RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 LAMA3Q16787 3333 aa5.15□□□□□ -1.59
CNOT1-216ENST00000569240 KIF25-AS1Q9Y6Z4 181 aa5.15□□□□□ -1.59
CNOT1-216ENST00000569240 ZGRF1Q86YA3 2104 aa5.15□□□□□ -1.59
CNOT1-216ENST00000569240 ATG2AQ2TAZ0 1938 aa5.15□□□□□ -1.59
CNOT1-216ENST00000569240 LCA10Q71F78 164 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 PRR15Q8IV56 129 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 PLA2G2CQ5R387 149 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 WFDC13Q8IUB5 93 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 FAM19A4Q96LR4 140 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 H0Y9P7 68 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 ZFP36P26651 326 aaKnown RBP5.14□□□□□ -1.59
CNOT1-216ENST00000569240 SLURP1P55000 103 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 PRR9Q5T870 116 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 C2orf48Q96LS8 159 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 GAS8-AS1O95177 125 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 IGHV4-59P01825 116 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 C4orf48Q5BLP8 95 aa5.14□□□□□ -1.59
CNOT1-216ENST00000569240 PRB1P04280 392 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 LY6HO94772 140 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 MSMPQ1L6U9 139 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 C22orf34Q6ZV56 151 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 PRR14LQ5THK1 2151 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 TNCP24821 2201 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 C11orf72Q8NBR9 251 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 CACNA1HO95180 2353 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 MED13Q9UHV7 2174 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 XIRP2A4UGR9 3374 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 C7orf65Q6ZTY9 151 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 PKDREJQ9NTG1 2253 aa5.13□□□□□ -1.59
CNOT1-216ENST00000569240 IGLV1-40P01703 118 aa5.12□□□□□ -1.59
CNOT1-216ENST00000569240 RANBP2P49792 3224 aaKnown RBP5.12□□□□□ -1.59
CNOT1-216ENST00000569240 PCNX3Q9H6A9 2034 aa5.12□□□□□ -1.59
CNOT1-216ENST00000569240 SPAG11AQ6PDA7 123 aa5.12□□□□□ -1.59
CNOT1-216ENST00000569240 Q6ZQT0 140 aa5.12□□□□□ -1.59
CNOT1-216ENST00000569240 LINC00474Q9P2X8 69 aa5.12□□□□□ -1.59
CNOT1-216ENST00000569240 LINC00337Q8N6G1 96 aa5.11□□□□□ -1.59
CNOT1-216ENST00000569240 A0A096LPF7 62 aa5.11□□□□□ -1.59
CNOT1-216ENST00000569240 FHL2Q14192 279 aa5.11□□□□□ -1.59
CNOT1-216ENST00000569240 EP300Q09472 2414 aaPredicted RBP5.11□□□□□ -1.59
CNOT1-216ENST00000569240 LINC00336Q6ZUF6 198 aa5.1□□□□□ -1.59
CNOT1-216ENST00000569240 Q6ZSV7 163 aa5.1□□□□□ -1.59
CNOT1-216ENST00000569240 CACNA1EQ15878 2313 aa5.1□□□□□ -1.59
CNOT1-216ENST00000569240 CADP27708 2225 aa5.1□□□□□ -1.59
CNOT1-216ENST00000569240 LMO4P61968 165 aa5.1□□□□□ -1.59
CNOT1-216ENST00000569240 PRR4Q16378 134 aa5.1□□□□□ -1.59
CNOT1-216ENST00000569240 ARHGAP21Q5T5U3 1957 aa5.09□□□□□ -1.59
CNOT1-216ENST00000569240 KPRPQ5T749 579 aaPredicted RBP5.09□□□□□ -1.59
CNOT1-216ENST00000569240 ZNF843Q8N446 348 aa5.09□□□□□ -1.59
CNOT1-216ENST00000569240 ACYP2P14621 99 aa5.09□□□□□ -1.59
CNOT1-216ENST00000569240 PLA2G5P39877 138 aa5.09□□□□□ -1.59
CNOT1-216ENST00000569240 SPATA3Q8NHX4 192 aa5.09□□□□□ -1.59
CNOT1-216ENST00000569240 C10orf142B7Z368 130 aa5.09□□□□□ -1.59
CNOT1-216ENST00000569240 C1orf64Q8NEQ6 169 aa5.09□□□□□ -1.59
CNOT1-216ENST00000569240 NUP210LQ5VU65 1888 aa5.09□□□□□ -1.6
CNOT1-216ENST00000569240 IGHV4-61A0A0C4DH41 118 aa5.09□□□□□ -1.6
CNOT1-216ENST00000569240 KLK9Q2XQG4 91 aa5.09□□□□□ -1.6
CNOT1-216ENST00000569240 C2orf16Q68DN1 1984 aa5.09□□□□□ -1.6
CNOT1-216ENST00000569240 LINC01548A6NM66 108 aa5.09□□□□□ -1.6
CNOT1-216ENST00000569240 NANOS2P60321 138 aaKnown RBP5.08□□□□□ -1.6
CNOT1-216ENST00000569240 IGHV4-38-2P0DP08 117 aa5.08□□□□□ -1.6
CNOT1-216ENST00000569240 FREM1Q5H8C1 2179 aa5.08□□□□□ -1.6
CNOT1-216ENST00000569240 DSCAML1Q8TD84 2053 aa5.08□□□□□ -1.6
CNOT1-216ENST00000569240 EML5Q05BV3 1969 aa5.08□□□□□ -1.6
CNOT1-216ENST00000569240 CYSRT1A8MQ03 144 aa5.08□□□□□ -1.6
CNOT1-216ENST00000569240 RNF223E7ERA6 249 aa5.08□□□□□ -1.6
CNOT1-216ENST00000569240 H7BZZ5 65 aa5.08□□□□□ -1.6
CNOT1-216ENST00000569240 COL6A3P12111 3177 aa5.08□□□□□ -1.6
CNOT1-216ENST00000569240 LINC00315P59091 139 aa5.07□□□□□ -1.6
CNOT1-216ENST00000569240 KIAA1549LQ6ZVL6 1849 aa5.07□□□□□ -1.6
CNOT1-216ENST00000569240 XAGE1AQ9HD64 81 aa5.07□□□□□ -1.6
CNOT1-216ENST00000569240 LOC101927531A0A1B0GV80 90 aa5.07□□□□□ -1.6
CNOT1-216ENST00000569240 SPANXA2-OT1Q8N9U9 137 aa5.07□□□□□ -1.6
CNOT1-216ENST00000569240 IL17DQ8TAD2 202 aa5.07□□□□□ -1.6
CNOT1-216ENST00000569240 DEFB1P60022 68 aa5.07□□□□□ -1.6
CNOT1-216ENST00000569240 WDFY3Q8IZQ1 3526 aa5.07□□□□□ -1.6
CNOT1-216ENST00000569240 ABCA4P78363 2273 aa5.06□□□□□ -1.6
CNOT1-216ENST00000569240 LY6G6DO95868 133 aa5.06□□□□□ -1.6
CNOT1-216ENST00000569240 HCFC1P51610 2035 aa5.06□□□□□ -1.6
CNOT1-216ENST00000569240 ZNF702PQ9H963 129 aa5.06□□□□□ -1.6
CNOT1-216ENST00000569240 MYO15AQ9UKN7 3530 aa5.06□□□□□ -1.6
CNOT1-216ENST00000569240 A0A1B0GU69 56 aa5.06□□□□□ -1.6
CNOT1-216ENST00000569240 Q6ZTC4 211 aa5.06□□□□□ -1.6
CNOT1-216ENST00000569240 DYSFO75923 2080 aa5.06□□□□□ -1.6
CNOT1-216ENST00000569240 Q6YL49 198 aa5.06□□□□□ -1.6
CNOT1-216ENST00000569240 Q8N2B8 174 aa5.06□□□□□ -1.6
CNOT1-216ENST00000569240 LITAFQ99732 161 aa5.06□□□□□ -1.6
CNOT1-216ENST00000569240 F8W735 103 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-216ENST00000569240 CEP350Q5VT06 3117 aa5.05□□□□□ -1.6
CNOT1-216ENST00000569240 AGRNO00468 2067 aa5.05□□□□□ -1.6
CNOT1-216ENST00000569240 ZDBF2Q9HCK1 2354 aa5.05□□□□□ -1.6
CNOT1-216ENST00000569240 Q8NBF4 154 aa5.05□□□□□ -1.6
CNOT1-216ENST00000569240 IGHV3OR16-9A0A0B4J2B5 98 aa5.05□□□□□ -1.6
CNOT1-216ENST00000569240 C9orf116Q5BN46 136 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-216ENST00000569240 Q1T7F1 81 aa5.05□□□□□ -1.6
CNOT1-216ENST00000569240 COX6A2Q02221 97 aa5.05□□□□□ -1.6
CNOT1-216ENST00000569240 FHL3Q13643 280 aa5.05□□□□□ -1.6
CNOT1-216ENST00000569240 LRCOL1A6NCL2 159 aa5.05□□□□□ -1.6
CNOT1-216ENST00000569240 DEFB136Q30KP8 78 aa5.04□□□□□ -1.6
CNOT1-216ENST00000569240 NOTCH3Q9UM47 2321 aa5.04□□□□□ -1.6
CNOT1-216ENST00000569240 COL6A6A6NMZ7 2263 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms