RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 IGHV3OR16-9A0A0B4J2B5 98 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 H3BS24 57 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 CCL25O15444 150 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 CRPP02741 224 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 NDUFA6P56556 154 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 C15orf56Q8N910 161 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 NTN5Q8WTR8 489 aaPredicted RBP6.06□□□□□ -1.44
SMPD3-207ENST00000566466 CST9LQ9H4G1 147 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 GAGE12HA6NDE8 117 aa6.05□□□□□ -1.44
SMPD3-207ENST00000566466 DGAT2L7PQ6IED9 249 aa6.05□□□□□ -1.44
SMPD3-207ENST00000566466 TEX43Q6ZNM6 134 aa6.05□□□□□ -1.44
SMPD3-207ENST00000566466 NFE4Q86UQ8 179 aa6.05□□□□□ -1.44
SMPD3-207ENST00000566466 HIST3H2BBQ8N257 126 aa6.05□□□□□ -1.44
SMPD3-207ENST00000566466 C1orf43Q9BWL3 253 aa6.05□□□□□ -1.44
SMPD3-207ENST00000566466 BIRC6Q9NR09 4857 aa6.04□□□□□ -1.44
SMPD3-207ENST00000566466 IGLV5-45A0A087WSX0 123 aa6.04□□□□□ -1.44
SMPD3-207ENST00000566466 A0A0J9YXV3 536 aa6.04□□□□□ -1.44
SMPD3-207ENST00000566466 C5orf52A6NGY3 159 aa6.04□□□□□ -1.44
SMPD3-207ENST00000566466 LINC01549A6NIU2 74 aa6.04□□□□□ -1.44
SMPD3-207ENST00000566466 LECT2O14960 151 aa6.04□□□□□ -1.44
SMPD3-207ENST00000566466 FUSP35637 526 aaKnown RBP eCLIP6.04□□□□□ -1.44
SMPD3-207ENST00000566466 XCL1P47992 114 aa6.04□□□□□ -1.44
SMPD3-207ENST00000566466 KRTAP10-2P60368 255 aa6.04□□□□□ -1.44
SMPD3-207ENST00000566466 SMAGPQ0VAQ4 97 aa6.04□□□□□ -1.44
SMPD3-207ENST00000566466 CD164L2Q6UWJ8 174 aa6.04□□□□□ -1.44
SMPD3-207ENST00000566466 USP17L23D6RBM5 183 aa6.03□□□□□ -1.44
SMPD3-207ENST00000566466 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.03□□□□□ -1.44
SMPD3-207ENST00000566466 SLPIP03973 132 aa6.03□□□□□ -1.44
SMPD3-207ENST00000566466 IGLC3P0DOY3 106 aa6.03□□□□□ -1.44
SMPD3-207ENST00000566466 G0S2P27469 103 aa6.03□□□□□ -1.44
SMPD3-207ENST00000566466 ODF1Q14990 250 aa6.03□□□□□ -1.44
SMPD3-207ENST00000566466 PMVKQ15126 192 aa6.03□□□□□ -1.44
SMPD3-207ENST00000566466 IFI27L1Q96BM0 104 aa6.03□□□□□ -1.44
SMPD3-207ENST00000566466 PACRGQ96M98 296 aaPredicted RBP6.03□□□□□ -1.44
SMPD3-207ENST00000566466 VCX2Q9H322 139 aa6.03□□□□□ -1.44
SMPD3-207ENST00000566466 TRAV12-1A0A0B4J245 112 aa6.02□□□□□ -1.45
SMPD3-207ENST00000566466 C11orf86A6NJI1 115 aa6.02□□□□□ -1.45
SMPD3-207ENST00000566466 ATP5LO75964 103 aa6.02□□□□□ -1.45
SMPD3-207ENST00000566466 LEPROTL1O95214 131 aa6.02□□□□□ -1.45
SMPD3-207ENST00000566466 PRSS1P07477 247 aa6.02□□□□□ -1.45
SMPD3-207ENST00000566466 FABP4P15090 132 aa6.02□□□□□ -1.45
SMPD3-207ENST00000566466 LINC00336Q6ZUF6 198 aa6.02□□□□□ -1.45
SMPD3-207ENST00000566466 HIST1H2BLQ99880 126 aa6.02□□□□□ -1.45
SMPD3-207ENST00000566466 TM2D2Q9BX73 214 aa6.02□□□□□ -1.45
SMPD3-207ENST00000566466 A0A087WZ39 114 aa6.01□□□□□ -1.45
SMPD3-207ENST00000566466 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
SMPD3-207ENST00000566466 ZNF22P17026 224 aaPredicted RBP6.01□□□□□ -1.45
SMPD3-207ENST00000566466 SS18Q15532 418 aa6.01□□□□□ -1.45
SMPD3-207ENST00000566466 Q6ZN92 141 aa6.01□□□□□ -1.45
SMPD3-207ENST00000566466 C5orf38Q86SI9 138 aa6.01□□□□□ -1.45
SMPD3-207ENST00000566466 Q8N814 137 aa6.01□□□□□ -1.45
SMPD3-207ENST00000566466 RMI2Q96E14 147 aa6.01□□□□□ -1.45
SMPD3-207ENST00000566466 MRPL35Q9NZE8 188 aaKnown RBP6.01□□□□□ -1.45
SMPD3-207ENST00000566466 CDKN2A-AS1Q9UH64 79 aa6.01□□□□□ -1.45
SMPD3-207ENST00000566466 COX11Q9Y6N1 276 aa6.01□□□□□ -1.45
SMPD3-207ENST00000566466 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
SMPD3-207ENST00000566466 GVQW2A0A096LPI5 108 aaPredicted RBP6□□□□□ -1.45
SMPD3-207ENST00000566466 C3orf79P0CE67 100 aa6□□□□□ -1.45
SMPD3-207ENST00000566466 SNRPEP62304 92 aaKnown RBP6□□□□□ -1.45
SMPD3-207ENST00000566466 KIAA0087Q14695 138 aa6□□□□□ -1.45
SMPD3-207ENST00000566466 PAPPA-AS1Q5QFB9 102 aa6□□□□□ -1.45
SMPD3-207ENST00000566466 SMIM1B2RUZ4 78 aa5.99□□□□□ -1.45
SMPD3-207ENST00000566466 F8VRH5 84 aa5.99□□□□□ -1.45
SMPD3-207ENST00000566466 SYS1-DBNDD2H3BUS1 97 aa5.99□□□□□ -1.45
SMPD3-207ENST00000566466 PSCAO43653 123 aa5.99□□□□□ -1.45
SMPD3-207ENST00000566466 C21orf62-AS1Q17RA5 79 aa5.99□□□□□ -1.45
SMPD3-207ENST00000566466 LINC00526Q96FQ7 95 aa5.99□□□□□ -1.45
SMPD3-207ENST00000566466 PMCHL2Q9BQD1 86 aa5.99□□□□□ -1.45
SMPD3-207ENST00000566466 C2orf88Q9BSF0 95 aa5.99□□□□□ -1.45
SMPD3-207ENST00000566466 CHAC1Q9BUX1 264 aa5.99□□□□□ -1.45
SMPD3-207ENST00000566466 RYR1P21817 5038 aa5.99□□□□□ -1.45
SMPD3-207ENST00000566466 IGHV3-64A0A075B6Q5 118 aa5.98□□□□□ -1.45
SMPD3-207ENST00000566466 IGLV5-39A0A0G2JS06 123 aa5.98□□□□□ -1.45
SMPD3-207ENST00000566466 COX7A2LO14548 114 aa5.98□□□□□ -1.45
SMPD3-207ENST00000566466 HERVK_113P63121 156 aa5.98□□□□□ -1.45
SMPD3-207ENST00000566466 HIGD2BQ4VC39 106 aa5.98□□□□□ -1.45
SMPD3-207ENST00000566466 LINC01545Q5VT33 79 aa5.98□□□□□ -1.45
SMPD3-207ENST00000566466 LINC01561Q8N1V8 128 aa5.98□□□□□ -1.45
SMPD3-207ENST00000566466 HSPB8Q9UJY1 196 aa5.98□□□□□ -1.45
SMPD3-207ENST00000566466 CHTOPQ9Y3Y2 248 aaKnown RBP5.98□□□□□ -1.45
SMPD3-207ENST00000566466 IGHV1-58A0A0C4DH39 117 aa5.97□□□□□ -1.45
SMPD3-207ENST00000566466 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.96□□□□□ -1.46
SMPD3-207ENST00000566466 H0Y8G0 127 aa5.96□□□□□ -1.46
SMPD3-207ENST00000566466 SPINK8P0C7L1 97 aa5.96□□□□□ -1.46
SMPD3-207ENST00000566466 CNBPP62633 177 aaKnown RBP5.96□□□□□ -1.46
SMPD3-207ENST00000566466 LINC01620Q4KN68 170 aa5.96□□□□□ -1.46
SMPD3-207ENST00000566466 C10orf25Q5T742 122 aa5.96□□□□□ -1.46
SMPD3-207ENST00000566466 LINC00469Q8N7U9 141 aa5.96□□□□□ -1.46
SMPD3-207ENST00000566466 TMEM223A0PJW6 202 aa5.95□□□□□ -1.46
SMPD3-207ENST00000566466 TSPEAR-AS2P59090 65 aa5.95□□□□□ -1.46
SMPD3-207ENST00000566466 SPAG11BQ08648 103 aa5.95□□□□□ -1.46
SMPD3-207ENST00000566466 PET117Q6UWS5 81 aa5.95□□□□□ -1.46
SMPD3-207ENST00000566466 OR10D4PQ8NGN7 298 aa5.95□□□□□ -1.46
SMPD3-207ENST00000566466 ORAOV1Q8WV07 137 aa5.95□□□□□ -1.46
SMPD3-207ENST00000566466 MAP1LC3CQ9BXW4 147 aa5.95□□□□□ -1.46
SMPD3-207ENST00000566466 KIAA1109Q2LD37 5005 aa5.94□□□□□ -1.46
SMPD3-207ENST00000566466 HSPG2P98160 4391 aa5.94□□□□□ -1.46
SMPD3-207ENST00000566466 hDV102S1A0JD36 115 aa5.94□□□□□ -1.46
SMPD3-207ENST00000566466 S100A6P06703 90 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms