RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 PRR15LQ9BU68 103 aa2.35□□□□□ -2.03
GDE1-202ENST00000563645 TET2Q6N021 2002 aaPredicted RBP2.35□□□□□ -2.03
GDE1-202ENST00000563645 PI4KAP42356 2102 aa2.35□□□□□ -2.03
GDE1-202ENST00000563645 INTS1Q8N201 2190 aaKnown RBP2.34□□□□□ -2.03
GDE1-202ENST00000563645 LCE6AA0A183 80 aa2.34□□□□□ -2.03
GDE1-202ENST00000563645 CHTF8P0CG12 524 aa2.34□□□□□ -2.03
GDE1-202ENST00000563645 CMC4P56277 68 aaPredicted RBP2.34□□□□□ -2.03
GDE1-202ENST00000563645 PRR4Q16378 134 aa2.34□□□□□ -2.03
GDE1-202ENST00000563645 Q8N9L7 120 aa2.34□□□□□ -2.03
GDE1-202ENST00000563645 MUC4Q99102 2169 aa2.34□□□□□ -2.04
GDE1-202ENST00000563645 ZNF407Q9C0G0 2248 aa2.34□□□□□ -2.04
GDE1-202ENST00000563645 FREM3P0C091 2139 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 IGLV4-69A0A075B6H9 119 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 IGHV3OR16-8A0A075B7F1 116 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 IGHV3-43A0A0B4J1X8 118 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 A0A0J9YXY3 114 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 CXorf51AA0A1B0GTR3 108 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 KRTAP4-16G5E9R7 235 aaPredicted RBP2.33□□□□□ -2.04
GDE1-202ENST00000563645 M0R3E3 92 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 IGHV3-30-3P0DP02 117 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 ELOF1P60002 83 aaKnown RBP2.33□□□□□ -2.04
GDE1-202ENST00000563645 EGFEM1PQ0D2K5 195 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 CNEP1R1Q8N9A8 125 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 ZCCHC13Q8WW36 166 aaKnown RBP2.33□□□□□ -2.04
GDE1-202ENST00000563645 C14orf132Q9NPU4 83 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 NDUFA4L2Q9NRX3 87 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 PLAC8Q9NZF1 115 aa2.33□□□□□ -2.04
GDE1-202ENST00000563645 FREM1Q5H8C1 2179 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 TRAV12-3A0A0B4J271 114 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 TRBV6-5A0A0K0K1A5 114 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 A0A1W2PNM2 257 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 IGLV3-1P01715 115 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 CRPP02741 224 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 SAA2P0DJI9 122 aaPredicted RBP2.32□□□□□ -2.04
GDE1-202ENST00000563645 MIAQ16674 131 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 Q86TA4 180 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 Q8NAQ8 132 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 ZNF625Q96I27 306 aaPredicted RBP2.32□□□□□ -2.04
GDE1-202ENST00000563645 Q9BRP9 147 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 UBL5Q9BZL1 73 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 FGF23Q9GZV9 251 aaPredicted RBP2.32□□□□□ -2.04
GDE1-202ENST00000563645 CEP192Q8TEP8 1941 aa2.32□□□□□ -2.04
GDE1-202ENST00000563645 IGKV1D-42A0A075B6H8 117 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 IGHV7-81A0A0B4J1V7 117 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 TRAV21A0A0B4J279 112 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 CLPSL1A2RUU4 121 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 IGHV1-69P01742 117 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 CLPSP04118 112 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 P0C880 135 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 RNASE13Q5GAN3 156 aaKnown RBP2.31□□□□□ -2.04
GDE1-202ENST00000563645 PP632Q6XCG6 107 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 LYPD1Q8N2G4 141 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 LINC00467Q9BRT7 94 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 HIGD2AQ9BW72 106 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 SHANK1Q9Y566 2161 aa2.31□□□□□ -2.04
GDE1-202ENST00000563645 TNRC6BQ9UPQ9 1833 aaKnown RBP2.31□□□□□ -2.04
GDE1-202ENST00000563645 ARFGEF3Q5TH69 2177 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 MED12Q93074 2177 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 IGHV3-74A0A0B4J1X5 117 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 BPY2O14599 106 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 IGLV2-23P01705 113 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 IGLV3-25P01717 112 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 CRIP1P50238 77 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 CSAG1Q6PB30 78 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 LYPD2Q6UXB3 125 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 Q6ZQT0 140 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 CNFNQ9BYD5 112 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 LINC01558Q9Y6Z2 57 aa2.3□□□□□ -2.04
GDE1-202ENST00000563645 C17orf98A8MV24 154 aa2.29□□□□□ -2.04
GDE1-202ENST00000563645 A8MWP4 228 aa2.29□□□□□ -2.04
GDE1-202ENST00000563645 JMJD7-PLA2G4BH0Y9G9 81 aa2.29□□□□□ -2.04
GDE1-202ENST00000563645 LECT2O14960 151 aa2.29□□□□□ -2.04
GDE1-202ENST00000563645 PPP1R17O96001 155 aa2.29□□□□□ -2.04
GDE1-202ENST00000563645 IGHV3-11P01762 117 aa2.29□□□□□ -2.04
GDE1-202ENST00000563645 CNBPP62633 177 aaKnown RBP2.29□□□□□ -2.04
GDE1-202ENST00000563645 MIR22HGQ0VDD5 57 aa2.29□□□□□ -2.04
GDE1-202ENST00000563645 SMIM2Q9BVW6 85 aa2.29□□□□□ -2.04
GDE1-202ENST00000563645 MRPL36Q9P0J6 103 aaKnown RBP2.29□□□□□ -2.04
GDE1-202ENST00000563645 KLK12Q9UKR0 248 aa2.29□□□□□ -2.04
GDE1-202ENST00000563645 ZGRF1Q86YA3 2104 aa2.29□□□□□ -2.04
GDE1-202ENST00000563645 COL4A5P29400 1685 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 DNAJC13O75165 2243 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 DOCK10Q96BY6 2186 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 IGHV3-21A0A0B4J1V1 117 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 IGHV3-73A0A0B4J1V6 119 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 TRBV10-1A0A0K0K1A3 114 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 NCR3O14931 201 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 COX7A1P24310 79 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 CASC10Q5T4H9 136 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 MIR7-3HGQ8N6C7 128 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 MUC7Q8TAX7 377 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 SMIM14Q96QK8 99 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 C8orf17Q9NRJ1 99 aa2.28□□□□□ -2.04
GDE1-202ENST00000563645 A0A087WSZ3 146 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 H0YGX0 51 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 MSMBP08118 114 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 SPINK7P58062 85 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 NNATQ16517 81 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 PIGYQ3MUY2 71 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms