RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 SMAGPQ0VAQ4 97 aa13.79□□□□□ -0.2
CNEP1R1-209ENST00000567712 FAM19A5Q7Z5A7 132 aaPredicted RBP13.79□□□□□ -0.2
CNEP1R1-209ENST00000567712 MUC2Q02817 5179 aa13.79□□□□□ -0.2
CNEP1R1-209ENST00000567712 PPP1R17O96001 155 aa13.78□□□□□ -0.2
CNEP1R1-209ENST00000567712 EIF5A2Q9GZV4 153 aaKnown RBP13.78□□□□□ -0.2
CNEP1R1-209ENST00000567712 TLX1NBP0CAT3 122 aa13.77□□□□□ -0.21
CNEP1R1-209ENST00000567712 IMMP2LQ96T52 175 aa13.77□□□□□ -0.21
CNEP1R1-209ENST00000567712 PPP1R2P9O14990 202 aa13.76□□□□□ -0.21
CNEP1R1-209ENST00000567712 NDUFA1O15239 70 aa13.76□□□□□ -0.21
CNEP1R1-209ENST00000567712 GAGE2EQ4V326 116 aa13.76□□□□□ -0.21
CNEP1R1-209ENST00000567712 GAGE2DQ9UEU5 116 aa13.76□□□□□ -0.21
CNEP1R1-209ENST00000567712 TRBV24-1A0A075B6N3 115 aa13.75□□□□□ -0.21
CNEP1R1-209ENST00000567712 TMEM18Q96B42 140 aa13.75□□□□□ -0.21
CNEP1R1-209ENST00000567712 C20orf78Q9BR46 151 aa13.75□□□□□ -0.21
CNEP1R1-209ENST00000567712 KIAA0087Q14695 138 aa13.74□□□□□ -0.21
CNEP1R1-209ENST00000567712 SMDT1Q9H4I9 107 aa13.74□□□□□ -0.21
CNEP1R1-209ENST00000567712 NAT8BQ9UHF3 227 aa13.74□□□□□ -0.21
CNEP1R1-209ENST00000567712 F8WDY8 70 aa13.73□□□□□ -0.21
CNEP1R1-209ENST00000567712 TNFRSF6BO95407 300 aa13.73□□□□□ -0.21
CNEP1R1-209ENST00000567712 RPL32P62910 135 aaKnown RBP13.73□□□□□ -0.21
CNEP1R1-209ENST00000567712 IGLV1-50A0A075B6I6 118 aa13.72□□□□□ -0.21
CNEP1R1-209ENST00000567712 RPL23P62829 140 aaKnown RBP13.72□□□□□ -0.21
CNEP1R1-209ENST00000567712 MRPS36P82909 103 aaKnown RBP13.72□□□□□ -0.21
CNEP1R1-209ENST00000567712 FAM74A3Q4VXF1 159 aa13.72□□□□□ -0.21
CNEP1R1-209ENST00000567712 SMIM2Q9BVW6 85 aa13.72□□□□□ -0.21
CNEP1R1-209ENST00000567712 SMIM27A0A1W2PRY6 76 aa13.71□□□□□ -0.21
CNEP1R1-209ENST00000567712 LINC00862A6NCI5 91 aa13.71□□□□□ -0.21
CNEP1R1-209ENST00000567712 TCAPO15273 167 aa13.71□□□□□ -0.21
CNEP1R1-209ENST00000567712 CKS2P33552 79 aa13.71□□□□□ -0.21
CNEP1R1-209ENST00000567712 TMEM241Q24JQ0 296 aa13.71□□□□□ -0.21
CNEP1R1-209ENST00000567712 SPANXA1Q9NS26 97 aa13.71□□□□□ -0.21
CNEP1R1-209ENST00000567712 IFITM10A6NMD0 228 aa13.7□□□□□ -0.22
CNEP1R1-209ENST00000567712 C9JQL5 133 aa13.7□□□□□ -0.22
CNEP1R1-209ENST00000567712 NPYP01303 97 aa13.7□□□□□ -0.22
CNEP1R1-209ENST00000567712 D6R8Y8 96 aa13.69□□□□□ -0.22
CNEP1R1-209ENST00000567712 M0QXV9 152 aa13.69□□□□□ -0.22
CNEP1R1-209ENST00000567712 HBBP68871 147 aa13.69□□□□□ -0.22
CNEP1R1-209ENST00000567712 C9orf129Q5T035 196 aaKnown RBP13.69□□□□□ -0.22
CNEP1R1-209ENST00000567712 C2orf82Q6UX34 121 aa13.69□□□□□ -0.22
CNEP1R1-209ENST00000567712 PRR4Q16378 134 aa13.67□□□□□ -0.22
CNEP1R1-209ENST00000567712 UBE2BP63146 152 aa13.66□□□□□ -0.22
CNEP1R1-209ENST00000567712 ADIRFQ15847 76 aa13.66□□□□□ -0.22
CNEP1R1-209ENST00000567712 LINC00242Q5T6M2 205 aa13.66□□□□□ -0.22
CNEP1R1-209ENST00000567712 SRSF3P84103 164 aaKnown RBP13.64□□□□□ -0.23
CNEP1R1-209ENST00000567712 MRPL54Q6P161 138 aaKnown RBP13.64□□□□□ -0.23
CNEP1R1-209ENST00000567712 TGIF2-C20orf24A0A0A6YYL0 155 aa13.63□□□□□ -0.23
CNEP1R1-209ENST00000567712 UBE2D1P51668 147 aa13.63□□□□□ -0.23
CNEP1R1-209ENST00000567712 IGLV4-3A0A075B6K6 122 aa13.62□□□□□ -0.23
CNEP1R1-209ENST00000567712 TRBV30A0A0K0K1B3 111 aa13.62□□□□□ -0.23
CNEP1R1-209ENST00000567712 A0A1B0GXF2 115 aa13.62□□□□□ -0.23
CNEP1R1-209ENST00000567712 NDUFC2-KCTD14E9PQ53 114 aa13.61□□□□□ -0.23
CNEP1R1-209ENST00000567712 ZC2HC1BQ5TFG8 222 aa13.61□□□□□ -0.23
CNEP1R1-209ENST00000567712 A0A1B0GW15 77 aa13.6□□□□□ -0.23
CNEP1R1-209ENST00000567712 NAT8Q9UHE5 227 aa13.6□□□□□ -0.23
CNEP1R1-209ENST00000567712 PYGO1Q9Y3Y4 419 aa13.59□□□□□ -0.23
CNEP1R1-209ENST00000567712 IFI27P40305 119 aaPredicted RBP13.58□□□□□ -0.24
CNEP1R1-209ENST00000567712 RPL13AP40429 203 aaKnown RBP13.58□□□□□ -0.24
CNEP1R1-209ENST00000567712 ZNF861PO60384 105 aa13.57□□□□□ -0.24
CNEP1R1-209ENST00000567712 LINC00469Q8N7U9 141 aa13.57□□□□□ -0.24
CNEP1R1-209ENST00000567712 TSPAN13O95857 204 aa13.56□□□□□ -0.24
CNEP1R1-209ENST00000567712 LINC00173Q6ZV60 143 aa13.56□□□□□ -0.24
CNEP1R1-209ENST00000567712 TMEM141Q96I45 108 aa13.56□□□□□ -0.24
CNEP1R1-209ENST00000567712 PACRGQ96M98 296 aaPredicted RBP13.56□□□□□ -0.24
CNEP1R1-209ENST00000567712 CARHSP1Q9Y2V2 147 aaKnown RBP13.56□□□□□ -0.24
CNEP1R1-209ENST00000567712 F8W036 122 aa13.55□□□□□ -0.24
CNEP1R1-209ENST00000567712 KRTAP9-2Q9BYQ4 174 aa13.55□□□□□ -0.24
CNEP1R1-209ENST00000567712 PPBPP02775 128 aa13.54□□□□□ -0.24
CNEP1R1-209ENST00000567712 C22orf24Q9Y442 160 aa13.54□□□□□ -0.24
CNEP1R1-209ENST00000567712 RAB5AP20339 215 aa13.53□□□□□ -0.24
CNEP1R1-209ENST00000567712 TMEM136Q6ZRR5 245 aa13.53□□□□□ -0.24
CNEP1R1-209ENST00000567712 ORMDL3Q8N138 153 aa13.53□□□□□ -0.24
CNEP1R1-209ENST00000567712 PRELID3AQ96N28 172 aa13.53□□□□□ -0.24
CNEP1R1-209ENST00000567712 A0A087X002 238 aa13.52□□□□□ -0.25
CNEP1R1-209ENST00000567712 LINC01561Q8N1V8 128 aa13.52□□□□□ -0.25
CNEP1R1-209ENST00000567712 XAGE1AQ9HD64 81 aa13.52□□□□□ -0.25
CNEP1R1-209ENST00000567712 LOC389332A0A1B0GUA5 103 aa13.51□□□□□ -0.25
CNEP1R1-209ENST00000567712 S100A8P05109 93 aa13.51□□□□□ -0.25
CNEP1R1-209ENST00000567712 TEX43Q6ZNM6 134 aa13.51□□□□□ -0.25
CNEP1R1-209ENST00000567712 CTDSP1Q9GZU7 261 aa13.51□□□□□ -0.25
CNEP1R1-209ENST00000567712 TOMM7Q9P0U1 55 aa13.51□□□□□ -0.25
CNEP1R1-209ENST00000567712 AMELXQ99217 191 aa13.5□□□□□ -0.25
CNEP1R1-209ENST00000567712 PRSS47A8MTI9 375 aa13.49□□□□□ -0.25
CNEP1R1-209ENST00000567712 NUPR1O60356 82 aa13.47□□□□□ -0.25
CNEP1R1-209ENST00000567712 LCE2AQ5TA79 106 aaPredicted RBP13.47□□□□□ -0.25
CNEP1R1-209ENST00000567712 Q6ZN92 141 aa13.47□□□□□ -0.25
CNEP1R1-209ENST00000567712 FAT4Q6V0I7 4981 aa13.47□□□□□ -0.25
CNEP1R1-209ENST00000567712 C2orf66Q6UXQ4 117 aa13.46□□□□□ -0.25
CNEP1R1-209ENST00000567712 PRSS2P07478 247 aa13.45□□□□□ -0.26
CNEP1R1-209ENST00000567712 PEA15Q15121 130 aa13.45□□□□□ -0.26
CNEP1R1-209ENST00000567712 C6orf226Q5I0X4 101 aa13.45□□□□□ -0.26
CNEP1R1-209ENST00000567712 Q8IZM0 81 aa13.45□□□□□ -0.26
CNEP1R1-209ENST00000567712 C2orf88Q9BSF0 95 aa13.45□□□□□ -0.26
CNEP1R1-209ENST00000567712 ANAPC11Q9NYG5 84 aa13.45□□□□□ -0.26
CNEP1R1-209ENST00000567712 IGIPA6NJ69 53 aa13.44□□□□□ -0.26
CNEP1R1-209ENST00000567712 CKS1BP61024 79 aa13.44□□□□□ -0.26
CNEP1R1-209ENST00000567712 FAM19A3Q7Z5A8 133 aa13.44□□□□□ -0.26
CNEP1R1-209ENST00000567712 CYSLTR1Q9Y271 337 aa13.44□□□□□ -0.26
CNEP1R1-209ENST00000567712 ATP5L2Q7Z4Y8 100 aa13.43□□□□□ -0.26
CNEP1R1-209ENST00000567712 Q8N8P6 123 aa13.43□□□□□ -0.26
CNEP1R1-209ENST00000567712 ALKBH7Q9BT30 221 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms