RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 UBE2D1P51668 147 aa4.49□□□□□ -1.69
SMG6-209ENST00000571442 LINC00310P59036 64 aa4.49□□□□□ -1.69
SMG6-209ENST00000571442 C14orf177Q52M58 125 aa4.49□□□□□ -1.69
SMG6-209ENST00000571442 C9orf163Q8N9P6 203 aa4.49□□□□□ -1.69
SMG6-209ENST00000571442 TMEM141Q96I45 108 aa4.49□□□□□ -1.69
SMG6-209ENST00000571442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.49□□□□□ -1.69
SMG6-209ENST00000571442 VPS13BQ7Z7G8 4022 aa4.49□□□□□ -1.69
SMG6-209ENST00000571442 IGHV1-58A0A0C4DH39 117 aa4.48□□□□□ -1.69
SMG6-209ENST00000571442 SMR3BP02814 79 aaPredicted RBP4.48□□□□□ -1.69
SMG6-209ENST00000571442 CNBPP62633 177 aaKnown RBP4.48□□□□□ -1.69
SMG6-209ENST00000571442 SMAGPQ0VAQ4 97 aa4.48□□□□□ -1.69
SMG6-209ENST00000571442 SDIM1Q6ZPB5 146 aa4.48□□□□□ -1.69
SMG6-209ENST00000571442 FA2HQ7L5A8 372 aa4.48□□□□□ -1.69
SMG6-209ENST00000571442 TIMM17AQ99595 171 aa4.48□□□□□ -1.69
SMG6-209ENST00000571442 IGLV4-69A0A075B6H9 119 aa4.47□□□□□ -1.69
SMG6-209ENST00000571442 COX7A2LO14548 114 aa4.47□□□□□ -1.69
SMG6-209ENST00000571442 NUPR1O60356 82 aa4.47□□□□□ -1.69
SMG6-209ENST00000571442 LINC00614P0C842 121 aa4.47□□□□□ -1.69
SMG6-209ENST00000571442 CHTF8P0CG12 524 aa4.47□□□□□ -1.69
SMG6-209ENST00000571442 TEX43Q6ZNM6 134 aa4.47□□□□□ -1.69
SMG6-209ENST00000571442 SCXQ7RTU7 201 aa4.47□□□□□ -1.69
SMG6-209ENST00000571442 ERASQ7Z444 233 aa4.47□□□□□ -1.69
SMG6-209ENST00000571442 SCGB3A1Q96QR1 104 aa4.47□□□□□ -1.69
SMG6-209ENST00000571442 AP5S1Q9NUS5 200 aa4.47□□□□□ -1.69
SMG6-209ENST00000571442 IGHV3-64A0A075B6Q5 118 aa4.46□□□□□ -1.7
SMG6-209ENST00000571442 A0A0J9YXV3 536 aa4.46□□□□□ -1.7
SMG6-209ENST00000571442 EPM2AB3EWF7 344 aa4.46□□□□□ -1.7
SMG6-209ENST00000571442 KIAA0087Q14695 138 aa4.46□□□□□ -1.7
SMG6-209ENST00000571442 PDZD11Q5EBL8 140 aa4.46□□□□□ -1.7
SMG6-209ENST00000571442 C10orf25Q5T742 122 aa4.46□□□□□ -1.7
SMG6-209ENST00000571442 CFAP161Q6P656 301 aa4.46□□□□□ -1.7
SMG6-209ENST00000571442 Q6ZRU5 148 aa4.46□□□□□ -1.7
SMG6-209ENST00000571442 FAM19A3Q7Z5A8 133 aa4.46□□□□□ -1.7
SMG6-209ENST00000571442 CIRBP-AS1Q8TBR5 109 aa4.46□□□□□ -1.7
SMG6-209ENST00000571442 VCX2Q9H322 139 aa4.46□□□□□ -1.7
SMG6-209ENST00000571442 FLG2Q5D862 2391 aaPredicted RBP4.46□□□□□ -1.7
SMG6-209ENST00000571442 A0A087WZ39 114 aa4.45□□□□□ -1.7
SMG6-209ENST00000571442 NPSP0C0P6 89 aa4.45□□□□□ -1.7
SMG6-209ENST00000571442 MALP21145 153 aa4.45□□□□□ -1.7
SMG6-209ENST00000571442 SPAG11BQ08648 103 aa4.45□□□□□ -1.7
SMG6-209ENST00000571442 Q6ZN92 141 aa4.45□□□□□ -1.7
SMG6-209ENST00000571442 ORAOV1Q8WV07 137 aa4.45□□□□□ -1.7
SMG6-209ENST00000571442 CST9LQ9H4G1 147 aa4.45□□□□□ -1.7
SMG6-209ENST00000571442 CDKN2A-AS1Q9UH64 79 aa4.45□□□□□ -1.7
SMG6-209ENST00000571442 PKHD1L1Q86WI1 4243 aa4.45□□□□□ -1.7
SMG6-209ENST00000571442 HERC1Q15751 4861 aa4.44□□□□□ -1.7
SMG6-209ENST00000571442 A0A096LNI7 61 aa4.44□□□□□ -1.7
SMG6-209ENST00000571442 HBDP02042 147 aa4.44□□□□□ -1.7
SMG6-209ENST00000571442 SYCNQ0VAF6 134 aa4.44□□□□□ -1.7
SMG6-209ENST00000571442 CIRBPQ14011 172 aaKnown RBP4.44□□□□□ -1.7
SMG6-209ENST00000571442 FAM19A2Q8N3H0 131 aa4.44□□□□□ -1.7
SMG6-209ENST00000571442 CARD19Q96LW7 228 aa4.44□□□□□ -1.7
SMG6-209ENST00000571442 C2orf88Q9BSF0 95 aa4.44□□□□□ -1.7
SMG6-209ENST00000571442 CHAC1Q9BUX1 264 aa4.44□□□□□ -1.7
SMG6-209ENST00000571442 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.43□□□□□ -1.7
SMG6-209ENST00000571442 ZNF561-AS1K7EIQ3 104 aa4.43□□□□□ -1.7
SMG6-209ENST00000571442 ATP6V1G1O75348 118 aa4.43□□□□□ -1.7
SMG6-209ENST00000571442 SERF1AO75920 110 aa4.43□□□□□ -1.7
SMG6-209ENST00000571442 G0S2P27469 103 aa4.43□□□□□ -1.7
SMG6-209ENST00000571442 KRTAP10-4P60372 401 aaPredicted RBP4.43□□□□□ -1.7
SMG6-209ENST00000571442 PMVKQ15126 192 aa4.43□□□□□ -1.7
SMG6-209ENST00000571442 Q5VSD8 79 aa4.43□□□□□ -1.7
SMG6-209ENST00000571442 C2orf82Q6UX34 121 aa4.43□□□□□ -1.7
SMG6-209ENST00000571442 UNQ6190/PRO20217Q6UXQ8 127 aa4.43□□□□□ -1.7
SMG6-209ENST00000571442 SPACA4Q8TDM5 124 aa4.43□□□□□ -1.7
SMG6-209ENST00000571442 CHCHD1Q96BP2 118 aaKnown RBP4.43□□□□□ -1.7
SMG6-209ENST00000571442 C6orf48Q9UBA6 75 aa4.43□□□□□ -1.7
SMG6-209ENST00000571442 MYCBP2O75592 4640 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 IGLV5-45A0A087WSX0 123 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 A0A087WYN8 130 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.42□□□□□ -1.7
SMG6-209ENST00000571442 IGKV2-24A0A0C4DH68 120 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 TINCRA0A1B0GVN0 87 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 SMIM1B2RUZ4 78 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 HIST1H2BKO60814 126 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 APOMO95445 188 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 HIST1H2BJP06899 126 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 INAFM2P0DMQ5 153 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 IGLC3P0DOY3 106 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 HIST1H2BOP23527 126 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 HIST1H2BBP33778 126 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 HIST1H2BDP58876 126 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 RAB5BP61020 215 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 HIST1H2BCP62807 126 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 HIST2H2BEQ16778 126 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.42□□□□□ -1.7
SMG6-209ENST00000571442 BAGE3Q86Y29 109 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 LINC00528Q8N1L1 170 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 OR10D4PQ8NGN7 298 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 HIST1H2BHQ93079 126 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 C2orf48Q96LS8 159 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 CAMK2N2Q96S95 79 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 HIST1H2BNQ99877 126 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 HIST1H2BMQ99879 126 aa4.42□□□□□ -1.7
SMG6-209ENST00000571442 C11orf86A6NJI1 115 aa4.41□□□□□ -1.7
SMG6-209ENST00000571442 SPINK8P0C7L1 97 aa4.41□□□□□ -1.7
SMG6-209ENST00000571442 ZNF22P17026 224 aaPredicted RBP4.41□□□□□ -1.7
SMG6-209ENST00000571442 NDUFA6P56556 154 aa4.41□□□□□ -1.7
SMG6-209ENST00000571442 HERVK_113P63121 156 aa4.41□□□□□ -1.7
SMG6-209ENST00000571442 C9orf116Q5BN46 136 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms