RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
VPS9D1-204ENST00000565023 FOXI1Q12951 378 aa8.74□□□□□ -1.01
VPS9D1-204ENST00000565023 PRSS3P2Q8NHM4 247 aa8.74□□□□□ -1.01
VPS9D1-204ENST00000565023 OPRPNQ99935 248 aaPredicted RBP8.74□□□□□ -1.01
VPS9D1-204ENST00000565023 CYSLTR1Q9Y271 337 aa8.74□□□□□ -1.01
VPS9D1-204ENST00000565023 C1orf196B1AJZ1 125 aa8.73□□□□□ -1.01
VPS9D1-204ENST00000565023 G0S2P27469 103 aa8.73□□□□□ -1.01
VPS9D1-204ENST00000565023 C2orf66Q6UXQ4 117 aa8.73□□□□□ -1.01
VPS9D1-204ENST00000565023 LINC00526Q96FQ7 95 aa8.73□□□□□ -1.01
VPS9D1-204ENST00000565023 IGLV4-3A0A075B6K6 122 aa8.72□□□□□ -1.01
VPS9D1-204ENST00000565023 TRAV13-1A0A0B4J241 112 aa8.72□□□□□ -1.01
VPS9D1-204ENST00000565023 J3QL48 77 aa8.72□□□□□ -1.01
VPS9D1-204ENST00000565023 RPL37AP61513 92 aaKnown RBP8.72□□□□□ -1.01
VPS9D1-204ENST00000565023 CD164L2Q6UWJ8 174 aa8.72□□□□□ -1.01
VPS9D1-204ENST00000565023 IGIPA6NJ69 53 aa8.71□□□□□ -1.02
VPS9D1-204ENST00000565023 NPSP0C0P6 89 aa8.71□□□□□ -1.02
VPS9D1-204ENST00000565023 COX6A2Q02221 97 aa8.71□□□□□ -1.02
VPS9D1-204ENST00000565023 C18orf32Q8TCD1 76 aa8.71□□□□□ -1.02
VPS9D1-204ENST00000565023 IGKV2-24A0A0C4DH68 120 aa8.7□□□□□ -1.02
VPS9D1-204ENST00000565023 FA2HQ7L5A8 372 aa8.7□□□□□ -1.02
VPS9D1-204ENST00000565023 TOMM6Q96B49 74 aa8.7□□□□□ -1.02
VPS9D1-204ENST00000565023 TMEM141Q96I45 108 aa8.7□□□□□ -1.02
VPS9D1-204ENST00000565023 GVQW2A0A096LPI5 108 aaPredicted RBP8.69□□□□□ -1.02
VPS9D1-204ENST00000565023 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
VPS9D1-204ENST00000565023 IFITM10A6NMD0 228 aa8.69□□□□□ -1.02
VPS9D1-204ENST00000565023 KRTAP10-4P60372 401 aaPredicted RBP8.69□□□□□ -1.02
VPS9D1-204ENST00000565023 A0A087WYN8 130 aa8.68□□□□□ -1.02
VPS9D1-204ENST00000565023 LINC01549A6NIU2 74 aa8.68□□□□□ -1.02
VPS9D1-204ENST00000565023 MALP21145 153 aa8.68□□□□□ -1.02
VPS9D1-204ENST00000565023 MAJINQ3KP22 176 aa8.68□□□□□ -1.02
VPS9D1-204ENST00000565023 LINC00173Q6ZV60 143 aa8.68□□□□□ -1.02
VPS9D1-204ENST00000565023 URB1-AS1Q96HZ7 61 aa8.68□□□□□ -1.02
VPS9D1-204ENST00000565023 AMELXQ99217 191 aa8.68□□□□□ -1.02
VPS9D1-204ENST00000565023 TIMM17AQ99595 171 aa8.68□□□□□ -1.02
VPS9D1-204ENST00000565023 COLCA2A8K830 154 aa8.67□□□□□ -1.02
VPS9D1-204ENST00000565023 ZNF561-AS1K7EIQ3 104 aa8.67□□□□□ -1.02
VPS9D1-204ENST00000565023 COX7A2LO14548 114 aa8.67□□□□□ -1.02
VPS9D1-204ENST00000565023 LINC00614P0C842 121 aa8.67□□□□□ -1.02
VPS9D1-204ENST00000565023 Q6ZN92 141 aa8.67□□□□□ -1.02
VPS9D1-204ENST00000565023 TEX43Q6ZNM6 134 aa8.67□□□□□ -1.02
VPS9D1-204ENST00000565023 ERASQ7Z444 233 aa8.67□□□□□ -1.02
VPS9D1-204ENST00000565023 C5orf38Q86SI9 138 aa8.67□□□□□ -1.02
VPS9D1-204ENST00000565023 IGHV3OR16-9A0A0B4J2B5 98 aa8.66□□□□□ -1.02
VPS9D1-204ENST00000565023 SPACA4Q8TDM5 124 aa8.66□□□□□ -1.02
VPS9D1-204ENST00000565023 CARD19Q96LW7 228 aa8.66□□□□□ -1.02
VPS9D1-204ENST00000565023 SCGB3A1Q96QR1 104 aa8.66□□□□□ -1.02
VPS9D1-204ENST00000565023 VCX2Q9H322 139 aa8.66□□□□□ -1.02
VPS9D1-204ENST00000565023 A0A096LNI7 61 aa8.65□□□□□ -1.02
VPS9D1-204ENST00000565023 A0A096LNJ9 63 aa8.65□□□□□ -1.02
VPS9D1-204ENST00000565023 TRGC2P03986 189 aa8.65□□□□□ -1.02
VPS9D1-204ENST00000565023 UBE2D1P51668 147 aa8.65□□□□□ -1.02
VPS9D1-204ENST00000565023 HNRNPA3P51991 378 aaKnown RBP8.65□□□□□ -1.02
VPS9D1-204ENST00000565023 RAB5BP61020 215 aa8.65□□□□□ -1.02
VPS9D1-204ENST00000565023 CIRBPQ14011 172 aaKnown RBP8.65□□□□□ -1.02
VPS9D1-204ENST00000565023 PAPPA-AS1Q5QFB9 102 aa8.65□□□□□ -1.02
VPS9D1-204ENST00000565023 LINC00242Q5T6M2 205 aa8.65□□□□□ -1.02
VPS9D1-204ENST00000565023 ZC2HC1BQ5TFG8 222 aa8.65□□□□□ -1.02
VPS9D1-204ENST00000565023 C2orf88Q9BSF0 95 aa8.65□□□□□ -1.02
VPS9D1-204ENST00000565023 FAM19A3Q7Z5A8 133 aa8.64□□□□□ -1.03
VPS9D1-204ENST00000565023 IGLV4-69A0A075B6H9 119 aa8.63□□□□□ -1.03
VPS9D1-204ENST00000565023 SCO1O75880 301 aa8.63□□□□□ -1.03
VPS9D1-204ENST00000565023 SYCNQ0VAF6 134 aa8.63□□□□□ -1.03
VPS9D1-204ENST00000565023 STPG4Q8N801 248 aa8.63□□□□□ -1.03
VPS9D1-204ENST00000565023 KRTAP29-1A8MX34 341 aaPredicted RBP8.62□□□□□ -1.03
VPS9D1-204ENST00000565023 APOMO95445 188 aa8.62□□□□□ -1.03
VPS9D1-204ENST00000565023 CHCHD1Q96BP2 118 aaKnown RBP8.62□□□□□ -1.03
VPS9D1-204ENST00000565023 PKHD1L1Q86WI1 4243 aa8.62□□□□□ -1.03
VPS9D1-204ENST00000565023 A0A087WZ39 114 aa8.61□□□□□ -1.03
VPS9D1-204ENST00000565023 HBDP02042 147 aa8.61□□□□□ -1.03
VPS9D1-204ENST00000565023 GAGE2BQ13066 116 aa8.61□□□□□ -1.03
VPS9D1-204ENST00000565023 Q6ZRU5 148 aa8.61□□□□□ -1.03
VPS9D1-204ENST00000565023 CAMK2N2Q96S95 79 aa8.61□□□□□ -1.03
VPS9D1-204ENST00000565023 PLAC8Q9NZF1 115 aa8.61□□□□□ -1.03
VPS9D1-204ENST00000565023 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.6□□□□□ -1.03
VPS9D1-204ENST00000565023 SPAG11BQ08648 103 aa8.6□□□□□ -1.03
VPS9D1-204ENST00000565023 PMCHL1Q16048 86 aa8.6□□□□□ -1.03
VPS9D1-204ENST00000565023 PDZD11Q5EBL8 140 aa8.6□□□□□ -1.03
VPS9D1-204ENST00000565023 OR10D4PQ8NGN7 298 aa8.6□□□□□ -1.03
VPS9D1-204ENST00000565023 C7orf33Q8WU49 177 aa8.6□□□□□ -1.03
VPS9D1-204ENST00000565023 CST9LQ9H4G1 147 aa8.6□□□□□ -1.03
VPS9D1-204ENST00000565023 SEC11AP67812 179 aa8.59□□□□□ -1.03
VPS9D1-204ENST00000565023 PMVKQ15126 192 aa8.59□□□□□ -1.03
VPS9D1-204ENST00000565023 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
VPS9D1-204ENST00000565023 ORAOV1Q8WV07 137 aa8.59□□□□□ -1.03
VPS9D1-204ENST00000565023 C2orf48Q96LS8 159 aa8.59□□□□□ -1.03
VPS9D1-204ENST00000565023 A0A0J9YXV3 536 aa8.58□□□□□ -1.04
VPS9D1-204ENST00000565023 HERVK_113P63121 156 aa8.58□□□□□ -1.04
VPS9D1-204ENST00000565023 BAGE3Q86Y29 109 aa8.58□□□□□ -1.04
VPS9D1-204ENST00000565023 PKIGQ9Y2B9 76 aa8.58□□□□□ -1.04
VPS9D1-204ENST00000565023 LOC107984640A0A0U1RRK4 108 aa8.57□□□□□ -1.04
VPS9D1-204ENST00000565023 ATP5LO75964 103 aa8.57□□□□□ -1.04
VPS9D1-204ENST00000565023 RPL18AQ02543 176 aaKnown RBP8.57□□□□□ -1.04
VPS9D1-204ENST00000565023 LRP1Q07954 4544 aaKnown RBP8.56□□□□□ -1.04
VPS9D1-204ENST00000565023 TINCRA0A1B0GVN0 87 aa8.56□□□□□ -1.04
VPS9D1-204ENST00000565023 F8WDY8 70 aa8.56□□□□□ -1.04
VPS9D1-204ENST00000565023 OXTP01178 125 aa8.56□□□□□ -1.04
VPS9D1-204ENST00000565023 LINC00310P59036 64 aa8.56□□□□□ -1.04
VPS9D1-204ENST00000565023 KIAA0087Q14695 138 aa8.56□□□□□ -1.04
VPS9D1-204ENST00000565023 GEMIN7Q9H840 131 aaKnown RBP8.56□□□□□ -1.04
VPS9D1-204ENST00000565023 CDKN2A-AS1Q9UH64 79 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms