RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 C11orf72Q8NBR9 251 aa4.41□□□□□ -1.7
PTPN9-205ENST00000568108 HIST1H4GQ99525 98 aa4.41□□□□□ -1.7
PTPN9-205ENST00000568108 PRADC1Q9BSG0 188 aa4.41□□□□□ -1.7
PTPN9-205ENST00000568108 TM2D2Q9BX73 214 aa4.41□□□□□ -1.7
PTPN9-205ENST00000568108 FAM30AQ9NZY2 134 aa4.41□□□□□ -1.7
PTPN9-205ENST00000568108 TRAV4A0A0B4J268 109 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 PLAC8L1A1L4L8 177 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 ZNF815PA8K554 130 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 FABP2P12104 132 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 LGALS3P17931 250 aaKnown RBP4.4□□□□□ -1.71
PTPN9-205ENST00000568108 KRTAP10-2P60368 255 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 RPL36AP83881 106 aaKnown RBP4.4□□□□□ -1.71
PTPN9-205ENST00000568108 TTC32Q5I0X7 151 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 TMEM170BQ5T4T1 132 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 LYRM7Q5U5X0 104 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 UFSP1Q6NVU6 142 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 OR5A1Q8NGJ0 315 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.71
PTPN9-205ENST00000568108 PLEKHB2Q96CS7 222 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 TP73-AS1Q9UF72 201 aa4.4□□□□□ -1.71
PTPN9-205ENST00000568108 IGLV4-69A0A075B6H9 119 aa4.39□□□□□ -1.71
PTPN9-205ENST00000568108 TRGV1A0A0A0MS02 117 aa4.39□□□□□ -1.71
PTPN9-205ENST00000568108 GAGE10A6NGK3 116 aa4.39□□□□□ -1.71
PTPN9-205ENST00000568108 RPL39P62891 51 aaKnown RBP4.39□□□□□ -1.71
PTPN9-205ENST00000568108 DAZ2Q13117 558 aaKnown RBP4.39□□□□□ -1.71
PTPN9-205ENST00000568108 DAZ4Q86SG3 579 aaKnown RBP4.39□□□□□ -1.71
PTPN9-205ENST00000568108 RNASE8Q8TDE3 154 aaKnown RBP4.39□□□□□ -1.71
PTPN9-205ENST00000568108 TIMM21Q9BVV7 248 aa4.39□□□□□ -1.71
PTPN9-205ENST00000568108 NOP10Q9NPE3 64 aaKnown RBP4.39□□□□□ -1.71
PTPN9-205ENST00000568108 DAZ3Q9NR90 486 aaKnown RBP4.39□□□□□ -1.71
PTPN9-205ENST00000568108 MRPL16Q9NX20 251 aaKnown RBP4.39□□□□□ -1.71
PTPN9-205ENST00000568108 LRP1BQ9NZR2 4599 aa4.39□□□□□ -1.71
PTPN9-205ENST00000568108 DMBT1Q9UGM3 2413 aaPredicted RBP4.38□□□□□ -1.71
PTPN9-205ENST00000568108 IGLV4-3A0A075B6K6 122 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 TRBV7-3A0A075B6L6 115 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 TRAV26-1A0A087WT03 109 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 IGHV3-73A0A0B4J1V6 119 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 A0A1W2PPM0 123 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 EPM2AB3EWF7 344 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 K7EP34 96 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 K7EQD1 137 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 LEPROTO15243 131 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 PLA2G1BP04054 148 aaKnown RBP4.38□□□□□ -1.71
PTPN9-205ENST00000568108 MRPS36P82909 103 aaKnown RBP4.38□□□□□ -1.71
PTPN9-205ENST00000568108 SRSF9Q13242 221 aaKnown RBP eCLIP4.38□□□□□ -1.71
PTPN9-205ENST00000568108 ESRGQ1W209 222 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 AMMECR1LQ6DCA0 310 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 DGAT2L7PQ6IED9 249 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 KRTAP1-5Q9BYS1 174 aa4.38□□□□□ -1.71
PTPN9-205ENST00000568108 SPANXB1Q9NS25 103 aaPredicted RBP4.38□□□□□ -1.71
PTPN9-205ENST00000568108 NHP2Q9NX24 153 aaKnown RBP4.38□□□□□ -1.71
PTPN9-205ENST00000568108 A0A0J9YY99 117 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 TINCRA0A1B0GVN0 87 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 TMEM223A0PJW6 202 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 B5MCH6 92 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 TMEM238C9JI98 176 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 H3BUT2 72 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 H7C423 109 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 J3QQQ9 107 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 CCL25O15444 150 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 INAFM2P0DMQ5 153 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 RAB37Q96AX2 223 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 AMELXQ99217 191 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 UPK3BQ9BT76 320 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 GEMIN7Q9H840 131 aaKnown RBP4.37□□□□□ -1.71
PTPN9-205ENST00000568108 SPCS1Q9Y6A9 102 aa4.37□□□□□ -1.71
PTPN9-205ENST00000568108 APOBP04114 4563 aaKnown RBP4.37□□□□□ -1.71
PTPN9-205ENST00000568108 DNAH5Q8TE73 4624 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 TRGV2A0A075B6R0 118 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 A0A1B0GWB2 263 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 TRBV6-4A0A1B0GX49 114 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 GAGE12BA1L429 117 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 K7EP13 123 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 UBE2L6O14933 153 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 GAGE7O76087 117 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 GAGE12FP0CL80 117 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 GAGE12GP0CL81 117 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 GAGE12IP0CL82 117 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 ZNF22P17026 224 aaPredicted RBP4.36□□□□□ -1.71
PTPN9-205ENST00000568108 FXYD2P54710 66 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 HERVK_113P63121 156 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 RPL24P83731 157 aaKnown RBP4.36□□□□□ -1.71
PTPN9-205ENST00000568108 LINC00612Q8N6U2 182 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 COPS9Q8WXC6 57 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 TMEM101Q96IK0 257 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 TTTY13Q9BZ97 58 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 UBE2D4Q9Y2X8 147 aa4.36□□□□□ -1.71
PTPN9-205ENST00000568108 CSDC2Q9Y534 153 aaKnown RBP4.36□□□□□ -1.71
PTPN9-205ENST00000568108 TRGV4A0A0C4DH28 118 aa4.35□□□□□ -1.71
PTPN9-205ENST00000568108 H3BNG1 76 aa4.35□□□□□ -1.71
PTPN9-205ENST00000568108 K7ERU9 68 aa4.35□□□□□ -1.71
PTPN9-205ENST00000568108 FUSP35637 526 aaKnown RBP eCLIP4.35□□□□□ -1.71
PTPN9-205ENST00000568108 Q6ZVH6 145 aa4.35□□□□□ -1.71
PTPN9-205ENST00000568108 SLC25A29Q8N8R3 303 aa4.35□□□□□ -1.71
PTPN9-205ENST00000568108 ZNF479Q96JC4 524 aa4.35□□□□□ -1.71
PTPN9-205ENST00000568108 CHCHD7Q9BUK0 85 aa4.35□□□□□ -1.71
PTPN9-205ENST00000568108 GTSF1LQ9H1H1 148 aa4.35□□□□□ -1.71
PTPN9-205ENST00000568108 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.34□□□□□ -1.71
PTPN9-205ENST00000568108 IGHV1-58A0A0C4DH39 117 aa4.34□□□□□ -1.71
PTPN9-205ENST00000568108 A0A0J9YXV3 536 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms