6-214ENST00000573827 MRPL35Q9NZE8 188 aaKnown RBP10.79□□□□□ -0.68
SMG6-214ENST00000573827 A0A087WZ39 114 aa10.78□□□□□ -0.68
SMG6-214ENST00000573827 LOC389332A0A1B0GUA5 103 aa10.78□□□□□ -0.68
SMG6-214ENST00000573827 IFI27P40305 119 aaPredicted RBP10.78□□□□□ -0.68
SMG6-214ENST00000573827 IMMP2LQ96T52 175 aa10.77□□□□□ -0.69
SMG6-214ENST00000573827 MAP1LC3AQ9H492 121 aa10.77□□□□□ -0.69
SMG6-214ENST00000573827 F8WDY8 70 aa10.76□□□□□ -0.69
SMG6-214ENST00000573827 UBE2D1P51668 147 aa10.76□□□□□ -0.69
SMG6-214ENST00000573827 C9orf116Q5BN46 136 aaPredicted RBP10.76□□□□□ -0.69
SMG6-214ENST00000573827 ZC2HC1BQ5TFG8 222 aa10.76□□□□□ -0.69
SMG6-214ENST00000573827 TMEM141Q96I45 108 aa10.76□□□□□ -0.69
SMG6-214ENST00000573827 LINC01600Q96MT4 127 aa10.76□□□□□ -0.69
SMG6-214ENST00000573827 AMELXQ99217 191 aa10.76□□□□□ -0.69
SMG6-214ENST00000573827 C6orf48Q9UBA6 75 aa10.76□□□□□ -0.69
SMG6-214ENST00000573827 TMEM218A2RU14 115 aa10.75□□□□□ -0.69
SMG6-214ENST00000573827 IGIPA6NJ69 53 aa10.75□□□□□ -0.69
SMG6-214ENST00000573827 C2orf66Q6UXQ4 117 aa10.75□□□□□ -0.69
SMG6-214ENST00000573827 UNQ6190/PRO20217Q6UXQ8 127 aa10.75□□□□□ -0.69
SMG6-214ENST00000573827 TLX1NBP0CAT3 122 aa10.74□□□□□ -0.69
SMG6-214ENST00000573827 UQCC3Q6UW78 93 aa10.74□□□□□ -0.69
SMG6-214ENST00000573827 Q6ZRP5 223 aa10.74□□□□□ -0.69
SMG6-214ENST00000573827 TGIF2-C20orf24A0A0A6YYL0 155 aa10.73□□□□□ -0.69
SMG6-214ENST00000573827 NDUFA1O15239 70 aa10.73□□□□□ -0.69
SMG6-214ENST00000573827 RPL18AQ02543 176 aaKnown RBP10.73□□□□□ -0.69
SMG6-214ENST00000573827 SPINK6Q6UWN8 80 aa10.73□□□□□ -0.69
SMG6-214ENST00000573827 FAM19A3Q7Z5A8 133 aa10.73□□□□□ -0.69
SMG6-214ENST00000573827 KRTAP7-1Q8IUC3 87 aa10.73□□□□□ -0.69
SMG6-214ENST00000573827 PLA2G2DQ9UNK4 145 aa10.73□□□□□ -0.69
SMG6-214ENST00000573827 CYSLTR1Q9Y271 337 aa10.73□□□□□ -0.69
SMG6-214ENST00000573827 K7EMI3 77 aa10.72□□□□□ -0.69
SMG6-214ENST00000573827 LINC01561Q8N1V8 128 aa10.72□□□□□ -0.69
SMG6-214ENST00000573827 NPSP0C0P6 89 aa10.71□□□□□ -0.69
SMG6-214ENST00000573827 KRTAP10-8P60410 259 aa10.71□□□□□ -0.69
SMG6-214ENST00000573827 ORMDL2Q53FV1 153 aa10.71□□□□□ -0.69
SMG6-214ENST00000573827 TEX43Q6ZNM6 134 aa10.71□□□□□ -0.69
SMG6-214ENST00000573827 PHF5AQ7RTV0 110 aaKnown RBP10.71□□□□□ -0.69
SMG6-214ENST00000573827 KRTAP11-1Q8IUC1 163 aa10.71□□□□□ -0.69
SMG6-214ENST00000573827 CTDSP1Q9GZU7 261 aa10.71□□□□□ -0.69
SMG6-214ENST00000573827 PSORS1C2Q9UIG4 136 aa10.71□□□□□ -0.69
SMG6-214ENST00000573827 FAM168BA1KXE4 195 aa10.7□□□□□ -0.7
SMG6-214ENST00000573827 NXT2Q9NPJ8 142 aaKnown RBP10.7□□□□□ -0.7
SMG6-214ENST00000573827 RNF213Q63HN8 5207 aa10.69□□□□□ -0.7
SMG6-214ENST00000573827 TRAV9-1A0A075B6T8 112 aa10.69□□□□□ -0.7
SMG6-214ENST00000573827 ODF1Q14990 250 aa10.69□□□□□ -0.7
SMG6-214ENST00000573827 KIAA1644Q3SXP7 199 aa10.69□□□□□ -0.7
SMG6-214ENST00000573827 C2orf82Q6UX34 121 aa10.69□□□□□ -0.7
SMG6-214ENST00000573827 SEC11CQ9BY50 192 aa10.68□□□□□ -0.7
SMG6-214ENST00000573827 VCX2Q9H322 139 aa10.68□□□□□ -0.7
SMG6-214ENST00000573827 LINC01546A6NGU7 62 aa10.67□□□□□ -0.7
SMG6-214ENST00000573827 C10orf91Q5T1B1 145 aa10.67□□□□□ -0.7
SMG6-214ENST00000573827 TIMM17AQ99595 171 aa10.67□□□□□ -0.7
SMG6-214ENST00000573827 C2orf88Q9BSF0 95 aa10.67□□□□□ -0.7
SMG6-214ENST00000573827 TRBV30A0A0K0K1B3 111 aa10.66□□□□□ -0.7
SMG6-214ENST00000573827 TOMM6Q96B49 74 aa10.66□□□□□ -0.7
SMG6-214ENST00000573827 Q6ZN92 141 aa10.65□□□□□ -0.7
SMG6-214ENST00000573827 C9orf129Q5T035 196 aaKnown RBP10.64□□□□□ -0.71
SMG6-214ENST00000573827 ALKBH7Q9BT30 221 aaPredicted RBP10.64□□□□□ -0.71
SMG6-214ENST00000573827 GNB1LQ9BYB4 327 aa10.64□□□□□ -0.71
SMG6-214ENST00000573827 NDUFC2-KCTD14E9PQ53 114 aa10.63□□□□□ -0.71
SMG6-214ENST00000573827 GAGE2EQ4V326 116 aa10.63□□□□□ -0.71
SMG6-214ENST00000573827 REG3GQ6UW15 175 aa10.63□□□□□ -0.71
SMG6-214ENST00000573827 GAGE2DQ9UEU5 116 aa10.63□□□□□ -0.71
SMG6-214ENST00000573827 CDKN2A-AS1Q9UH64 79 aa10.63□□□□□ -0.71
SMG6-214ENST00000573827 MT-ND6P03923 174 aa10.62□□□□□ -0.71
SMG6-214ENST00000573827 C1orf137Q5JT78 98 aa10.62□□□□□ -0.71
SMG6-214ENST00000573827 COMMD7Q86VX2 200 aa10.62□□□□□ -0.71
SMG6-214ENST00000573827 ERASQ7Z444 233 aa10.61□□□□□ -0.71
SMG6-214ENST00000573827 FAM19A5Q7Z5A7 132 aaPredicted RBP10.61□□□□□ -0.71
SMG6-214ENST00000573827 Q8IZM0 81 aa10.61□□□□□ -0.71
SMG6-214ENST00000573827 CARHSP1Q9Y2V2 147 aaKnown RBP10.61□□□□□ -0.71
SMG6-214ENST00000573827 G0S2P27469 103 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms