RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 TRAV8-4A0A0B4J246 113 aa5.64□□□□□ -1.51
VPS9D1-205ENST00000565452 LOC389332A0A1B0GUA5 103 aa5.64□□□□□ -1.51
VPS9D1-205ENST00000565452 LINC01546A6NGU7 62 aa5.64□□□□□ -1.51
VPS9D1-205ENST00000565452 CCL25O15444 150 aa5.64□□□□□ -1.51
VPS9D1-205ENST00000565452 ANGP03950 147 aaKnown RBP5.64□□□□□ -1.51
VPS9D1-205ENST00000565452 NPSP0C0P6 89 aa5.64□□□□□ -1.51
VPS9D1-205ENST00000565452 CNBPP62633 177 aaKnown RBP5.64□□□□□ -1.51
VPS9D1-205ENST00000565452 RBX1P62877 108 aa5.64□□□□□ -1.51
VPS9D1-205ENST00000565452 MIAQ16674 131 aa5.64□□□□□ -1.51
VPS9D1-205ENST00000565452 MPV17L2Q567V2 206 aa5.64□□□□□ -1.51
VPS9D1-205ENST00000565452 LCE2DQ5TA82 110 aaPredicted RBP5.64□□□□□ -1.51
VPS9D1-205ENST00000565452 ATP6V1G1O75348 118 aa5.63□□□□□ -1.51
VPS9D1-205ENST00000565452 CHTF8P0CG12 524 aa5.63□□□□□ -1.51
VPS9D1-205ENST00000565452 FGF6P10767 208 aa5.63□□□□□ -1.51
VPS9D1-205ENST00000565452 IFI27P40305 119 aaPredicted RBP5.63□□□□□ -1.51
VPS9D1-205ENST00000565452 PRR4Q16378 134 aa5.63□□□□□ -1.51
VPS9D1-205ENST00000565452 RNASEKQ6P5S7 137 aaKnown RBP5.63□□□□□ -1.51
VPS9D1-205ENST00000565452 ZNF664Q8N3J9 261 aa5.63□□□□□ -1.51
VPS9D1-205ENST00000565452 AP5S1Q9NUS5 200 aa5.63□□□□□ -1.51
VPS9D1-205ENST00000565452 PRR34Q9NV39 138 aa5.63□□□□□ -1.51
VPS9D1-205ENST00000565452 PYGO1Q9Y3Y4 419 aa5.63□□□□□ -1.51
VPS9D1-205ENST00000565452 hDV102S1A0JD36 115 aa5.62□□□□□ -1.51
VPS9D1-205ENST00000565452 LINC00614P0C842 121 aa5.62□□□□□ -1.51
VPS9D1-205ENST00000565452 OR5A1Q8NGJ0 315 aa5.62□□□□□ -1.51
VPS9D1-205ENST00000565452 C18orf32Q8TCD1 76 aa5.62□□□□□ -1.51
VPS9D1-205ENST00000565452 CDC42SE2Q9NRR3 84 aa5.62□□□□□ -1.51
VPS9D1-205ENST00000565452 SPANXA1Q9NS26 97 aa5.62□□□□□ -1.51
VPS9D1-205ENST00000565452 PSORS1C2Q9UIG4 136 aa5.62□□□□□ -1.51
VPS9D1-205ENST00000565452 CYSLTR1Q9Y271 337 aa5.62□□□□□ -1.51
VPS9D1-205ENST00000565452 IGLV4-60A0A075B6I1 120 aa5.61□□□□□ -1.51
VPS9D1-205ENST00000565452 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.61□□□□□ -1.51
VPS9D1-205ENST00000565452 IGKV2-29A2NJV5 120 aaPredicted RBP5.61□□□□□ -1.51
VPS9D1-205ENST00000565452 TRGC2P03986 189 aa5.61□□□□□ -1.51
VPS9D1-205ENST00000565452 MRPS36P82909 103 aaKnown RBP5.61□□□□□ -1.51
VPS9D1-205ENST00000565452 REG3AQ06141 175 aa5.61□□□□□ -1.51
VPS9D1-205ENST00000565452 PAPPA-AS1Q5QFB9 102 aa5.61□□□□□ -1.51
VPS9D1-205ENST00000565452 FA2HQ7L5A8 372 aa5.61□□□□□ -1.51
VPS9D1-205ENST00000565452 LINC00269Q8N2A0 174 aa5.61□□□□□ -1.51
VPS9D1-205ENST00000565452 UBE2D4Q9Y2X8 147 aa5.61□□□□□ -1.51
VPS9D1-205ENST00000565452 MAJINQ3KP22 176 aa5.6□□□□□ -1.51
VPS9D1-205ENST00000565452 C2orf66Q6UXQ4 117 aa5.6□□□□□ -1.51
VPS9D1-205ENST00000565452 Q6ZRP5 223 aa5.6□□□□□ -1.51
VPS9D1-205ENST00000565452 CHCHD1Q96BP2 118 aaKnown RBP5.6□□□□□ -1.51
VPS9D1-205ENST00000565452 SCO1O75880 301 aa5.59□□□□□ -1.51
VPS9D1-205ENST00000565452 SS18Q15532 418 aa5.59□□□□□ -1.51
VPS9D1-205ENST00000565452 ERASQ7Z444 233 aa5.59□□□□□ -1.51
VPS9D1-205ENST00000565452 STPG4Q8N801 248 aa5.59□□□□□ -1.51
VPS9D1-205ENST00000565452 TOMM6Q96B49 74 aa5.59□□□□□ -1.51
VPS9D1-205ENST00000565452 C1orf196B1AJZ1 125 aa5.58□□□□□ -1.52
VPS9D1-205ENST00000565452 RPL39P62891 51 aaKnown RBP5.58□□□□□ -1.52
VPS9D1-205ENST00000565452 COX6A2Q02221 97 aa5.58□□□□□ -1.52
VPS9D1-205ENST00000565452 Q6ZN92 141 aa5.58□□□□□ -1.52
VPS9D1-205ENST00000565452 TMEM141Q96I45 108 aa5.58□□□□□ -1.52
VPS9D1-205ENST00000565452 TIMM17AQ99595 171 aa5.58□□□□□ -1.52
VPS9D1-205ENST00000565452 LINC00959A0A1B0GUT2 108 aa5.57□□□□□ -1.52
VPS9D1-205ENST00000565452 IGIPA6NJ69 53 aa5.57□□□□□ -1.52
VPS9D1-205ENST00000565452 SLPIP03973 132 aa5.57□□□□□ -1.52
VPS9D1-205ENST00000565452 BAGE3Q86Y29 109 aa5.57□□□□□ -1.52
VPS9D1-205ENST00000565452 VCX2Q9H322 139 aa5.57□□□□□ -1.52
VPS9D1-205ENST00000565452 IGKV2-24A0A0C4DH68 120 aa5.56□□□□□ -1.52
VPS9D1-205ENST00000565452 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.56□□□□□ -1.52
VPS9D1-205ENST00000565452 HBDP02042 147 aa5.56□□□□□ -1.52
VPS9D1-205ENST00000565452 SEC11AP67812 179 aa5.56□□□□□ -1.52
VPS9D1-205ENST00000565452 CFAP161Q6P656 301 aa5.56□□□□□ -1.52
VPS9D1-205ENST00000565452 KRTAP26-1Q6PEX3 210 aa5.56□□□□□ -1.52
VPS9D1-205ENST00000565452 TEX43Q6ZNM6 134 aa5.56□□□□□ -1.52
VPS9D1-205ENST00000565452 SCGB3A1Q96QR1 104 aa5.56□□□□□ -1.52
VPS9D1-205ENST00000565452 AMELXQ99217 191 aa5.56□□□□□ -1.52
VPS9D1-205ENST00000565452 C2orf88Q9BSF0 95 aa5.56□□□□□ -1.52
VPS9D1-205ENST00000565452 LINC00474Q9P2X8 69 aa5.56□□□□□ -1.52
VPS9D1-205ENST00000565452 IGLV4-3A0A075B6K6 122 aa5.55□□□□□ -1.52
VPS9D1-205ENST00000565452 HSBP1O75506 76 aa5.55□□□□□ -1.52
VPS9D1-205ENST00000565452 ATP5LO75964 103 aa5.55□□□□□ -1.52
VPS9D1-205ENST00000565452 CD164L2Q6UWJ8 174 aa5.55□□□□□ -1.52
VPS9D1-205ENST00000565452 CHCHD10Q8WYQ3 142 aaPredicted RBP5.55□□□□□ -1.52
VPS9D1-205ENST00000565452 URB1-AS1Q96HZ7 61 aa5.55□□□□□ -1.52
VPS9D1-205ENST00000565452 IGLV10-54A0A075B6I4 117 aa5.54□□□□□ -1.52
VPS9D1-205ENST00000565452 CLPSL2Q6UWE3 100 aa5.54□□□□□ -1.52
VPS9D1-205ENST00000565452 Q6ZUT4 128 aa5.54□□□□□ -1.52
VPS9D1-205ENST00000565452 FAM19A3Q7Z5A8 133 aa5.54□□□□□ -1.52
VPS9D1-205ENST00000565452 PRR26Q8N8Z3 221 aa5.54□□□□□ -1.52
VPS9D1-205ENST00000565452 FAM104AQ969W3 186 aa5.54□□□□□ -1.52
VPS9D1-205ENST00000565452 TRAV13-1A0A0B4J241 112 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 IGKV3OR2-268A0A0C4DH90 116 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 IFITM10A6NMD0 228 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 HIST1H2BKO60814 126 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 HIST1H2BJP06899 126 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 HIST1H2BOP23527 126 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 HIST1H2BBP33778 126 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 HIST1H2BDP58876 126 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 HIST1H2BCP62807 126 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 PMVKQ15126 192 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 HIST2H2BEQ16778 126 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 PDZD11Q5EBL8 140 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 LINC01561Q8N1V8 128 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 HIST1H2BHQ93079 126 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 HIST1H2BNQ99877 126 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 HIST1H2BMQ99879 126 aa5.53□□□□□ -1.52
VPS9D1-205ENST00000565452 A0A096LNJ9 63 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms