RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 NDUFA1O15239 70 aa9.24□□□□□ -0.93
PALB2-205ENST00000567003 TAGLN2P37802 199 aaKnown RBP9.24□□□□□ -0.93
PALB2-205ENST00000567003 SUMO2P61956 95 aaKnown RBP9.24□□□□□ -0.93
PALB2-205ENST00000567003 RPL39P62891 51 aaKnown RBP9.24□□□□□ -0.93
PALB2-205ENST00000567003 UBE2BP63146 152 aa9.24□□□□□ -0.93
PALB2-205ENST00000567003 TSKUQ8WUA8 353 aa9.24□□□□□ -0.93
PALB2-205ENST00000567003 FAM104AQ969W3 186 aa9.24□□□□□ -0.93
PALB2-205ENST00000567003 IMMP2LQ96T52 175 aa9.24□□□□□ -0.93
PALB2-205ENST00000567003 A0A0U1RQV1 116 aa9.23□□□□□ -0.93
PALB2-205ENST00000567003 M0QXV9 152 aa9.23□□□□□ -0.93
PALB2-205ENST00000567003 TSPAN13O95857 204 aa9.22□□□□□ -0.93
PALB2-205ENST00000567003 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
PALB2-205ENST00000567003 SMAGPQ0VAQ4 97 aa9.22□□□□□ -0.93
PALB2-205ENST00000567003 KIR2DL4Q99706 377 aa9.22□□□□□ -0.93
PALB2-205ENST00000567003 SMDT1Q9H4I9 107 aa9.22□□□□□ -0.93
PALB2-205ENST00000567003 IGHV3OR16-9A0A0B4J2B5 98 aa9.21□□□□□ -0.94
PALB2-205ENST00000567003 TMEM250H0YL14 139 aa9.21□□□□□ -0.94
PALB2-205ENST00000567003 TIMM21Q9BVV7 248 aa9.21□□□□□ -0.94
PALB2-205ENST00000567003 RPL13AP40429 203 aaKnown RBP9.2□□□□□ -0.94
PALB2-205ENST00000567003 ANKRD39Q53RE8 183 aa9.2□□□□□ -0.94
PALB2-205ENST00000567003 SLC51BQ86UW2 128 aa9.2□□□□□ -0.94
PALB2-205ENST00000567003 MRPL51Q4U2R6 128 aaKnown RBP9.19□□□□□ -0.94
PALB2-205ENST00000567003 LINC01551Q86U37 167 aa9.19□□□□□ -0.94
PALB2-205ENST00000567003 IFITM10A6NMD0 228 aa9.18□□□□□ -0.94
PALB2-205ENST00000567003 F8WDY8 70 aa9.18□□□□□ -0.94
PALB2-205ENST00000567003 RIGQ13278 110 aa9.18□□□□□ -0.94
PALB2-205ENST00000567003 C9orf129Q5T035 196 aaKnown RBP9.18□□□□□ -0.94
PALB2-205ENST00000567003 TMEM18Q96B42 140 aa9.18□□□□□ -0.94
PALB2-205ENST00000567003 SMIM7Q9BQ49 75 aa9.18□□□□□ -0.94
PALB2-205ENST00000567003 KRTAP9-6A0A140TA67 174 aa9.17□□□□□ -0.94
PALB2-205ENST00000567003 PPP1R2P9O14990 202 aa9.17□□□□□ -0.94
PALB2-205ENST00000567003 KIAA0087Q14695 138 aa9.17□□□□□ -0.94
PALB2-205ENST00000567003 TMEM241Q24JQ0 296 aa9.17□□□□□ -0.94
PALB2-205ENST00000567003 C2orf82Q6UX34 121 aa9.17□□□□□ -0.94
PALB2-205ENST00000567003 OSTCQ9NRP0 149 aa9.17□□□□□ -0.94
PALB2-205ENST00000567003 PPP1R17O96001 155 aa9.16□□□□□ -0.94
PALB2-205ENST00000567003 CARHSP1Q9Y2V2 147 aaKnown RBP9.16□□□□□ -0.94
PALB2-205ENST00000567003 V9GYV3 84 aa9.16□□□□□ -0.94
PALB2-205ENST00000567003 HBBP68871 147 aa9.15□□□□□ -0.94
PALB2-205ENST00000567003 FAM104BQ5XKR9 115 aa9.15□□□□□ -0.94
PALB2-205ENST00000567003 SPANXA1Q9NS26 97 aa9.15□□□□□ -0.94
PALB2-205ENST00000567003 A0A087X002 238 aa9.14□□□□□ -0.95
PALB2-205ENST00000567003 TCAPO15273 167 aa9.14□□□□□ -0.95
PALB2-205ENST00000567003 ZNF861PO60384 105 aa9.14□□□□□ -0.95
PALB2-205ENST00000567003 ALKAL2Q6UX46 152 aa9.14□□□□□ -0.95
PALB2-205ENST00000567003 TGIF2-C20orf24A0A0A6YYL0 155 aa9.13□□□□□ -0.95
PALB2-205ENST00000567003 NDUFC2-KCTD14E9PQ53 114 aa9.13□□□□□ -0.95
PALB2-205ENST00000567003 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
PALB2-205ENST00000567003 C20orf78Q9BR46 151 aa9.13□□□□□ -0.95
PALB2-205ENST00000567003 SMIM2Q9BVW6 85 aa9.13□□□□□ -0.95
PALB2-205ENST00000567003 ZNF727A8MUV8 499 aa9.12□□□□□ -0.95
PALB2-205ENST00000567003 TNFRSF6BO95407 300 aa9.12□□□□□ -0.95
PALB2-205ENST00000567003 CKS2P33552 79 aa9.12□□□□□ -0.95
PALB2-205ENST00000567003 LINC00469Q8N7U9 141 aa9.12□□□□□ -0.95
PALB2-205ENST00000567003 TRBV24-1A0A075B6N3 115 aa9.11□□□□□ -0.95
PALB2-205ENST00000567003 TRBV30A0A0K0K1B3 111 aa9.11□□□□□ -0.95
PALB2-205ENST00000567003 H3BS24 57 aa9.11□□□□□ -0.95
PALB2-205ENST00000567003 RPL32P62910 135 aaKnown RBP9.11□□□□□ -0.95
PALB2-205ENST00000567003 BLOC1S1P78537 153 aa9.11□□□□□ -0.95
PALB2-205ENST00000567003 LINC00242Q5T6M2 205 aa9.11□□□□□ -0.95
PALB2-205ENST00000567003 TCTE3Q8IZS6 198 aa9.11□□□□□ -0.95
PALB2-205ENST00000567003 EIF5A2Q9GZV4 153 aaKnown RBP9.11□□□□□ -0.95
PALB2-205ENST00000567003 D6R8Y8 96 aa9.1□□□□□ -0.95
PALB2-205ENST00000567003 NPYP01303 97 aa9.1□□□□□ -0.95
PALB2-205ENST00000567003 PACRGQ96M98 296 aaPredicted RBP9.1□□□□□ -0.95
PALB2-205ENST00000567003 RETNLBQ9BQ08 111 aa9.1□□□□□ -0.95
PALB2-205ENST00000567003 CTDSP1Q9GZU7 261 aa9.1□□□□□ -0.95
PALB2-205ENST00000567003 NAT8BQ9UHF3 227 aa9.1□□□□□ -0.95
PALB2-205ENST00000567003 C22orf24Q9Y442 160 aa9.1□□□□□ -0.95
PALB2-205ENST00000567003 SRP19P09132 144 aaKnown RBP9.09□□□□□ -0.95
PALB2-205ENST00000567003 FAM74A3Q4VXF1 159 aa9.09□□□□□ -0.95
PALB2-205ENST00000567003 ZC2HC1BQ5TFG8 222 aa9.09□□□□□ -0.95
PALB2-205ENST00000567003 ANAPC11Q9NYG5 84 aa9.09□□□□□ -0.95
PALB2-205ENST00000567003 IGLV4-3A0A075B6K6 122 aa9.08□□□□□ -0.96
PALB2-205ENST00000567003 LINC00862A6NCI5 91 aa9.08□□□□□ -0.96
PALB2-205ENST00000567003 XAGE1AQ9HD64 81 aa9.08□□□□□ -0.96
PALB2-205ENST00000567003 NUPR1O60356 82 aa9.07□□□□□ -0.96
PALB2-205ENST00000567003 TYMSOSQ8TAI1 123 aa9.07□□□□□ -0.96
PALB2-205ENST00000567003 IFI27P40305 119 aaPredicted RBP9.06□□□□□ -0.96
PALB2-205ENST00000567003 RPL23P62829 140 aaKnown RBP9.06□□□□□ -0.96
PALB2-205ENST00000567003 MRPL54Q6P161 138 aaKnown RBP9.06□□□□□ -0.96
PALB2-205ENST00000567003 TOMM7Q9P0U1 55 aa9.06□□□□□ -0.96
PALB2-205ENST00000567003 SMIM27A0A1W2PRY6 76 aa9.05□□□□□ -0.96
PALB2-205ENST00000567003 ADIRFQ15847 76 aa9.05□□□□□ -0.96
PALB2-205ENST00000567003 CRYGAP11844 174 aa9.04□□□□□ -0.96
PALB2-205ENST00000567003 TMEM141Q96I45 108 aa9.04□□□□□ -0.96
PALB2-205ENST00000567003 BCE1O60756 84 aa9.03□□□□□ -0.96
PALB2-205ENST00000567003 KRTAP13-2Q52LG2 175 aa9.03□□□□□ -0.96
PALB2-205ENST00000567003 LBHQ53QV2 105 aaPredicted RBP9.03□□□□□ -0.96
PALB2-205ENST00000567003 PRSS2P07478 247 aa9.02□□□□□ -0.97
PALB2-205ENST00000567003 RPL28P46779 137 aaKnown RBP9.02□□□□□ -0.97
PALB2-205ENST00000567003 CKS1BP61024 79 aa9.02□□□□□ -0.97
PALB2-205ENST00000567003 TEX43Q6ZNM6 134 aa9.02□□□□□ -0.97
PALB2-205ENST00000567003 LINC00173Q6ZV60 143 aa9.02□□□□□ -0.97
PALB2-205ENST00000567003 PYGO1Q9Y3Y4 419 aa9.02□□□□□ -0.97
PALB2-205ENST00000567003 A0A1B0GW15 77 aa9.01□□□□□ -0.97
PALB2-205ENST00000567003 A0A1B0GXF2 115 aa9.01□□□□□ -0.97
PALB2-205ENST00000567003 RPL37AP8A6NKH3 93 aa9.01□□□□□ -0.97
PALB2-205ENST00000567003 C9JQL5 133 aa9.01□□□□□ -0.97
PALB2-205ENST00000567003 RAB5AP20339 215 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms