RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 IFITM10A6NMD0 228 aa11.94□□□□□ -0.5
CDH11-206ENST00000562998 LINC00173Q6ZV60 143 aa11.94□□□□□ -0.5
CDH11-206ENST00000562998 AMELXQ99217 191 aa11.94□□□□□ -0.5
CDH11-206ENST00000562998 FAM229AH3BQW9 127 aa11.93□□□□□ -0.5
CDH11-206ENST00000562998 FABP9Q0Z7S8 132 aa11.93□□□□□ -0.5
CDH11-206ENST00000562998 C5orf38Q86SI9 138 aa11.93□□□□□ -0.5
CDH11-206ENST00000562998 TOMM6Q96B49 74 aa11.93□□□□□ -0.5
CDH11-206ENST00000562998 LINC00526Q96FQ7 95 aa11.93□□□□□ -0.5
CDH11-206ENST00000562998 G0S2P27469 103 aa11.92□□□□□ -0.5
CDH11-206ENST00000562998 LINC00242Q5T6M2 205 aa11.92□□□□□ -0.5
CDH11-206ENST00000562998 PRSS3P2Q8NHM4 247 aa11.92□□□□□ -0.5
CDH11-206ENST00000562998 MALP21145 153 aa11.91□□□□□ -0.5
CDH11-206ENST00000562998 UBE2D1P51668 147 aa11.91□□□□□ -0.5
CDH11-206ENST00000562998 LINC00528Q8N1L1 170 aa11.91□□□□□ -0.5
CDH11-206ENST00000562998 TIMM17AQ99595 171 aa11.91□□□□□ -0.5
CDH11-206ENST00000562998 ZNF561-AS1K7EIQ3 104 aa11.9□□□□□ -0.5
CDH11-206ENST00000562998 TEX43Q6ZNM6 134 aa11.9□□□□□ -0.5
CDH11-206ENST00000562998 FAM19A3Q7Z5A8 133 aa11.9□□□□□ -0.5
CDH11-206ENST00000562998 SLC7A5P1Q8MH63 180 aa11.9□□□□□ -0.5
CDH11-206ENST00000562998 TRAPPC1Q9Y5R8 145 aa11.9□□□□□ -0.5
CDH11-206ENST00000562998 IGLV4-69A0A075B6H9 119 aa11.89□□□□□ -0.51
CDH11-206ENST00000562998 KRTAP10-4P60372 401 aaPredicted RBP11.89□□□□□ -0.51
CDH11-206ENST00000562998 COX6A2Q02221 97 aa11.89□□□□□ -0.51
CDH11-206ENST00000562998 ZC2HC1BQ5TFG8 222 aa11.89□□□□□ -0.51
CDH11-206ENST00000562998 SPACA4Q8TDM5 124 aa11.89□□□□□ -0.51
CDH11-206ENST00000562998 A0A087WZ39 114 aa11.88□□□□□ -0.51
CDH11-206ENST00000562998 APOMO95445 188 aa11.88□□□□□ -0.51
CDH11-206ENST00000562998 CHTF8P0CG12 524 aa11.88□□□□□ -0.51
CDH11-206ENST00000562998 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
CDH11-206ENST00000562998 OR10D4PQ8NGN7 298 aa11.88□□□□□ -0.51
CDH11-206ENST00000562998 C2orf48Q96LS8 159 aa11.88□□□□□ -0.51
CDH11-206ENST00000562998 CARD19Q96LW7 228 aa11.88□□□□□ -0.51
CDH11-206ENST00000562998 VCX2Q9H322 139 aa11.88□□□□□ -0.51
CDH11-206ENST00000562998 Q6ZN92 141 aa11.87□□□□□ -0.51
CDH11-206ENST00000562998 ERASQ7Z444 233 aa11.87□□□□□ -0.51
CDH11-206ENST00000562998 C18orf32Q8TCD1 76 aa11.87□□□□□ -0.51
CDH11-206ENST00000562998 URB1-AS1Q96HZ7 61 aa11.87□□□□□ -0.51
CDH11-206ENST00000562998 LINC01549A6NIU2 74 aa11.86□□□□□ -0.51
CDH11-206ENST00000562998 Q6ZRU5 148 aa11.86□□□□□ -0.51
CDH11-206ENST00000562998 C2orf88Q9BSF0 95 aa11.86□□□□□ -0.51
CDH11-206ENST00000562998 SPAG11BQ08648 103 aa11.85□□□□□ -0.51
CDH11-206ENST00000562998 PAPPA-AS1Q5QFB9 102 aa11.85□□□□□ -0.51
CDH11-206ENST00000562998 LINC01561Q8N1V8 128 aa11.85□□□□□ -0.51
CDH11-206ENST00000562998 A0A087WYN8 130 aa11.84□□□□□ -0.51
CDH11-206ENST00000562998 A0A096LNI7 61 aa11.84□□□□□ -0.51
CDH11-206ENST00000562998 A0A096LNJ9 63 aa11.84□□□□□ -0.51
CDH11-206ENST00000562998 PLA2G1BP04054 148 aaKnown RBP11.84□□□□□ -0.51
CDH11-206ENST00000562998 INAFM2P0DMQ5 153 aa11.84□□□□□ -0.51
CDH11-206ENST00000562998 FA2HQ7L5A8 372 aa11.84□□□□□ -0.51
CDH11-206ENST00000562998 SCGB3A1Q96QR1 104 aa11.84□□□□□ -0.51
CDH11-206ENST00000562998 PLAC8Q9NZF1 115 aa11.84□□□□□ -0.51
CDH11-206ENST00000562998 F8WDY8 70 aa11.83□□□□□ -0.52
CDH11-206ENST00000562998 KIAA0087Q14695 138 aa11.83□□□□□ -0.52
CDH11-206ENST00000562998 CBLN2Q8IUK8 224 aa11.83□□□□□ -0.52
CDH11-206ENST00000562998 ORAOV1Q8WV07 137 aa11.83□□□□□ -0.52
CDH11-206ENST00000562998 CAMK2N2Q96S95 79 aa11.83□□□□□ -0.52
CDH11-206ENST00000562998 SMCO4Q9NRQ5 59 aa11.83□□□□□ -0.52
CDH11-206ENST00000562998 RNF151Q2KHN1 245 aa11.82□□□□□ -0.52
CDH11-206ENST00000562998 PKIGQ9Y2B9 76 aa11.82□□□□□ -0.52
CDH11-206ENST00000562998 MYCBP2O75592 4640 aa11.81□□□□□ -0.52
CDH11-206ENST00000562998 LINC00614P0C842 121 aa11.81□□□□□ -0.52
CDH11-206ENST00000562998 MRPL35Q9NZE8 188 aaKnown RBP11.8□□□□□ -0.52
CDH11-206ENST00000562998 IGKV2-24A0A0C4DH68 120 aa11.79□□□□□ -0.52
CDH11-206ENST00000562998 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.79□□□□□ -0.52
CDH11-206ENST00000562998 HERVK_113P63121 156 aa11.79□□□□□ -0.52
CDH11-206ENST00000562998 SEC11AP67812 179 aa11.79□□□□□ -0.52
CDH11-206ENST00000562998 LINC00474Q9P2X8 69 aa11.79□□□□□ -0.52
CDH11-206ENST00000562998 LOC107984640A0A0U1RRK4 108 aa11.78□□□□□ -0.52
CDH11-206ENST00000562998 PTTG1IPP53801 180 aa11.78□□□□□ -0.52
CDH11-206ENST00000562998 MAJINQ3KP22 176 aa11.78□□□□□ -0.52
CDH11-206ENST00000562998 C10orf25Q5T742 122 aa11.78□□□□□ -0.52
CDH11-206ENST00000562998 CST9LQ9H4G1 147 aa11.78□□□□□ -0.52
CDH11-206ENST00000562998 FLG2Q5D862 2391 aaPredicted RBP11.78□□□□□ -0.52
CDH11-206ENST00000562998 A0A0J9YXV3 536 aa11.77□□□□□ -0.53
CDH11-206ENST00000562998 DPH3Q96FX2 82 aa11.77□□□□□ -0.53
CDH11-206ENST00000562998 CDKN2A-AS1Q9UH64 79 aa11.77□□□□□ -0.53
CDH11-206ENST00000562998 IGLV5-45A0A087WSX0 123 aa11.76□□□□□ -0.53
CDH11-206ENST00000562998 NDUFA1O15239 70 aa11.76□□□□□ -0.53
CDH11-206ENST00000562998 PDZD11Q5EBL8 140 aa11.76□□□□□ -0.53
CDH11-206ENST00000562998 UNQ6190/PRO20217Q6UXQ8 127 aa11.76□□□□□ -0.53
CDH11-206ENST00000562998 TINCRA0A1B0GVN0 87 aa11.75□□□□□ -0.53
CDH11-206ENST00000562998 RAB5BP61020 215 aa11.75□□□□□ -0.53
CDH11-206ENST00000562998 PMVKQ15126 192 aa11.75□□□□□ -0.53
CDH11-206ENST00000562998 STPG4Q8N801 248 aa11.75□□□□□ -0.53
CDH11-206ENST00000562998 C6orf48Q9UBA6 75 aa11.75□□□□□ -0.53
CDH11-206ENST00000562998 PKHD1L1Q86WI1 4243 aa11.74□□□□□ -0.53
CDH11-206ENST00000562998 HBDP02042 147 aa11.74□□□□□ -0.53
CDH11-206ENST00000562998 TLX1NBP0CAT3 122 aa11.74□□□□□ -0.53
CDH11-206ENST00000562998 RPL37AP61513 92 aaKnown RBP11.74□□□□□ -0.53
CDH11-206ENST00000562998 PMCHL1Q16048 86 aa11.73□□□□□ -0.53
CDH11-206ENST00000562998 GEMIN7Q9H840 131 aaKnown RBP11.73□□□□□ -0.53
CDH11-206ENST00000562998 GAGE2BQ13066 116 aa11.72□□□□□ -0.53
CDH11-206ENST00000562998 C2orf82Q6UX34 121 aa11.72□□□□□ -0.53
CDH11-206ENST00000562998 Q8IZM0 81 aa11.72□□□□□ -0.53
CDH11-206ENST00000562998 TRBV30A0A0K0K1B3 111 aa11.71□□□□□ -0.53
CDH11-206ENST00000562998 COLCA2A8K830 154 aa11.71□□□□□ -0.53
CDH11-206ENST00000562998 TRGC2P03986 189 aa11.71□□□□□ -0.53
CDH11-206ENST00000562998 CHCHD1Q96BP2 118 aaKnown RBP11.71□□□□□ -0.53
CDH11-206ENST00000562998 SMIM1B2RUZ4 78 aa11.7□□□□□ -0.54
CDH11-206ENST00000562998 A0A1W2PNN7 141 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms