RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 DEFB131BA0A096LNP1 70 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 TRAV3A0A0B4J244 114 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 IGLC7A0M8Q6 106 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 C7orf71A4D174 169 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 ZNF705FA8MVS1 300 aaPredicted RBP2.85□□□□□ -1.95
KARS-208ENST00000566772 NDUFA4O00483 81 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 IFNA17P01571 189 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 PMP2P02689 132 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 P0DMU3 169 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 FAM231AP0DMU4 169 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 FAM231CP0DMU5 169 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 HTN3P15516 51 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 S100A11P31949 105 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 FUSP35637 526 aaKnown RBP eCLIP2.85□□□□□ -1.95
KARS-208ENST00000566772 TMBIM6P55061 237 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 FXYD4P59646 89 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 DEFB131AP59861 70 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 PRR15Q8IV56 129 aa2.85□□□□□ -1.95
KARS-208ENST00000566772 TRAV14DV4A0A0A6YYC5 116 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 IBA57-AS1B1ANH7 110 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 GABARAPH6UMI1 98 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 PDCD5O14737 125 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 GNG7O60262 68 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 SNAPC5O75971 98 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 TRAPPC2P0DI81 140 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 TRAPPC2BP0DI82 140 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 BCL2P10415 239 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 GNG2P59768 71 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 CATR1Q13166 79 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 LSM10Q969L4 123 aaKnown RBP2.84□□□□□ -1.95
KARS-208ENST00000566772 SLC25A21Q9BQT8 299 aaPredicted RBP2.84□□□□□ -1.95
KARS-208ENST00000566772 NPCDR1Q9BY65 106 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 SCN3BQ9NY72 215 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 BET1LQ9NYM9 111 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 LAMTOR2Q9Y2Q5 125 aa2.84□□□□□ -1.95
KARS-208ENST00000566772 MUC4Q99102 2169 aa2.84□□□□□ -1.96
KARS-208ENST00000566772 TRGV4A0A0C4DH28 118 aa2.83□□□□□ -1.96
KARS-208ENST00000566772 IFITM5A6NNB3 132 aa2.83□□□□□ -1.96
KARS-208ENST00000566772 K7ERJ3 54 aa2.83□□□□□ -1.96
KARS-208ENST00000566772 OR10J4P0C629 311 aa2.83□□□□□ -1.96
KARS-208ENST00000566772 MIFP14174 115 aa2.83□□□□□ -1.96
KARS-208ENST00000566772 S100A12P80511 92 aa2.83□□□□□ -1.96
KARS-208ENST00000566772 WT1-ASQ06250 92 aa2.83□□□□□ -1.96
KARS-208ENST00000566772 TMEM14BQ9NUH8 114 aa2.83□□□□□ -1.96
KARS-208ENST00000566772 DMBT1Q9UGM3 2413 aaPredicted RBP2.82□□□□□ -1.96
KARS-208ENST00000566772 J3KT08 172 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 K7EIM0 57 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 PPYP01298 95 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 SPINK9Q5DT21 86 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 PSMG4Q5JS54 123 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 C1orf134Q5TEV5 83 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 TMEM91Q6ZNR0 172 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 C9orf163Q8N9P6 203 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 SPACA4Q8TDM5 124 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 GSKIPQ9P0R6 139 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 LSM2Q9Y333 95 aaKnown RBP2.82□□□□□ -1.96
KARS-208ENST00000566772 TPRKBQ9Y3C4 175 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 PKD1P98161 4303 aa2.82□□□□□ -1.96
KARS-208ENST00000566772 DNAH6Q9C0G6 4158 aa2.81□□□□□ -1.96
KARS-208ENST00000566772 A0A087WX48 190 aa2.81□□□□□ -1.96
KARS-208ENST00000566772 TRAV1-1A0A0B4J248 108 aa2.81□□□□□ -1.96
KARS-208ENST00000566772 TIMM17BO60830 172 aa2.81□□□□□ -1.96
KARS-208ENST00000566772 IGKV4-1P06312 121 aa2.81□□□□□ -1.96
KARS-208ENST00000566772 SNCAP37840 140 aa2.81□□□□□ -1.96
KARS-208ENST00000566772 EIF5AL1Q6IS14 154 aaKnown RBP2.81□□□□□ -1.96
KARS-208ENST00000566772 ZNF818PQ6ZRF7 136 aa2.81□□□□□ -1.96
KARS-208ENST00000566772 BORCS5Q969J3 196 aa2.81□□□□□ -1.96
KARS-208ENST00000566772 FKBP11Q9NYL4 201 aa2.81□□□□□ -1.96
KARS-208ENST00000566772 NAT8BQ9UHF3 227 aa2.81□□□□□ -1.96
KARS-208ENST00000566772 VPS13DQ5THJ4 4388 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 TRAV1-2A0A0B4J238 106 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 H3BRN7 92 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 I3L2K1 104 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 CST7O76096 145 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 SPART-AS1P0CW21 52 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 MGST1P10620 155 aaKnown RBP2.8□□□□□ -1.96
KARS-208ENST00000566772 SNRPD3P62318 126 aaKnown RBP2.8□□□□□ -1.96
KARS-208ENST00000566772 SMCO1Q147U7 214 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 KLK9Q2XQG4 91 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 C7orf65Q6ZTY9 151 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 RNASE11Q8TAA1 199 aaKnown RBP2.8□□□□□ -1.96
KARS-208ENST00000566772 TSC22D3Q99576 134 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 PDCD10Q9BUL8 212 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 NDUFA4L2Q9NRX3 87 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 NHP2Q9NX24 153 aaKnown RBP2.8□□□□□ -1.96
KARS-208ENST00000566772 KLK9Q9UKQ9 250 aa2.8□□□□□ -1.96
KARS-208ENST00000566772 SRRM2Q9UQ35 2752 aaKnown RBP2.8□□□□□ -1.96
KARS-208ENST00000566772 TRAV2A0A0B4J234 112 aa2.79□□□□□ -1.96
KARS-208ENST00000566772 TMEM189A5PLL7 270 aa2.79□□□□□ -1.96
KARS-208ENST00000566772 HBBP68871 147 aa2.79□□□□□ -1.96
KARS-208ENST00000566772 PRCDQ00LT1 54 aa2.79□□□□□ -1.96
KARS-208ENST00000566772 ESRGQ1W209 222 aa2.79□□□□□ -1.96
KARS-208ENST00000566772 PATE2Q6UY27 113 aa2.79□□□□□ -1.96
KARS-208ENST00000566772 OR4B1Q8NGF8 309 aa2.79□□□□□ -1.96
KARS-208ENST00000566772 LINC00052Q96N35 136 aa2.79□□□□□ -1.96
KARS-208ENST00000566772 SLC50A1Q9BRV3 221 aa2.79□□□□□ -1.96
KARS-208ENST00000566772 SPANXA1Q9NS26 97 aa2.79□□□□□ -1.96
KARS-208ENST00000566772 FAT2Q9NYQ8 4349 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms