RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 FAM240AA0A1B0GVK7 77 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 H3BT86 120 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 TCL1BO95988 128 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 IGHV3-53P01767 116 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 IGHV3-30-3P0DP02 117 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 CD28P10747 220 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 DEFB1P60022 68 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 ATXN8Q156A1 80 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 MIAQ16674 131 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 SPINK13Q1W4C9 94 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 DEFB112Q30KQ8 113 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 FAM74A4Q5TZK3 123 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 ZFAND6Q6FIF0 208 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 ARL17AQ8IVW1 177 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 LRRC75A-AS1Q8N1F1 130 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 ZNF418Q8TF45 676 aaPredicted RBP3.32□□□□□ -1.88
CDC27-215ENST00000573550 C4orf3Q8WVX3 66 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 ZNF702PQ9H963 129 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 ERG28Q9UKR5 140 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 CSDC2Q9Y534 153 aaKnown RBP3.32□□□□□ -1.88
CDC27-215ENST00000573550 ANKRD17O75179 2603 aaKnown RBP3.32□□□□□ -1.88
CDC27-215ENST00000573550 TRBV10-1A0A0K0K1A3 114 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 H3BMM0 161 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 NDUFA1O15239 70 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 SLC25A20O43772 301 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 INSP01308 110 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 MRPL23Q16540 153 aaKnown RBP3.31□□□□□ -1.88
CDC27-215ENST00000573550 Q6ZUT4 128 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 VSIG2Q96IQ7 327 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 GTSF1LQ9H1H1 148 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 UBE2D4Q9Y2X8 147 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 IGSF10Q6WRI0 2623 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 MYO9AB2RTY4 2548 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 NACAE9PAV3 2078 aa3.31□□□□□ -1.88
CDC27-215ENST00000573550 UBR5O95071 2799 aaPredicted RBP3.3□□□□□ -1.88
CDC27-215ENST00000573550 ACACBO00763 2458 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 IGKV3-7A0A075B6H7 116 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 TRAV12-2A0A075B6T6 113 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 TRBV10-2A0A0K0K1G8 114 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 RS1O15537 224 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 LY6G6DO95868 133 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 COX6CP09669 75 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 RBMY1A1P0DJD3 496 aaKnown RBP3.3□□□□□ -1.88
CDC27-215ENST00000573550 RBMY1CP0DJD4 496 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 SCGB1C2P0DMR2 95 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 PSMB2P49721 201 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 SYNJ2BPP57105 145 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 HERVK_113P63121 156 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 RBMY1FQ15415 496 aaKnown RBP3.3□□□□□ -1.88
CDC27-215ENST00000573550 Q6Q795 121 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 CD164L2Q6UWJ8 174 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 KRTAP11-1Q8IUC1 163 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 TMEM61Q8N0U2 210 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 ANKRD29Q8N6D5 301 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 C11orf72Q8NBR9 251 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 FAM104AQ969W3 186 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 CARD19Q96LW7 228 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 CHCHD7Q9BUK0 85 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 NDUFA12Q9UI09 145 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 LRRK2Q5S007 2527 aa3.3□□□□□ -1.88
CDC27-215ENST00000573550 ASH1LQ9NR48 2969 aaKnown RBP3.3□□□□□ -1.88
CDC27-215ENST00000573550 USP9YO00507 2555 aaPredicted RBP3.29□□□□□ -1.88
CDC27-215ENST00000573550 A0A0J9YXV3 536 aa3.29□□□□□ -1.88
CDC27-215ENST00000573550 SPINK8P0C7L1 97 aa3.29□□□□□ -1.88
CDC27-215ENST00000573550 INSL3P51460 131 aa3.29□□□□□ -1.88
CDC27-215ENST00000573550 EMP1P54849 157 aa3.29□□□□□ -1.88
CDC27-215ENST00000573550 CMC4P56277 68 aaPredicted RBP3.29□□□□□ -1.88
CDC27-215ENST00000573550 DAZ2Q13117 558 aaKnown RBP3.29□□□□□ -1.88
CDC27-215ENST00000573550 LINC01620Q4KN68 170 aa3.29□□□□□ -1.88
CDC27-215ENST00000573550 DEFB121Q5J5C9 76 aa3.29□□□□□ -1.88
CDC27-215ENST00000573550 SFTA2Q6UW10 78 aa3.29□□□□□ -1.88
CDC27-215ENST00000573550 DAZ4Q86SG3 579 aaKnown RBP3.29□□□□□ -1.88
CDC27-215ENST00000573550 CITED1Q99966 193 aa3.29□□□□□ -1.88
CDC27-215ENST00000573550 Q9HAA7 133 aa3.29□□□□□ -1.88
CDC27-215ENST00000573550 DAZ3Q9NR90 486 aaKnown RBP3.29□□□□□ -1.88
CDC27-215ENST00000573550 RELNP78509 3460 aa3.29□□□□□ -1.88
CDC27-215ENST00000573550 SPG11Q96JI7 2443 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 CR1P17927 2039 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 IGHV3OR16-12A0A075B7B8 117 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 TRAV4A0A0B4J268 109 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 RBMY1BA6NDE4 496 aaKnown RBP3.28□□□□□ -1.88
CDC27-215ENST00000573550 RBMY1EA6NEQ0 496 aaKnown RBP3.28□□□□□ -1.88
CDC27-215ENST00000573550 C9JAW5 83 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 LST1O00453 97 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 RBMY1DP0C7P1 496 aaKnown RBP3.28□□□□□ -1.88
CDC27-215ENST00000573550 DEFB131AP59861 70 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 HERV-K104P63124 156 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 CIRBPQ14011 172 aaKnown RBP3.28□□□□□ -1.88
CDC27-215ENST00000573550 FAM222AQ5U5X8 452 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 MUSTN1Q8IVN3 82 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 UBE2WQ96B02 151 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 GEMIN7Q9H840 131 aaKnown RBP3.28□□□□□ -1.88
CDC27-215ENST00000573550 ANAPC11Q9NYG5 84 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 ICOSQ9Y6W8 199 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 CSPG4Q6UVK1 2322 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 NAV2Q8IVL1 2488 aa3.28□□□□□ -1.88
CDC27-215ENST00000573550 TRAV26-1A0A087WT03 109 aa3.27□□□□□ -1.89
CDC27-215ENST00000573550 TGFAP01135 160 aa3.27□□□□□ -1.89
CDC27-215ENST00000573550 ACYP1P07311 99 aa3.27□□□□□ -1.89
CDC27-215ENST00000573550 CKS1BP61024 79 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms