RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 AMTP48728 403 aa4.52□□□□□ -1.69
SF3B3-209ENST00000567635 REG3AQ06141 175 aa4.52□□□□□ -1.69
SF3B3-209ENST00000567635 LINC01620Q4KN68 170 aa4.52□□□□□ -1.69
SF3B3-209ENST00000567635 TMEM136Q6ZRR5 245 aa4.52□□□□□ -1.69
SF3B3-209ENST00000567635 DEFB104AQ8WTQ1 72 aa4.52□□□□□ -1.69
SF3B3-209ENST00000567635 SIGMAR1Q99720 223 aa4.52□□□□□ -1.69
SF3B3-209ENST00000567635 LRP1BQ9NZR2 4599 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 DMBT1Q9UGM3 2413 aaPredicted RBP4.51□□□□□ -1.69
SF3B3-209ENST00000567635 IGLV4-60A0A075B6I1 120 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 TRAV8-4A0A0B4J246 113 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 TRAV26-2A0A0B4J265 109 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 A0A1B0GUT8 65 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 A0A1B0GW15 77 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 GAGE10A6NGK3 116 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 UBE2L6O14933 153 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 NUPR1O60356 82 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 APCSP02743 223 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 AMMECR1LQ6DCA0 310 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 DGAT2L7PQ6IED9 249 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 CLPSL2Q6UWE3 100 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 C20orf203Q8NBC4 194 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 OR5A1Q8NGJ0 315 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 PMCHL2Q9BQD1 86 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 ST20Q9HBF5 79 aa4.51□□□□□ -1.69
SF3B3-209ENST00000567635 NCR2O95944 276 aa4.5□□□□□ -1.69
SF3B3-209ENST00000567635 PLA2G1BP04054 148 aaKnown RBP4.5□□□□□ -1.69
SF3B3-209ENST00000567635 PRSS1P07477 247 aa4.5□□□□□ -1.69
SF3B3-209ENST00000567635 PMCHP20382 165 aa4.5□□□□□ -1.69
SF3B3-209ENST00000567635 CAMPP49913 170 aa4.5□□□□□ -1.69
SF3B3-209ENST00000567635 SEC11AP67812 179 aa4.5□□□□□ -1.69
SF3B3-209ENST00000567635 HBBP68871 147 aa4.5□□□□□ -1.69
SF3B3-209ENST00000567635 Q6ZVH6 145 aa4.5□□□□□ -1.69
SF3B3-209ENST00000567635 RPL39LQ96EH5 51 aaKnown RBP4.5□□□□□ -1.69
SF3B3-209ENST00000567635 CHAC1Q9BUX1 264 aa4.5□□□□□ -1.69
SF3B3-209ENST00000567635 IGLV10-54A0A075B6I4 117 aa4.49□□□□□ -1.69
SF3B3-209ENST00000567635 TRBV6-5A0A0K0K1A5 114 aa4.49□□□□□ -1.69
SF3B3-209ENST00000567635 A6NDN8 102 aa4.49□□□□□ -1.69
SF3B3-209ENST00000567635 H7C423 109 aa4.49□□□□□ -1.69
SF3B3-209ENST00000567635 C3orf79P0CE67 100 aa4.49□□□□□ -1.69
SF3B3-209ENST00000567635 LINC00310P59036 64 aa4.49□□□□□ -1.69
SF3B3-209ENST00000567635 CKS1BP61024 79 aa4.49□□□□□ -1.69
SF3B3-209ENST00000567635 BVES-AS1Q5T3Y7 98 aa4.49□□□□□ -1.69
SF3B3-209ENST00000567635 FA2HQ7L5A8 372 aa4.49□□□□□ -1.69
SF3B3-209ENST00000567635 TMEM191AQ9H0A3 160 aa4.49□□□□□ -1.69
SF3B3-209ENST00000567635 ABCA13Q86UQ4 5058 aa4.48□□□□□ -1.69
SF3B3-209ENST00000567635 SDHAF1A6NFY7 115 aa4.48□□□□□ -1.69
SF3B3-209ENST00000567635 I3L3M4 83 aa4.48□□□□□ -1.69
SF3B3-209ENST00000567635 K7EP34 96 aa4.48□□□□□ -1.69
SF3B3-209ENST00000567635 KIAA1644Q3SXP7 199 aa4.48□□□□□ -1.69
SF3B3-209ENST00000567635 SLC25A34Q6PIV7 304 aa4.48□□□□□ -1.69
SF3B3-209ENST00000567635 SCXQ7RTU7 201 aa4.48□□□□□ -1.69
SF3B3-209ENST00000567635 C9orf163Q8N9P6 203 aa4.48□□□□□ -1.69
SF3B3-209ENST00000567635 MRAP2Q96G30 205 aa4.48□□□□□ -1.69
SF3B3-209ENST00000567635 APOBP04114 4563 aaKnown RBP4.48□□□□□ -1.69
SF3B3-209ENST00000567635 DNAH5Q8TE73 4624 aa4.47□□□□□ -1.69
SF3B3-209ENST00000567635 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-209ENST00000567635 hDV102S1A0JD36 115 aa4.47□□□□□ -1.69
SF3B3-209ENST00000567635 IGKV2-29A2NJV5 120 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-209ENST00000567635 H3BRM9 83 aa4.47□□□□□ -1.69
SF3B3-209ENST00000567635 GAS8-AS1O95177 125 aa4.47□□□□□ -1.69
SF3B3-209ENST00000567635 FGF6P10767 208 aa4.47□□□□□ -1.69
SF3B3-209ENST00000567635 HSD52Q0P140 79 aa4.47□□□□□ -1.69
SF3B3-209ENST00000567635 FAM104BQ5XKR9 115 aa4.47□□□□□ -1.69
SF3B3-209ENST00000567635 RNASEKQ6P5S7 137 aaKnown RBP4.47□□□□□ -1.69
SF3B3-209ENST00000567635 SDIM1Q6ZPB5 146 aa4.47□□□□□ -1.69
SF3B3-209ENST00000567635 CIRBP-AS1Q8TBR5 109 aa4.47□□□□□ -1.69
SF3B3-209ENST00000567635 RNF185Q96GF1 192 aa4.47□□□□□ -1.69
SF3B3-209ENST00000567635 IGKV3OR2-268A0A0C4DH90 116 aa4.46□□□□□ -1.7
SF3B3-209ENST00000567635 GAGE12HA6NDE8 117 aa4.46□□□□□ -1.7
SF3B3-209ENST00000567635 C9orf118A6NHY6 69 aa4.46□□□□□ -1.7
SF3B3-209ENST00000567635 VCYO14598 125 aa4.46□□□□□ -1.7
SF3B3-209ENST00000567635 HSBP1O75506 76 aa4.46□□□□□ -1.7
SF3B3-209ENST00000567635 PPP1R17O96001 155 aa4.46□□□□□ -1.7
SF3B3-209ENST00000567635 TSHBP01222 138 aa4.46□□□□□ -1.7
SF3B3-209ENST00000567635 POLR2KP53803 58 aaKnown RBP4.46□□□□□ -1.7
SF3B3-209ENST00000567635 CNBPP62633 177 aaKnown RBP4.46□□□□□ -1.7
SF3B3-209ENST00000567635 AMN1Q8IY45 258 aa4.46□□□□□ -1.7
SF3B3-209ENST00000567635 TMEM101Q96IK0 257 aa4.46□□□□□ -1.7
SF3B3-209ENST00000567635 AP5S1Q9NUS5 200 aa4.46□□□□□ -1.7
SF3B3-209ENST00000567635 IGHV3-64A0A075B6Q5 118 aa4.45□□□□□ -1.7
SF3B3-209ENST00000567635 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.45□□□□□ -1.7
SF3B3-209ENST00000567635 TRBV27A0A0K0K1C4 114 aa4.45□□□□□ -1.7
SF3B3-209ENST00000567635 SMAGPQ0VAQ4 97 aa4.45□□□□□ -1.7
SF3B3-209ENST00000567635 MRPL51Q4U2R6 128 aaKnown RBP4.45□□□□□ -1.7
SF3B3-209ENST00000567635 C18orf32Q8TCD1 76 aa4.45□□□□□ -1.7
SF3B3-209ENST00000567635 CHCHD10Q8WYQ3 142 aaPredicted RBP4.45□□□□□ -1.7
SF3B3-209ENST00000567635 DPH3Q96FX2 82 aa4.45□□□□□ -1.7
SF3B3-209ENST00000567635 GEMIN7Q9H840 131 aaKnown RBP4.45□□□□□ -1.7
SF3B3-209ENST00000567635 VPS13BQ7Z7G8 4022 aa4.44□□□□□ -1.7
SF3B3-209ENST00000567635 SMKR1H3BMG3 65 aa4.44□□□□□ -1.7
SF3B3-209ENST00000567635 TSPAN13O95857 204 aa4.44□□□□□ -1.7
SF3B3-209ENST00000567635 SLPIP03973 132 aa4.44□□□□□ -1.7
SF3B3-209ENST00000567635 FCER1GP30273 86 aa4.44□□□□□ -1.7
SF3B3-209ENST00000567635 SPANXA1Q9NS26 97 aa4.44□□□□□ -1.7
SF3B3-209ENST00000567635 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
SF3B3-209ENST00000567635 LINC00959A0A1B0GUT2 108 aa4.43□□□□□ -1.7
SF3B3-209ENST00000567635 FABP2P12104 132 aa4.43□□□□□ -1.7
SF3B3-209ENST00000567635 CKS2P33552 79 aa4.43□□□□□ -1.7
SF3B3-209ENST00000567635 SUMO2P61956 95 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms