RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 ATP5LO75964 103 aa8.19□□□□□ -1.1
SHCBP1-204ENST00000565887 FUSP35637 526 aaKnown RBP eCLIP8.19□□□□□ -1.1
SHCBP1-204ENST00000565887 UBE2D1P51668 147 aa8.19□□□□□ -1.1
SHCBP1-204ENST00000565887 KRTAP10-1P60331 282 aa8.19□□□□□ -1.1
SHCBP1-204ENST00000565887 LINC00242Q5T6M2 205 aa8.19□□□□□ -1.1
SHCBP1-204ENST00000565887 BAGE3Q86Y29 109 aa8.19□□□□□ -1.1
SHCBP1-204ENST00000565887 IGHV3-64A0A075B6Q5 118 aa8.18□□□□□ -1.1
SHCBP1-204ENST00000565887 A0A087WZ39 114 aa8.18□□□□□ -1.1
SHCBP1-204ENST00000565887 HERVK_113P63121 156 aa8.18□□□□□ -1.1
SHCBP1-204ENST00000565887 PMVKQ15126 192 aa8.18□□□□□ -1.1
SHCBP1-204ENST00000565887 C5orf38Q86SI9 138 aa8.18□□□□□ -1.1
SHCBP1-204ENST00000565887 OR10D4PQ8NGN7 298 aa8.18□□□□□ -1.1
SHCBP1-204ENST00000565887 LINC00173Q6ZV60 143 aa8.17□□□□□ -1.1
SHCBP1-204ENST00000565887 URB1-AS1Q96HZ7 61 aa8.17□□□□□ -1.1
SHCBP1-204ENST00000565887 C2orf48Q96LS8 159 aa8.17□□□□□ -1.1
SHCBP1-204ENST00000565887 CST9LQ9H4G1 147 aa8.17□□□□□ -1.1
SHCBP1-204ENST00000565887 GEMIN7Q9H840 131 aaKnown RBP8.17□□□□□ -1.1
SHCBP1-204ENST00000565887 HSBP1O75506 76 aa8.16□□□□□ -1.1
SHCBP1-204ENST00000565887 HIGD2BQ4VC39 106 aa8.16□□□□□ -1.1
SHCBP1-204ENST00000565887 TINCRA0A1B0GVN0 87 aa8.15□□□□□ -1.1
SHCBP1-204ENST00000565887 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
SHCBP1-204ENST00000565887 PDZD11Q5EBL8 140 aa8.15□□□□□ -1.1
SHCBP1-204ENST00000565887 Q6ZSA8 131 aa8.15□□□□□ -1.1
SHCBP1-204ENST00000565887 IGLV4-69A0A075B6H9 119 aa8.14□□□□□ -1.11
SHCBP1-204ENST00000565887 A0A096LNJ9 63 aa8.14□□□□□ -1.11
SHCBP1-204ENST00000565887 SCO1O75880 301 aa8.14□□□□□ -1.11
SHCBP1-204ENST00000565887 SLPIP03973 132 aa8.14□□□□□ -1.11
SHCBP1-204ENST00000565887 COX6A2Q02221 97 aa8.14□□□□□ -1.11
SHCBP1-204ENST00000565887 SDIM1Q6ZPB5 146 aa8.14□□□□□ -1.11
SHCBP1-204ENST00000565887 RNF151Q2KHN1 245 aa8.13□□□□□ -1.11
SHCBP1-204ENST00000565887 ZC2HC1BQ5TFG8 222 aa8.13□□□□□ -1.11
SHCBP1-204ENST00000565887 ORAOV1Q8WV07 137 aa8.13□□□□□ -1.11
SHCBP1-204ENST00000565887 CARD19Q96LW7 228 aa8.13□□□□□ -1.11
SHCBP1-204ENST00000565887 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
SHCBP1-204ENST00000565887 LINC00474Q9P2X8 69 aa8.13□□□□□ -1.11
SHCBP1-204ENST00000565887 A0A0J9YXV3 536 aa8.12□□□□□ -1.11
SHCBP1-204ENST00000565887 XGP55808 180 aa8.12□□□□□ -1.11
SHCBP1-204ENST00000565887 NDUFA6P56556 154 aa8.12□□□□□ -1.11
SHCBP1-204ENST00000565887 SPAG11BQ08648 103 aa8.12□□□□□ -1.11
SHCBP1-204ENST00000565887 PMCHL1Q16048 86 aa8.12□□□□□ -1.11
SHCBP1-204ENST00000565887 PACRGQ96M98 296 aaPredicted RBP8.12□□□□□ -1.11
SHCBP1-204ENST00000565887 CHAC1Q9BUX1 264 aa8.12□□□□□ -1.11
SHCBP1-204ENST00000565887 DYNC1H1Q14204 4646 aaKnown RBP8.11□□□□□ -1.11
SHCBP1-204ENST00000565887 H3BRM9 83 aa8.11□□□□□ -1.11
SHCBP1-204ENST00000565887 NDUFA1O15239 70 aa8.11□□□□□ -1.11
SHCBP1-204ENST00000565887 PRSS2P07478 247 aa8.11□□□□□ -1.11
SHCBP1-204ENST00000565887 LINC01620Q4KN68 170 aa8.11□□□□□ -1.11
SHCBP1-204ENST00000565887 IFI27L1Q96BM0 104 aa8.11□□□□□ -1.11
SHCBP1-204ENST00000565887 FAM30AQ9NZY2 134 aa8.11□□□□□ -1.11
SHCBP1-204ENST00000565887 CDKN2A-AS1Q9UH64 79 aa8.11□□□□□ -1.11
SHCBP1-204ENST00000565887 IGLV5-45A0A087WSX0 123 aa8.1□□□□□ -1.11
SHCBP1-204ENST00000565887 TRAV12-1A0A0B4J245 112 aa8.1□□□□□ -1.11
SHCBP1-204ENST00000565887 C6orf226Q5I0X4 101 aa8.1□□□□□ -1.11
SHCBP1-204ENST00000565887 LINC00469Q8N7U9 141 aa8.1□□□□□ -1.11
SHCBP1-204ENST00000565887 DPH3Q96FX2 82 aa8.1□□□□□ -1.11
SHCBP1-204ENST00000565887 MRPL35Q9NZE8 188 aaKnown RBP8.1□□□□□ -1.11
SHCBP1-204ENST00000565887 HSPB8Q9UJY1 196 aa8.1□□□□□ -1.11
SHCBP1-204ENST00000565887 ATP6V1G1O75348 118 aa8.09□□□□□ -1.11
SHCBP1-204ENST00000565887 SERF1AO75920 110 aa8.09□□□□□ -1.11
SHCBP1-204ENST00000565887 LEPROTL1O95214 131 aa8.09□□□□□ -1.11
SHCBP1-204ENST00000565887 IGLC3P0DOY3 106 aa8.09□□□□□ -1.11
SHCBP1-204ENST00000565887 Q8IZM0 81 aa8.09□□□□□ -1.11
SHCBP1-204ENST00000565887 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
SHCBP1-204ENST00000565887 LOC107984640A0A0U1RRK4 108 aa8.08□□□□□ -1.12
SHCBP1-204ENST00000565887 CKS1BP61024 79 aa8.08□□□□□ -1.12
SHCBP1-204ENST00000565887 CIRBPQ14011 172 aaKnown RBP8.08□□□□□ -1.12
SHCBP1-204ENST00000565887 KIAA0087Q14695 138 aa8.08□□□□□ -1.12
SHCBP1-204ENST00000565887 Q6ZRU5 148 aa8.08□□□□□ -1.12
SHCBP1-204ENST00000565887 Q8N1X5 172 aa8.08□□□□□ -1.12
SHCBP1-204ENST00000565887 FAM19A2Q8N3H0 131 aa8.08□□□□□ -1.12
SHCBP1-204ENST00000565887 LRP1BQ9NZR2 4599 aa8.08□□□□□ -1.12
SHCBP1-204ENST00000565887 DNAH5Q8TE73 4624 aa8.08□□□□□ -1.12
SHCBP1-204ENST00000565887 TRBV30A0A0K0K1B3 111 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 FAM229AH3BQW9 127 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 HIST1H2BKO60814 126 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 HIST1H2BJP06899 126 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 HIST1H2BOP23527 126 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 HIST1H2BBP33778 126 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 CXCL5P42830 114 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 HIST1H2BDP58876 126 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 HIST1H2BCP62807 126 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 HIST2H2BEQ16778 126 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 HIST1H2BHQ93079 126 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 HIST1H2BNQ99877 126 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 HIST1H2BMQ99879 126 aa8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 CHTOPQ9Y3Y2 248 aaKnown RBP8.07□□□□□ -1.12
SHCBP1-204ENST00000565887 KIAA1109Q2LD37 5005 aa8.06□□□□□ -1.12
SHCBP1-204ENST00000565887 TOMM7Q9P0U1 55 aa8.06□□□□□ -1.12
SHCBP1-204ENST00000565887 UNQ6190/PRO20217Q6UXQ8 127 aa8.05□□□□□ -1.12
SHCBP1-204ENST00000565887 SCXQ7RTU7 201 aa8.05□□□□□ -1.12
SHCBP1-204ENST00000565887 CIRBP-AS1Q8TBR5 109 aa8.05□□□□□ -1.12
SHCBP1-204ENST00000565887 SMIM1B2RUZ4 78 aa8.04□□□□□ -1.12
SHCBP1-204ENST00000565887 F8VRH5 84 aa8.04□□□□□ -1.12
SHCBP1-204ENST00000565887 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
SHCBP1-204ENST00000565887 LINC00310P59036 64 aa8.04□□□□□ -1.12
SHCBP1-204ENST00000565887 SFTA2Q6UW10 78 aa8.04□□□□□ -1.12
SHCBP1-204ENST00000565887 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
SHCBP1-204ENST00000565887 EPM2AB3EWF7 344 aa8.03□□□□□ -1.12
SHCBP1-204ENST00000565887 NUPR1O60356 82 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms