RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SPINK6Q6UWN8 80 aa11.34□□□□□ -0.59
USB1-213ENST00000566292 Q6ZRP5 223 aa11.34□□□□□ -0.59
USB1-213ENST00000566292 SPANXA1Q9NS26 97 aa11.34□□□□□ -0.59
USB1-213ENST00000566292 IGHV3OR16-9A0A0B4J2B5 98 aa11.33□□□□□ -0.6
USB1-213ENST00000566292 A0A0J9YXV3 536 aa11.33□□□□□ -0.6
USB1-213ENST00000566292 MRPS36P82909 103 aaKnown RBP11.33□□□□□ -0.6
USB1-213ENST00000566292 PPBPP02775 128 aa11.32□□□□□ -0.6
USB1-213ENST00000566292 ODF1Q14990 250 aa11.32□□□□□ -0.6
USB1-213ENST00000566292 C9orf116Q5BN46 136 aaPredicted RBP11.32□□□□□ -0.6
USB1-213ENST00000566292 OR10D4PQ8NGN7 298 aa11.32□□□□□ -0.6
USB1-213ENST00000566292 RPL18AQ02543 176 aaKnown RBP11.31□□□□□ -0.6
USB1-213ENST00000566292 ORAOV1Q8WV07 137 aa11.31□□□□□ -0.6
USB1-213ENST00000566292 RNF151Q2KHN1 245 aa11.3□□□□□ -0.6
USB1-213ENST00000566292 ATP5L2Q7Z4Y8 100 aa11.3□□□□□ -0.6
USB1-213ENST00000566292 ORMDL3Q8N138 153 aa11.3□□□□□ -0.6
USB1-213ENST00000566292 IFITM10A6NMD0 228 aa11.29□□□□□ -0.6
USB1-213ENST00000566292 KRTAP10-8P60410 259 aa11.29□□□□□ -0.6
USB1-213ENST00000566292 REG3GQ6UW15 175 aa11.29□□□□□ -0.6
USB1-213ENST00000566292 TMEM136Q6ZRR5 245 aa11.29□□□□□ -0.6
USB1-213ENST00000566292 PRELID3AQ96N28 172 aa11.29□□□□□ -0.6
USB1-213ENST00000566292 MRPL35Q9NZE8 188 aaKnown RBP11.29□□□□□ -0.6
USB1-213ENST00000566292 C10orf25Q5T742 122 aa11.28□□□□□ -0.6
USB1-213ENST00000566292 PHF5AQ7RTV0 110 aaKnown RBP11.27□□□□□ -0.61
USB1-213ENST00000566292 PSORS1C2Q9UIG4 136 aa11.27□□□□□ -0.61
USB1-213ENST00000566292 F8WDY8 70 aa11.26□□□□□ -0.61
USB1-213ENST00000566292 NDUFA1O15239 70 aa11.26□□□□□ -0.61
USB1-213ENST00000566292 RAB5AP20339 215 aa11.26□□□□□ -0.61
USB1-213ENST00000566292 PYGO1Q9Y3Y4 419 aa11.26□□□□□ -0.61
USB1-213ENST00000566292 IGLV4-3A0A075B6K6 122 aa11.25□□□□□ -0.61
USB1-213ENST00000566292 PRSS47A8MTI9 375 aa11.25□□□□□ -0.61
USB1-213ENST00000566292 IFI27P40305 119 aaPredicted RBP11.25□□□□□ -0.61
USB1-213ENST00000566292 UNQ6190/PRO20217Q6UXQ8 127 aa11.25□□□□□ -0.61
USB1-213ENST00000566292 KIAA0087Q14695 138 aa11.24□□□□□ -0.61
USB1-213ENST00000566292 IMMP2LQ96T52 175 aa11.24□□□□□ -0.61
USB1-213ENST00000566292 C6orf48Q9UBA6 75 aa11.24□□□□□ -0.61
USB1-213ENST00000566292 LRP2P98164 4655 aa11.24□□□□□ -0.61
USB1-213ENST00000566292 A0A087WZ39 114 aa11.23□□□□□ -0.61
USB1-213ENST00000566292 TGIF2-C20orf24A0A0A6YYL0 155 aa11.23□□□□□ -0.61
USB1-213ENST00000566292 LOC389332A0A1B0GUA5 103 aa11.23□□□□□ -0.61
USB1-213ENST00000566292 MT-ND6P03923 174 aa11.23□□□□□ -0.61
USB1-213ENST00000566292 TLX1NBP0CAT3 122 aa11.23□□□□□ -0.61
USB1-213ENST00000566292 LINC00242Q5T6M2 205 aa11.23□□□□□ -0.61
USB1-213ENST00000566292 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
USB1-213ENST00000566292 FAM168BA1KXE4 195 aa11.22□□□□□ -0.61
USB1-213ENST00000566292 PNRC1Q12796 327 aaPredicted RBP11.22□□□□□ -0.61
USB1-213ENST00000566292 LAMTOR2Q9Y2Q5 125 aa11.22□□□□□ -0.61
USB1-213ENST00000566292 C1orf137Q5JT78 98 aa11.21□□□□□ -0.61
USB1-213ENST00000566292 ANAPC16Q96DE5 110 aa11.21□□□□□ -0.61
USB1-213ENST00000566292 MAP1LC3AQ9H492 121 aa11.21□□□□□ -0.61
USB1-213ENST00000566292 ZC2HC1BQ5TFG8 222 aa11.2□□□□□ -0.62
USB1-213ENST00000566292 KRTAP11-1Q8IUC1 163 aa11.2□□□□□ -0.62
USB1-213ENST00000566292 Q8N8P6 123 aa11.2□□□□□ -0.62
USB1-213ENST00000566292 MT-ND4LP03901 98 aa11.19□□□□□ -0.62
USB1-213ENST00000566292 UBE2D1P51668 147 aa11.19□□□□□ -0.62
USB1-213ENST00000566292 TEX43Q6ZNM6 134 aa11.19□□□□□ -0.62
USB1-213ENST00000566292 LINC00173Q6ZV60 143 aa11.19□□□□□ -0.62
USB1-213ENST00000566292 GAGE2EQ4V326 116 aa11.18□□□□□ -0.62
USB1-213ENST00000566292 C2orf82Q6UX34 121 aa11.18□□□□□ -0.62
USB1-213ENST00000566292 C2orf66Q6UXQ4 117 aa11.18□□□□□ -0.62
USB1-213ENST00000566292 FAM19A5Q7Z5A7 132 aaPredicted RBP11.18□□□□□ -0.62
USB1-213ENST00000566292 KRTAP7-1Q8IUC3 87 aa11.18□□□□□ -0.62
USB1-213ENST00000566292 GAGE2DQ9UEU5 116 aa11.18□□□□□ -0.62
USB1-213ENST00000566292 CYSLTR1Q9Y271 337 aa11.18□□□□□ -0.62
USB1-213ENST00000566292 AMELXQ99217 191 aa11.17□□□□□ -0.62
USB1-213ENST00000566292 TRBV30A0A0K0K1B3 111 aa11.16□□□□□ -0.62
USB1-213ENST00000566292 IGLV7-43P04211 117 aa11.16□□□□□ -0.62
USB1-213ENST00000566292 LINC01561Q8N1V8 128 aa11.15□□□□□ -0.62
USB1-213ENST00000566292 C2orf88Q9BSF0 95 aa11.15□□□□□ -0.62
USB1-213ENST00000566292 IGIPA6NJ69 53 aa11.14□□□□□ -0.63
USB1-213ENST00000566292 RAB14P61106 215 aa11.14□□□□□ -0.63
USB1-213ENST00000566292 ORMDL2Q53FV1 153 aa11.14□□□□□ -0.63
USB1-213ENST00000566292 Q6ZN92 141 aa11.14□□□□□ -0.63
USB1-213ENST00000566292 VCX2Q9H322 139 aa11.14□□□□□ -0.63
USB1-213ENST00000566292 FAM19A3Q7Z5A8 133 aa11.13□□□□□ -0.63
USB1-213ENST00000566292 NDUFC2-KCTD14E9PQ53 114 aa11.12□□□□□ -0.63
USB1-213ENST00000566292 K7EMI3 77 aa11.12□□□□□ -0.63
USB1-213ENST00000566292 NPSP0C0P6 89 aa11.12□□□□□ -0.63
USB1-213ENST00000566292 C9orf129Q5T035 196 aaKnown RBP11.12□□□□□ -0.63
USB1-213ENST00000566292 PACRGQ96M98 296 aaPredicted RBP11.12□□□□□ -0.63
USB1-213ENST00000566292 M0QXV9 152 aa11.11□□□□□ -0.63
USB1-213ENST00000566292 DIRC1Q969H9 104 aa11.11□□□□□ -0.63
USB1-213ENST00000566292 CTDSP1Q9GZU7 261 aa11.11□□□□□ -0.63
USB1-213ENST00000566292 NXT2Q9NPJ8 142 aaKnown RBP11.11□□□□□ -0.63
USB1-213ENST00000566292 RNF213Q63HN8 5207 aa11.1□□□□□ -0.63
USB1-213ENST00000566292 TOMM7Q9P0U1 55 aa11.1□□□□□ -0.63
USB1-213ENST00000566292 H0Y9J4 135 aa11.09□□□□□ -0.63
USB1-213ENST00000566292 ADCYAP1P18509 176 aa11.09□□□□□ -0.63
USB1-213ENST00000566292 CLLU1Q5K131 121 aa11.09□□□□□ -0.63
USB1-213ENST00000566292 PRSS2P07478 247 aa11.08□□□□□ -0.64
USB1-213ENST00000566292 KIAA1644Q3SXP7 199 aa11.08□□□□□ -0.64
USB1-213ENST00000566292 PRR26Q8N8Z3 221 aa11.08□□□□□ -0.64
USB1-213ENST00000566292 UBE2BP63146 152 aa11.07□□□□□ -0.64
USB1-213ENST00000566292 Q8IZM0 81 aa11.07□□□□□ -0.64
USB1-213ENST00000566292 TOMM6Q96B49 74 aa11.07□□□□□ -0.64
USB1-213ENST00000566292 TIMM17AQ99595 171 aa11.07□□□□□ -0.64
USB1-213ENST00000566292 CDKN2A-AS1Q9UH64 79 aa11.07□□□□□ -0.64
USB1-213ENST00000566292 CKS1BP61024 79 aa11.06□□□□□ -0.64
USB1-213ENST00000566292 HERVK_113P63121 156 aa11.06□□□□□ -0.64
USB1-213ENST00000566292 C6orf226Q5I0X4 101 aa11.06□□□□□ -0.64
USB1-213ENST00000566292 LINC00469Q8N7U9 141 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms