RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ATP5L2Q7Z4Y8 100 aa11.05□□□□□ -0.64
NME3-205ENST00000563854 A0A0J9YXV3 536 aa11.04□□□□□ -0.64
NME3-205ENST00000563854 RAB14P61106 215 aa11.04□□□□□ -0.64
NME3-205ENST00000563854 ORAOV1Q8WV07 137 aa11.04□□□□□ -0.64
NME3-205ENST00000563854 LOC389332A0A1B0GUA5 103 aa11.03□□□□□ -0.64
NME3-205ENST00000563854 FAM104AQ969W3 186 aa11.03□□□□□ -0.64
NME3-205ENST00000563854 C2orf48Q96LS8 159 aa11.03□□□□□ -0.64
NME3-205ENST00000563854 IFI27P40305 119 aaPredicted RBP11.02□□□□□ -0.65
NME3-205ENST00000563854 MRPS36P82909 103 aaKnown RBP11.02□□□□□ -0.65
NME3-205ENST00000563854 OR10D4PQ8NGN7 298 aa11.02□□□□□ -0.65
NME3-205ENST00000563854 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.01□□□□□ -0.65
NME3-205ENST00000563854 MT-ND4LP03901 98 aa11.01□□□□□ -0.65
NME3-205ENST00000563854 PNRC1Q12796 327 aaPredicted RBP11.01□□□□□ -0.65
NME3-205ENST00000563854 A0A1W2PNN7 141 aa11□□□□□ -0.65
NME3-205ENST00000563854 MAP1LC3AQ9H492 121 aa11□□□□□ -0.65
NME3-205ENST00000563854 TGIF2-C20orf24A0A0A6YYL0 155 aa10.99□□□□□ -0.65
NME3-205ENST00000563854 IGHV3OR16-9A0A0B4J2B5 98 aa10.99□□□□□ -0.65
NME3-205ENST00000563854 Q6ZRP5 223 aa10.99□□□□□ -0.65
NME3-205ENST00000563854 ANAPC16Q96DE5 110 aa10.99□□□□□ -0.65
NME3-205ENST00000563854 IGLV4-3A0A075B6K6 122 aa10.98□□□□□ -0.65
NME3-205ENST00000563854 C9orf116Q5BN46 136 aaPredicted RBP10.98□□□□□ -0.65
NME3-205ENST00000563854 NDUFA1O15239 70 aa10.97□□□□□ -0.65
NME3-205ENST00000563854 TMEM141Q96I45 108 aa10.97□□□□□ -0.65
NME3-205ENST00000563854 MRPL35Q9NZE8 188 aaKnown RBP10.96□□□□□ -0.65
NME3-205ENST00000563854 LAMTOR2Q9Y2Q5 125 aa10.96□□□□□ -0.65
NME3-205ENST00000563854 RNF151Q2KHN1 245 aa10.95□□□□□ -0.66
NME3-205ENST00000563854 C10orf25Q5T742 122 aa10.95□□□□□ -0.66
NME3-205ENST00000563854 SPINK6Q6UWN8 80 aa10.95□□□□□ -0.66
NME3-205ENST00000563854 UNQ6190/PRO20217Q6UXQ8 127 aa10.95□□□□□ -0.66
NME3-205ENST00000563854 TEX43Q6ZNM6 134 aa10.95□□□□□ -0.66
NME3-205ENST00000563854 PHF5AQ7RTV0 110 aaKnown RBP10.95□□□□□ -0.66
NME3-205ENST00000563854 CYSLTR1Q9Y271 337 aa10.95□□□□□ -0.66
NME3-205ENST00000563854 PYGO1Q9Y3Y4 419 aa10.95□□□□□ -0.66
NME3-205ENST00000563854 UBR4Q5T4S7 5183 aa10.95□□□□□ -0.66
NME3-205ENST00000563854 MT-ND6P03923 174 aa10.94□□□□□ -0.66
NME3-205ENST00000563854 LINC00242Q5T6M2 205 aa10.94□□□□□ -0.66
NME3-205ENST00000563854 ZC2HC1BQ5TFG8 222 aa10.94□□□□□ -0.66
NME3-205ENST00000563854 REG3GQ6UW15 175 aa10.94□□□□□ -0.66
NME3-205ENST00000563854 Q8N8P6 123 aa10.94□□□□□ -0.66
NME3-205ENST00000563854 LINC01600Q96MT4 127 aa10.94□□□□□ -0.66
NME3-205ENST00000563854 IMMP2LQ96T52 175 aa10.94□□□□□ -0.66
NME3-205ENST00000563854 C2orf88Q9BSF0 95 aa10.94□□□□□ -0.66
NME3-205ENST00000563854 PRSS47A8MTI9 375 aa10.93□□□□□ -0.66
NME3-205ENST00000563854 F8WDY8 70 aa10.93□□□□□ -0.66
NME3-205ENST00000563854 C2orf66Q6UXQ4 117 aa10.93□□□□□ -0.66
NME3-205ENST00000563854 Q6ZN92 141 aa10.93□□□□□ -0.66
NME3-205ENST00000563854 CTDSP1Q9GZU7 261 aa10.93□□□□□ -0.66
NME3-205ENST00000563854 C6orf48Q9UBA6 75 aa10.93□□□□□ -0.66
NME3-205ENST00000563854 A0A087WZ39 114 aa10.92□□□□□ -0.66
NME3-205ENST00000563854 ODF1Q14990 250 aa10.92□□□□□ -0.66
NME3-205ENST00000563854 GAGE2EQ4V326 116 aa10.92□□□□□ -0.66
NME3-205ENST00000563854 GAGE2DQ9UEU5 116 aa10.92□□□□□ -0.66
NME3-205ENST00000563854 PSORS1C2Q9UIG4 136 aa10.92□□□□□ -0.66
NME3-205ENST00000563854 ORMDL2Q53FV1 153 aa10.91□□□□□ -0.66
NME3-205ENST00000563854 CLLU1Q5K131 121 aa10.91□□□□□ -0.66
NME3-205ENST00000563854 FAM19A5Q7Z5A7 132 aaPredicted RBP10.91□□□□□ -0.66
NME3-205ENST00000563854 FAM168BA1KXE4 195 aa10.9□□□□□ -0.66
NME3-205ENST00000563854 UBE2D1P51668 147 aa10.9□□□□□ -0.66
NME3-205ENST00000563854 SRSF9Q13242 221 aaKnown RBP eCLIP10.9□□□□□ -0.66
NME3-205ENST00000563854 C1orf137Q5JT78 98 aa10.9□□□□□ -0.66
NME3-205ENST00000563854 VCX2Q9H322 139 aa10.9□□□□□ -0.66
NME3-205ENST00000563854 C2orf82Q6UX34 121 aa10.89□□□□□ -0.67
NME3-205ENST00000563854 LINC00173Q6ZV60 143 aa10.89□□□□□ -0.67
NME3-205ENST00000563854 KIAA0087Q14695 138 aa10.88□□□□□ -0.67
NME3-205ENST00000563854 KIAA1644Q3SXP7 199 aa10.88□□□□□ -0.67
NME3-205ENST00000563854 NXT2Q9NPJ8 142 aaKnown RBP10.88□□□□□ -0.67
NME3-205ENST00000563854 TOMM7Q9P0U1 55 aa10.88□□□□□ -0.67
NME3-205ENST00000563854 TLX1NBP0CAT3 122 aa10.87□□□□□ -0.67
NME3-205ENST00000563854 ADCYAP1P18509 176 aa10.87□□□□□ -0.67
NME3-205ENST00000563854 PACRGQ96M98 296 aaPredicted RBP10.87□□□□□ -0.67
NME3-205ENST00000563854 TNXBP22105 4242 aa10.87□□□□□ -0.67
NME3-205ENST00000563854 PRSS2P07478 247 aa10.86□□□□□ -0.67
NME3-205ENST00000563854 AMELXQ99217 191 aa10.86□□□□□ -0.67
NME3-205ENST00000563854 TRBV30A0A0K0K1B3 111 aa10.85□□□□□ -0.67
NME3-205ENST00000563854 K7EMI3 77 aa10.85□□□□□ -0.67
NME3-205ENST00000563854 TMEM218A2RU14 115 aa10.84□□□□□ -0.67
NME3-205ENST00000563854 IGIPA6NJ69 53 aa10.84□□□□□ -0.67
NME3-205ENST00000563854 UQCC3Q6UW78 93 aa10.84□□□□□ -0.67
NME3-205ENST00000563854 M0QXV9 152 aa10.83□□□□□ -0.68
NME3-205ENST00000563854 CKS1BP61024 79 aa10.83□□□□□ -0.68
NME3-205ENST00000563854 LINC01561Q8N1V8 128 aa10.83□□□□□ -0.68
NME3-205ENST00000563854 NDUFC2-KCTD14E9PQ53 114 aa10.82□□□□□ -0.68
NME3-205ENST00000563854 NPSP0C0P6 89 aa10.82□□□□□ -0.68
NME3-205ENST00000563854 S100PP25815 95 aa10.82□□□□□ -0.68
NME3-205ENST00000563854 KRTAP10-8P60410 259 aa10.82□□□□□ -0.68
NME3-205ENST00000563854 UBE2BP63146 152 aa10.82□□□□□ -0.68
NME3-205ENST00000563854 C6orf226Q5I0X4 101 aa10.82□□□□□ -0.68
NME3-205ENST00000563854 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
NME3-205ENST00000563854 KRTAP11-1Q8IUC1 163 aa10.82□□□□□ -0.68
NME3-205ENST00000563854 GEMIN7Q9H840 131 aaKnown RBP10.82□□□□□ -0.68
NME3-205ENST00000563854 IGLV7-43P04211 117 aa10.81□□□□□ -0.68
NME3-205ENST00000563854 G0S2P27469 103 aa10.81□□□□□ -0.68
NME3-205ENST00000563854 HERVK_113P63121 156 aa10.81□□□□□ -0.68
NME3-205ENST00000563854 IFITM2Q01629 132 aa10.81□□□□□ -0.68
NME3-205ENST00000563854 TOMM6Q96B49 74 aa10.81□□□□□ -0.68
NME3-205ENST00000563854 ALKBH7Q9BT30 221 aaPredicted RBP10.81□□□□□ -0.68
NME3-205ENST00000563854 LINC00469Q8N7U9 141 aa10.8□□□□□ -0.68
NME3-205ENST00000563854 SCGB3A1Q96QR1 104 aa10.8□□□□□ -0.68
NME3-205ENST00000563854 TIMM17AQ99595 171 aa10.8□□□□□ -0.68
NME3-205ENST00000563854 CDKN2A-AS1Q9UH64 79 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms