RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 Q5VSD8 79 aa8.92□□□□□ -0.98
HERPUD1-210ENST00000565966 TEX43Q6ZNM6 134 aa8.92□□□□□ -0.98
HERPUD1-210ENST00000565966 LINC00173Q6ZV60 143 aa8.92□□□□□ -0.98
HERPUD1-210ENST00000565966 C5orf38Q86SI9 138 aa8.92□□□□□ -0.98
HERPUD1-210ENST00000565966 AMELXQ99217 191 aa8.92□□□□□ -0.98
HERPUD1-210ENST00000565966 TIMM17AQ99595 171 aa8.92□□□□□ -0.98
HERPUD1-210ENST00000565966 CHAC1Q9BUX1 264 aa8.92□□□□□ -0.98
HERPUD1-210ENST00000565966 Q6ZN92 141 aa8.91□□□□□ -0.98
HERPUD1-210ENST00000565966 SCXQ7RTU7 201 aa8.91□□□□□ -0.98
HERPUD1-210ENST00000565966 ERASQ7Z444 233 aa8.91□□□□□ -0.98
HERPUD1-210ENST00000565966 VCX2Q9H322 139 aa8.91□□□□□ -0.98
HERPUD1-210ENST00000565966 IGHV3OR16-9A0A0B4J2B5 98 aa8.9□□□□□ -0.98
HERPUD1-210ENST00000565966 LINC01549A6NIU2 74 aa8.9□□□□□ -0.98
HERPUD1-210ENST00000565966 LINC00614P0C842 121 aa8.9□□□□□ -0.98
HERPUD1-210ENST00000565966 MALP21145 153 aa8.9□□□□□ -0.98
HERPUD1-210ENST00000565966 UBE2D1P51668 147 aa8.9□□□□□ -0.98
HERPUD1-210ENST00000565966 LINC00242Q5T6M2 205 aa8.9□□□□□ -0.98
HERPUD1-210ENST00000565966 SDIM1Q6ZPB5 146 aa8.9□□□□□ -0.98
HERPUD1-210ENST00000565966 SCGB3A1Q96QR1 104 aa8.9□□□□□ -0.98
HERPUD1-210ENST00000565966 C2orf88Q9BSF0 95 aa8.9□□□□□ -0.98
HERPUD1-210ENST00000565966 PCLOQ9Y6V0 5065 aa8.89□□□□□ -0.99
HERPUD1-210ENST00000565966 IGHV3-64A0A075B6Q5 118 aa8.89□□□□□ -0.99
HERPUD1-210ENST00000565966 A0A096LNJ9 63 aa8.89□□□□□ -0.99
HERPUD1-210ENST00000565966 COLCA2A8K830 154 aa8.89□□□□□ -0.99
HERPUD1-210ENST00000565966 PAPPA-AS1Q5QFB9 102 aa8.89□□□□□ -0.99
HERPUD1-210ENST00000565966 CIRBP-AS1Q8TBR5 109 aa8.89□□□□□ -0.99
HERPUD1-210ENST00000565966 LINC00526Q96FQ7 95 aa8.89□□□□□ -0.99
HERPUD1-210ENST00000565966 ABCA13Q86UQ4 5058 aa8.89□□□□□ -0.99
HERPUD1-210ENST00000565966 SCO1O75880 301 aa8.88□□□□□ -0.99
HERPUD1-210ENST00000565966 TRGC2P03986 189 aa8.88□□□□□ -0.99
HERPUD1-210ENST00000565966 RAB5BP61020 215 aa8.88□□□□□ -0.99
HERPUD1-210ENST00000565966 COX6A2Q02221 97 aa8.88□□□□□ -0.99
HERPUD1-210ENST00000565966 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
HERPUD1-210ENST00000565966 APOMO95445 188 aa8.87□□□□□ -0.99
HERPUD1-210ENST00000565966 FAM19A3Q7Z5A8 133 aa8.87□□□□□ -0.99
HERPUD1-210ENST00000565966 VPS13BQ7Z7G8 4022 aa8.86□□□□□ -0.99
HERPUD1-210ENST00000565966 IGLV4-69A0A075B6H9 119 aa8.86□□□□□ -0.99
HERPUD1-210ENST00000565966 A0A087WZ39 114 aa8.86□□□□□ -0.99
HERPUD1-210ENST00000565966 LINC00528Q8N1L1 170 aa8.86□□□□□ -0.99
HERPUD1-210ENST00000565966 HBDP02042 147 aa8.85□□□□□ -0.99
HERPUD1-210ENST00000565966 PMCHL1Q16048 86 aa8.85□□□□□ -0.99
HERPUD1-210ENST00000565966 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.85□□□□□ -0.99
HERPUD1-210ENST00000565966 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.84□□□□□ -0.99
HERPUD1-210ENST00000565966 PLA2G1BP04054 148 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-210ENST00000565966 INAFM2P0DMQ5 153 aa8.84□□□□□ -0.99
HERPUD1-210ENST00000565966 SPAG11BQ08648 103 aa8.84□□□□□ -0.99
HERPUD1-210ENST00000565966 SYCNQ0VAF6 134 aa8.84□□□□□ -0.99
HERPUD1-210ENST00000565966 CIRBPQ14011 172 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-210ENST00000565966 PDZD11Q5EBL8 140 aa8.84□□□□□ -0.99
HERPUD1-210ENST00000565966 OR10D4PQ8NGN7 298 aa8.84□□□□□ -0.99
HERPUD1-210ENST00000565966 ORAOV1Q8WV07 137 aa8.84□□□□□ -0.99
HERPUD1-210ENST00000565966 CHCHD1Q96BP2 118 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-210ENST00000565966 SRRM2Q9UQ35 2752 aaKnown RBP8.84□□□□□ -1
HERPUD1-210ENST00000565966 A0A0J9YXV3 536 aa8.83□□□□□ -1
HERPUD1-210ENST00000565966 PANO1I0J062 215 aa8.83□□□□□ -1
HERPUD1-210ENST00000565966 SEC11AP67812 179 aa8.83□□□□□ -1
HERPUD1-210ENST00000565966 Q6ZRU5 148 aa8.83□□□□□ -1
HERPUD1-210ENST00000565966 LINC01561Q8N1V8 128 aa8.83□□□□□ -1
HERPUD1-210ENST00000565966 DPH3Q96FX2 82 aa8.83□□□□□ -1
HERPUD1-210ENST00000565966 C2orf48Q96LS8 159 aa8.83□□□□□ -1
HERPUD1-210ENST00000565966 CARD19Q96LW7 228 aa8.83□□□□□ -1
HERPUD1-210ENST00000565966 CST9LQ9H4G1 147 aa8.83□□□□□ -1
HERPUD1-210ENST00000565966 HERVK_113P63121 156 aa8.82□□□□□ -1
HERPUD1-210ENST00000565966 PMVKQ15126 192 aa8.82□□□□□ -1
HERPUD1-210ENST00000565966 BAGE3Q86Y29 109 aa8.82□□□□□ -1
HERPUD1-210ENST00000565966 CAMK2N2Q96S95 79 aa8.82□□□□□ -1
HERPUD1-210ENST00000565966 GEMIN7Q9H840 131 aaKnown RBP8.81□□□□□ -1
HERPUD1-210ENST00000565966 CDKN2A-AS1Q9UH64 79 aa8.81□□□□□ -1
HERPUD1-210ENST00000565966 PKIGQ9Y2B9 76 aa8.81□□□□□ -1
HERPUD1-210ENST00000565966 TINCRA0A1B0GVN0 87 aa8.8□□□□□ -1
HERPUD1-210ENST00000565966 CHTF8P0CG12 524 aa8.8□□□□□ -1
HERPUD1-210ENST00000565966 KIAA0087Q14695 138 aa8.8□□□□□ -1
HERPUD1-210ENST00000565966 SPACA4Q8TDM5 124 aa8.8□□□□□ -1
HERPUD1-210ENST00000565966 A0A087WYN8 130 aa8.79□□□□□ -1
HERPUD1-210ENST00000565966 F8WDY8 70 aa8.79□□□□□ -1
HERPUD1-210ENST00000565966 ATP5LO75964 103 aa8.79□□□□□ -1
HERPUD1-210ENST00000565966 LINC00310P59036 64 aa8.79□□□□□ -1
HERPUD1-210ENST00000565966 FLG2Q5D862 2391 aaPredicted RBP8.79□□□□□ -1
HERPUD1-210ENST00000565966 IGLV5-45A0A087WSX0 123 aa8.78□□□□□ -1
HERPUD1-210ENST00000565966 IGKV2-24A0A0C4DH68 120 aa8.78□□□□□ -1
HERPUD1-210ENST00000565966 HSBP1O75506 76 aa8.78□□□□□ -1
HERPUD1-210ENST00000565966 NDUFA6P56556 154 aa8.78□□□□□ -1
HERPUD1-210ENST00000565966 LINC00469Q8N7U9 141 aa8.78□□□□□ -1
HERPUD1-210ENST00000565966 A0A096LNI7 61 aa8.77□□□□□ -1.01
HERPUD1-210ENST00000565966 NDUFA1O15239 70 aa8.77□□□□□ -1.01
HERPUD1-210ENST00000565966 SERF1AO75920 110 aa8.77□□□□□ -1.01
HERPUD1-210ENST00000565966 RNF151Q2KHN1 245 aa8.77□□□□□ -1.01
HERPUD1-210ENST00000565966 MAJINQ3KP22 176 aa8.77□□□□□ -1.01
HERPUD1-210ENST00000565966 C10orf25Q5T742 122 aa8.77□□□□□ -1.01
HERPUD1-210ENST00000565966 UNQ6190/PRO20217Q6UXQ8 127 aa8.77□□□□□ -1.01
HERPUD1-210ENST00000565966 FAM19A2Q8N3H0 131 aa8.77□□□□□ -1.01
HERPUD1-210ENST00000565966 MRPL35Q9NZE8 188 aaKnown RBP8.77□□□□□ -1.01
HERPUD1-210ENST00000565966 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
HERPUD1-210ENST00000565966 LOC107984640A0A0U1RRK4 108 aa8.76□□□□□ -1.01
HERPUD1-210ENST00000565966 IGLC3P0DOY3 106 aa8.76□□□□□ -1.01
HERPUD1-210ENST00000565966 PLAC8Q9NZF1 115 aa8.76□□□□□ -1.01
HERPUD1-210ENST00000565966 SMIM1B2RUZ4 78 aa8.75□□□□□ -1.01
HERPUD1-210ENST00000565966 NUPR1O60356 82 aa8.75□□□□□ -1.01
HERPUD1-210ENST00000565966 S100A1P23297 94 aa8.75□□□□□ -1.01
HERPUD1-210ENST00000565966 C2orf82Q6UX34 121 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms