RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 E7EUB6 86 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 HIST1H2BKO60814 126 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 PRB1P04280 392 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 HIST1H2BJP06899 126 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 ZNF705BP0CI00 300 aaPredicted RBP2□□□□□ -2.09
CNOT1-209ENST00000566240 IGLC2P0DOY2 106 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 CBLN1P23435 193 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 SNRPD3P62318 126 aaKnown RBP2□□□□□ -2.09
CNOT1-209ENST00000566240 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 MRPL54Q6P161 138 aaKnown RBP2□□□□□ -2.09
CNOT1-209ENST00000566240 SMIM20Q8N5G0 67 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 DYNLRB2Q8TF09 96 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 FAM167A-AS1Q96KT0 104 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 V9GYV3 84 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 RIF1Q5UIP0 2472 aaKnown RBP2□□□□□ -2.09
CNOT1-209ENST00000566240 USP34Q70CQ2 3546 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 PCNX1Q96RV3 2341 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 PKDREJQ9NTG1 2253 aa2□□□□□ -2.09
CNOT1-209ENST00000566240 VCANP13611 3396 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 A0A1B0GUT8 65 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 SMIM27A0A1W2PRY6 76 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 C7orf71A4D174 169 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 F2Z2F3 143 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 G3V318 75 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 SPINK4O60575 86 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 RNASE4P34096 147 aaKnown RBP1.99□□□□□ -2.09
CNOT1-209ENST00000566240 HIST1H1AQ02539 215 aaPredicted RBP1.99□□□□□ -2.09
CNOT1-209ENST00000566240 TOMM20LQ6UXN7 152 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 PATE2Q6UY27 113 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 EXOC3-AS1Q8N2X6 119 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 ZNF418Q8TF45 676 aaPredicted RBP1.99□□□□□ -2.09
CNOT1-209ENST00000566240 NIT2Q9NQR4 276 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 MRPL36Q9P0J6 103 aaKnown RBP1.99□□□□□ -2.09
CNOT1-209ENST00000566240 HSPB8Q9UJY1 196 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 LENEPQ9Y5L5 61 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 ANKHD1Q8IWZ3 2542 aaKnown RBP1.99□□□□□ -2.09
CNOT1-209ENST00000566240 FREM2Q5SZK8 3169 aa1.99□□□□□ -2.09
CNOT1-209ENST00000566240 COL6A6A6NMZ7 2263 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 ABCA4P78363 2273 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 NAV3Q8IVL0 2385 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 IGKV2-40A0A087WW87 121 aaPredicted RBP1.98□□□□□ -2.09
CNOT1-209ENST00000566240 TRAV21A0A0B4J279 112 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 TRBV6-5A0A0K0K1A5 114 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 M0R2Z0 102 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 PPP1R17O96001 155 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 IGKV2D-40P01614 121 aaPredicted RBP1.98□□□□□ -2.09
CNOT1-209ENST00000566240 ASIPP42127 132 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 KRTDAPP60985 99 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 PKIAP61925 76 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 Q0VG73 95 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 PMCHL1Q16048 86 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 DEFB112Q30KQ8 113 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 SPANXN1Q5VSR9 72 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 NUP35Q8NFH5 326 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 CHCHD1Q96BP2 118 aaKnown RBP1.98□□□□□ -2.09
CNOT1-209ENST00000566240 AP1S3Q96PC3 154 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 VAMP8Q9BV40 100 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 TMEM191AQ9H0A3 160 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 NHP2Q9NX24 153 aaKnown RBP1.98□□□□□ -2.09
CNOT1-209ENST00000566240 LAMTOR2Q9Y2Q5 125 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 SPTBN5Q9NRC6 3674 aaKnown RBP1.98□□□□□ -2.09
CNOT1-209ENST00000566240 WDFY4Q6ZS81 3184 aa1.98□□□□□ -2.09
CNOT1-209ENST00000566240 TNCP24821 2201 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 CR1P17927 2039 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 LINC01549A6NIU2 74 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 M0R3E3 92 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 TAX1BP3O14907 124 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 CRYBA4P53673 196 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 KLK9Q2XQG4 91 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 OR10AG1Q8NH19 301 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 Q8TAT8 98 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 C4orf3Q8WVX3 66 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 ZC2HC1AQ96GY0 325 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 ODF3Q96PU9 254 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 RHPN1-AS1Q9BWJ2 59 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 NXT2Q9NPJ8 142 aaKnown RBP1.97□□□□□ -2.09
CNOT1-209ENST00000566240 KLK9Q9UKQ9 250 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 TIMM8BQ9Y5J9 83 aaPredicted RBP1.97□□□□□ -2.09
CNOT1-209ENST00000566240 SPEGQ15772 3267 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 A0A0C4DFX4 3053 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 RP1L1Q8IWN7 2480 aaPredicted RBP1.97□□□□□ -2.09
CNOT1-209ENST00000566240 HIVEP3Q5T1R4 2406 aa1.97□□□□□ -2.09
CNOT1-209ENST00000566240 IGKV3-7A0A075B6H7 116 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 TRAV2A0A0B4J234 112 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 H3BVH4 76 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 LEPROTL1O95214 131 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 HBDP02042 147 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 MGPP08493 103 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 ARMS2P0C7Q2 107 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 CKS2P33552 79 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 FOXA3P55318 350 aaPredicted RBP1.96□□□□□ -2.1
CNOT1-209ENST00000566240 TCTAP57738 103 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 BLCAPP62952 87 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 PSMG4Q5JS54 123 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 C18orf32Q8TCD1 76 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 PRELID3AQ96N28 172 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 PRADC1Q9BSG0 188 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 TMEM70Q9BUB7 260 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms