RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ZNF664Q8N3J9 261 aa9.61□□□□□ -0.87
COMMD4-225ENST00000569245 OPRPNQ99935 248 aaPredicted RBP9.61□□□□□ -0.87
COMMD4-225ENST00000569245 ABCA13Q86UQ4 5058 aa9.6□□□□□ -0.87
COMMD4-225ENST00000569245 IGLV4-60A0A075B6I1 120 aa9.6□□□□□ -0.87
COMMD4-225ENST00000569245 CRPP02741 224 aa9.6□□□□□ -0.87
COMMD4-225ENST00000569245 ANGP03950 147 aaKnown RBP9.6□□□□□ -0.87
COMMD4-225ENST00000569245 PRSS1P07477 247 aa9.6□□□□□ -0.87
COMMD4-225ENST00000569245 KRTAP10-1P60331 282 aa9.6□□□□□ -0.87
COMMD4-225ENST00000569245 KRTDAPP60985 99 aa9.6□□□□□ -0.87
COMMD4-225ENST00000569245 PMVKQ15126 192 aa9.6□□□□□ -0.87
COMMD4-225ENST00000569245 PET117Q6UWS5 81 aa9.6□□□□□ -0.87
COMMD4-225ENST00000569245 Q6ZUT4 128 aa9.6□□□□□ -0.87
COMMD4-225ENST00000569245 Q8N976 141 aa9.6□□□□□ -0.87
COMMD4-225ENST00000569245 NTN5Q8WTR8 489 aaPredicted RBP9.6□□□□□ -0.87
COMMD4-225ENST00000569245 VCX2Q9H322 139 aa9.6□□□□□ -0.87
COMMD4-225ENST00000569245 TEX43Q6ZNM6 134 aa9.59□□□□□ -0.87
COMMD4-225ENST00000569245 CST9LQ9H4G1 147 aa9.59□□□□□ -0.87
COMMD4-225ENST00000569245 KRTAP17-1Q9BYP8 105 aa9.58□□□□□ -0.88
COMMD4-225ENST00000569245 WFDC2Q14508 124 aa9.57□□□□□ -0.88
COMMD4-225ENST00000569245 LINC01545Q5VT33 79 aa9.57□□□□□ -0.88
COMMD4-225ENST00000569245 C2orf88Q9BSF0 95 aa9.57□□□□□ -0.88
COMMD4-225ENST00000569245 C1orf43Q9BWL3 253 aa9.57□□□□□ -0.88
COMMD4-225ENST00000569245 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.56□□□□□ -0.88
COMMD4-225ENST00000569245 ODF1Q14990 250 aa9.56□□□□□ -0.88
COMMD4-225ENST00000569245 RNASE13Q5GAN3 156 aaKnown RBP9.56□□□□□ -0.88
COMMD4-225ENST00000569245 ZC2HC1BQ5TFG8 222 aa9.56□□□□□ -0.88
COMMD4-225ENST00000569245 ENHOQ6UWT2 76 aa9.56□□□□□ -0.88
COMMD4-225ENST00000569245 KRTAP4-5Q9BYR2 181 aa9.56□□□□□ -0.88
COMMD4-225ENST00000569245 C20orf202A1L168 122 aa9.55□□□□□ -0.88
COMMD4-225ENST00000569245 F8VRH5 84 aa9.55□□□□□ -0.88
COMMD4-225ENST00000569245 H0Y8G0 127 aa9.55□□□□□ -0.88
COMMD4-225ENST00000569245 AKR1D1P51857 326 aa9.55□□□□□ -0.88
COMMD4-225ENST00000569245 JOSD1Q15040 202 aaPredicted RBP9.55□□□□□ -0.88
COMMD4-225ENST00000569245 FAM19A3Q7Z5A8 133 aa9.55□□□□□ -0.88
COMMD4-225ENST00000569245 Q8N1X5 172 aa9.55□□□□□ -0.88
COMMD4-225ENST00000569245 PRR34Q9NV39 138 aa9.55□□□□□ -0.88
COMMD4-225ENST00000569245 CHTOPQ9Y3Y2 248 aaKnown RBP9.55□□□□□ -0.88
COMMD4-225ENST00000569245 UBE2D1P51668 147 aa9.54□□□□□ -0.88
COMMD4-225ENST00000569245 CLPSL2Q6UWE3 100 aa9.54□□□□□ -0.88
COMMD4-225ENST00000569245 LINC00269Q8N2A0 174 aa9.54□□□□□ -0.88
COMMD4-225ENST00000569245 CCL25O15444 150 aa9.53□□□□□ -0.88
COMMD4-225ENST00000569245 XGP55808 180 aa9.53□□□□□ -0.88
COMMD4-225ENST00000569245 REG3AQ06141 175 aa9.53□□□□□ -0.88
COMMD4-225ENST00000569245 MIAQ16674 131 aa9.53□□□□□ -0.88
COMMD4-225ENST00000569245 MRPL35Q9NZE8 188 aaKnown RBP9.53□□□□□ -0.88
COMMD4-225ENST00000569245 IGLV4-69A0A075B6H9 119 aa9.52□□□□□ -0.89
COMMD4-225ENST00000569245 LINC00959A0A1B0GUT2 108 aa9.52□□□□□ -0.89
COMMD4-225ENST00000569245 SCGB1D1O95968 90 aa9.52□□□□□ -0.89
COMMD4-225ENST00000569245 IGLC3P0DOY3 106 aa9.52□□□□□ -0.89
COMMD4-225ENST00000569245 TRAV13-1A0A0B4J241 112 aa9.51□□□□□ -0.89
COMMD4-225ENST00000569245 A0A0J9YXV3 536 aa9.51□□□□□ -0.89
COMMD4-225ENST00000569245 PLNP26678 52 aa9.51□□□□□ -0.89
COMMD4-225ENST00000569245 SEC11AP67812 179 aa9.51□□□□□ -0.89
COMMD4-225ENST00000569245 PYY3Q5JQD4 70 aa9.51□□□□□ -0.89
COMMD4-225ENST00000569245 LINC00242Q5T6M2 205 aa9.51□□□□□ -0.89
COMMD4-225ENST00000569245 PMCHL2Q9BQD1 86 aa9.51□□□□□ -0.89
COMMD4-225ENST00000569245 TINCRA0A1B0GVN0 87 aa9.5□□□□□ -0.89
COMMD4-225ENST00000569245 EPM2AB3EWF7 344 aa9.5□□□□□ -0.89
COMMD4-225ENST00000569245 DPM2O94777 84 aa9.5□□□□□ -0.89
COMMD4-225ENST00000569245 HAMPP81172 84 aa9.5□□□□□ -0.89
COMMD4-225ENST00000569245 SS18Q15532 418 aa9.5□□□□□ -0.89
COMMD4-225ENST00000569245 C14orf177Q52M58 125 aa9.5□□□□□ -0.89
COMMD4-225ENST00000569245 TRAV8-4A0A0B4J246 113 aa9.49□□□□□ -0.89
COMMD4-225ENST00000569245 IGKV3OR2-268A0A0C4DH90 116 aa9.49□□□□□ -0.89
COMMD4-225ENST00000569245 IGKCP01834 107 aa9.49□□□□□ -0.89
COMMD4-225ENST00000569245 HERVK_113P63121 156 aa9.49□□□□□ -0.89
COMMD4-225ENST00000569245 IGLV10-54A0A075B6I4 117 aa9.48□□□□□ -0.89
COMMD4-225ENST00000569245 IGLV5-45A0A087WSX0 123 aa9.48□□□□□ -0.89
COMMD4-225ENST00000569245 C11orf86A6NJI1 115 aa9.48□□□□□ -0.89
COMMD4-225ENST00000569245 SMR3BP02814 79 aaPredicted RBP9.48□□□□□ -0.89
COMMD4-225ENST00000569245 LINC01620Q4KN68 170 aa9.48□□□□□ -0.89
COMMD4-225ENST00000569245 CHAC1Q9BUX1 264 aa9.48□□□□□ -0.89
COMMD4-225ENST00000569245 USP17L23D6RBM5 183 aa9.47□□□□□ -0.89
COMMD4-225ENST00000569245 SMIM6P0DI80 62 aa9.47□□□□□ -0.89
COMMD4-225ENST00000569245 GEMIN7Q9H840 131 aaKnown RBP9.47□□□□□ -0.89
COMMD4-225ENST00000569245 FAM30AQ9NZY2 134 aa9.47□□□□□ -0.89
COMMD4-225ENST00000569245 ZNF22P17026 224 aaPredicted RBP9.46□□□□□ -0.9
COMMD4-225ENST00000569245 COX6A2Q02221 97 aa9.46□□□□□ -0.9
COMMD4-225ENST00000569245 CD164L2Q6UWJ8 174 aa9.46□□□□□ -0.9
COMMD4-225ENST00000569245 CHCHD10Q8WYQ3 142 aaPredicted RBP9.46□□□□□ -0.9
COMMD4-225ENST00000569245 IGHV3OR16-9A0A0B4J2B5 98 aa9.45□□□□□ -0.9
COMMD4-225ENST00000569245 FAM229AH3BQW9 127 aa9.44□□□□□ -0.9
COMMD4-225ENST00000569245 XCL1P47992 114 aa9.44□□□□□ -0.9
COMMD4-225ENST00000569245 Q5VSD8 79 aa9.44□□□□□ -0.9
COMMD4-225ENST00000569245 ATOH7Q8N100 152 aa9.44□□□□□ -0.9
COMMD4-225ENST00000569245 LINC00469Q8N7U9 141 aa9.44□□□□□ -0.9
COMMD4-225ENST00000569245 CDKN2A-AS1Q9UH64 79 aa9.44□□□□□ -0.9
COMMD4-225ENST00000569245 FAT1Q14517 4588 aa9.44□□□□□ -0.9
COMMD4-225ENST00000569245 H3BRM9 83 aa9.43□□□□□ -0.9
COMMD4-225ENST00000569245 FOXI1Q12951 378 aa9.43□□□□□ -0.9
COMMD4-225ENST00000569245 TMEM170BQ5T4T1 132 aa9.43□□□□□ -0.9
COMMD4-225ENST00000569245 KRTAP26-1Q6PEX3 210 aa9.43□□□□□ -0.9
COMMD4-225ENST00000569245 LINC01561Q8N1V8 128 aa9.43□□□□□ -0.9
COMMD4-225ENST00000569245 A0A087WZ39 114 aa9.42□□□□□ -0.9
COMMD4-225ENST00000569245 TMEM223A0PJW6 202 aa9.42□□□□□ -0.9
COMMD4-225ENST00000569245 GAGE12HA6NDE8 117 aa9.42□□□□□ -0.9
COMMD4-225ENST00000569245 DNAH8Q96JB1 4490 aa9.42□□□□□ -0.9
COMMD4-225ENST00000569245 hDV102S1A0JD36 115 aa9.41□□□□□ -0.9
COMMD4-225ENST00000569245 STPG4Q8N801 248 aa9.41□□□□□ -0.9
COMMD4-225ENST00000569245 HSBP1L1C9JCN9 74 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms