RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 IGLV1-50A0A075B6I6 118 aa7.21□□□□□ -1.26
CAPN3-220ENST00000569827 IGHV3OR16-9A0A0B4J2B5 98 aa7.21□□□□□ -1.26
CAPN3-220ENST00000569827 TSPAN13O95857 204 aa7.21□□□□□ -1.26
CAPN3-220ENST00000569827 IMMP2LQ96T52 175 aa7.21□□□□□ -1.26
CAPN3-220ENST00000569827 V9GYV3 84 aa7.21□□□□□ -1.26
CAPN3-220ENST00000569827 RIGQ13278 110 aa7.2□□□□□ -1.26
CAPN3-220ENST00000569827 C2orf82Q6UX34 121 aa7.2□□□□□ -1.26
CAPN3-220ENST00000569827 TIMM21Q9BVV7 248 aa7.2□□□□□ -1.26
CAPN3-220ENST00000569827 SMDT1Q9H4I9 107 aa7.2□□□□□ -1.26
CAPN3-220ENST00000569827 IFITM10A6NMD0 228 aa7.19□□□□□ -1.26
CAPN3-220ENST00000569827 ZNF727A8MUV8 499 aa7.19□□□□□ -1.26
CAPN3-220ENST00000569827 TCAPO15273 167 aa7.19□□□□□ -1.26
CAPN3-220ENST00000569827 SMAGPQ0VAQ4 97 aa7.19□□□□□ -1.26
CAPN3-220ENST00000569827 C9orf129Q5T035 196 aaKnown RBP7.19□□□□□ -1.26
CAPN3-220ENST00000569827 OSTCQ9NRP0 149 aa7.19□□□□□ -1.26
CAPN3-220ENST00000569827 MUC17Q685J3 4493 aa7.19□□□□□ -1.26
CAPN3-220ENST00000569827 TLX1NBP0CAT3 122 aa7.18□□□□□ -1.26
CAPN3-220ENST00000569827 FAM104BQ5XKR9 115 aa7.18□□□□□ -1.26
CAPN3-220ENST00000569827 TCTE3Q8IZS6 198 aa7.18□□□□□ -1.26
CAPN3-220ENST00000569827 TMEM18Q96B42 140 aa7.18□□□□□ -1.26
CAPN3-220ENST00000569827 FAM210AQ96ND0 272 aa7.18□□□□□ -1.26
CAPN3-220ENST00000569827 EIF5A2Q9GZV4 153 aaKnown RBP7.18□□□□□ -1.26
CAPN3-220ENST00000569827 PPP1R2P9O14990 202 aa7.17□□□□□ -1.26
CAPN3-220ENST00000569827 TNFRSF6BO95407 300 aa7.17□□□□□ -1.26
CAPN3-220ENST00000569827 KIAA0087Q14695 138 aa7.17□□□□□ -1.26
CAPN3-220ENST00000569827 D6R8Y8 96 aa7.16□□□□□ -1.26
CAPN3-220ENST00000569827 NPYP01303 97 aa7.16□□□□□ -1.26
CAPN3-220ENST00000569827 SRP19P09132 144 aaKnown RBP7.16□□□□□ -1.26
CAPN3-220ENST00000569827 CKS2P33552 79 aa7.16□□□□□ -1.26
CAPN3-220ENST00000569827 HBBP68871 147 aa7.16□□□□□ -1.26
CAPN3-220ENST00000569827 BLOC1S1P78537 153 aa7.16□□□□□ -1.26
CAPN3-220ENST00000569827 ZC2HC1BQ5TFG8 222 aa7.16□□□□□ -1.26
CAPN3-220ENST00000569827 LINC00469Q8N7U9 141 aa7.16□□□□□ -1.26
CAPN3-220ENST00000569827 SMIM2Q9BVW6 85 aa7.16□□□□□ -1.26
CAPN3-220ENST00000569827 TGIF2-C20orf24A0A0A6YYL0 155 aa7.15□□□□□ -1.26
CAPN3-220ENST00000569827 PPP1R17O96001 155 aa7.15□□□□□ -1.26
CAPN3-220ENST00000569827 TMEM241Q24JQ0 296 aa7.15□□□□□ -1.26
CAPN3-220ENST00000569827 MRPL54Q6P161 138 aaKnown RBP7.15□□□□□ -1.26
CAPN3-220ENST00000569827 SPANXA1Q9NS26 97 aa7.15□□□□□ -1.26
CAPN3-220ENST00000569827 NAT8BQ9UHF3 227 aa7.15□□□□□ -1.26
CAPN3-220ENST00000569827 A0A087X002 238 aa7.14□□□□□ -1.27
CAPN3-220ENST00000569827 RPL13AP40429 203 aaKnown RBP7.14□□□□□ -1.27
CAPN3-220ENST00000569827 RPL23P62829 140 aaKnown RBP7.14□□□□□ -1.27
CAPN3-220ENST00000569827 MRPS36P82909 103 aaKnown RBP7.14□□□□□ -1.27
CAPN3-220ENST00000569827 ADIRFQ15847 76 aa7.14□□□□□ -1.27
CAPN3-220ENST00000569827 FAM74A3Q4VXF1 159 aa7.14□□□□□ -1.27
CAPN3-220ENST00000569827 C20orf78Q9BR46 151 aa7.14□□□□□ -1.27
CAPN3-220ENST00000569827 TRBV24-1A0A075B6N3 115 aa7.13□□□□□ -1.27
CAPN3-220ENST00000569827 NDUFC2-KCTD14E9PQ53 114 aa7.13□□□□□ -1.27
CAPN3-220ENST00000569827 F8WDY8 70 aa7.13□□□□□ -1.27
CAPN3-220ENST00000569827 LINC00242Q5T6M2 205 aa7.13□□□□□ -1.27
CAPN3-220ENST00000569827 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
CAPN3-220ENST00000569827 XAGE1AQ9HD64 81 aa7.13□□□□□ -1.27
CAPN3-220ENST00000569827 IGLV4-3A0A075B6K6 122 aa7.12□□□□□ -1.27
CAPN3-220ENST00000569827 A0A0U1RQV1 116 aa7.12□□□□□ -1.27
CAPN3-220ENST00000569827 ZNF861PO60384 105 aa7.12□□□□□ -1.27
CAPN3-220ENST00000569827 RPL32P62910 135 aaKnown RBP7.12□□□□□ -1.27
CAPN3-220ENST00000569827 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-220ENST00000569827 PACRGQ96M98 296 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-220ENST00000569827 ANAPC11Q9NYG5 84 aa7.12□□□□□ -1.27
CAPN3-220ENST00000569827 TOMM7Q9P0U1 55 aa7.12□□□□□ -1.27
CAPN3-220ENST00000569827 TRBV30A0A0K0K1B3 111 aa7.11□□□□□ -1.27
CAPN3-220ENST00000569827 SMIM27A0A1W2PRY6 76 aa7.11□□□□□ -1.27
CAPN3-220ENST00000569827 LINC00862A6NCI5 91 aa7.11□□□□□ -1.27
CAPN3-220ENST00000569827 CTDSP1Q9GZU7 261 aa7.11□□□□□ -1.27
CAPN3-220ENST00000569827 hCG_2014768A0A024R1R8 64 aa7.1□□□□□ -1.27
CAPN3-220ENST00000569827 C9JQL5 133 aa7.1□□□□□ -1.27
CAPN3-220ENST00000569827 IFI27P40305 119 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-220ENST00000569827 C22orf24Q9Y442 160 aa7.1□□□□□ -1.27
CAPN3-220ENST00000569827 LOC389332A0A1B0GUA5 103 aa7.09□□□□□ -1.27
CAPN3-220ENST00000569827 LINC00173Q6ZV60 143 aa7.09□□□□□ -1.27
CAPN3-220ENST00000569827 TMEM141Q96I45 108 aa7.09□□□□□ -1.27
CAPN3-220ENST00000569827 CARHSP1Q9Y2V2 147 aaKnown RBP7.09□□□□□ -1.27
CAPN3-220ENST00000569827 SRSF3P84103 164 aaKnown RBP7.08□□□□□ -1.28
CAPN3-220ENST00000569827 KRTAP9-6A0A140TA67 174 aa7.07□□□□□ -1.28
CAPN3-220ENST00000569827 A0A1B0GXF2 115 aa7.07□□□□□ -1.28
CAPN3-220ENST00000569827 RPL37AP8A6NKH3 93 aa7.07□□□□□ -1.28
CAPN3-220ENST00000569827 RAB5AP20339 215 aa7.07□□□□□ -1.28
CAPN3-220ENST00000569827 TEX43Q6ZNM6 134 aa7.07□□□□□ -1.28
CAPN3-220ENST00000569827 AKAP14Q86UN6 197 aa7.07□□□□□ -1.28
CAPN3-220ENST00000569827 TYMSOSQ8TAI1 123 aa7.07□□□□□ -1.28
CAPN3-220ENST00000569827 PRELID3AQ96N28 172 aa7.07□□□□□ -1.28
CAPN3-220ENST00000569827 NAT8Q9UHE5 227 aa7.07□□□□□ -1.28
CAPN3-220ENST00000569827 NUPR1O60356 82 aa7.06□□□□□ -1.28
CAPN3-220ENST00000569827 PRSS2P07478 247 aa7.06□□□□□ -1.28
CAPN3-220ENST00000569827 A0A1B0GW15 77 aa7.05□□□□□ -1.28
CAPN3-220ENST00000569827 GAGE10A6NGK3 116 aa7.05□□□□□ -1.28
CAPN3-220ENST00000569827 F8W036 122 aa7.05□□□□□ -1.28
CAPN3-220ENST00000569827 CKS1BP61024 79 aa7.05□□□□□ -1.28
CAPN3-220ENST00000569827 KRTAP13-2Q52LG2 175 aa7.05□□□□□ -1.28
CAPN3-220ENST00000569827 TMEM136Q6ZRR5 245 aa7.05□□□□□ -1.28
CAPN3-220ENST00000569827 ORMDL3Q8N138 153 aa7.05□□□□□ -1.28
CAPN3-220ENST00000569827 PYGO1Q9Y3Y4 419 aa7.05□□□□□ -1.28
CAPN3-220ENST00000569827 BCE1O60756 84 aa7.04□□□□□ -1.28
CAPN3-220ENST00000569827 CRYGAP11844 174 aa7.04□□□□□ -1.28
CAPN3-220ENST00000569827 C6orf226Q5I0X4 101 aa7.04□□□□□ -1.28
CAPN3-220ENST00000569827 Q6ZN92 141 aa7.04□□□□□ -1.28
CAPN3-220ENST00000569827 MRPL55Q7Z7F7 128 aaKnown RBP7.04□□□□□ -1.28
CAPN3-220ENST00000569827 C2orf88Q9BSF0 95 aa7.04□□□□□ -1.28
CAPN3-220ENST00000569827 ALKBH7Q9BT30 221 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms