RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 IFITM10A6NMD0 228 aa7.91□□□□□ -1.14
SF3B3-202ENST00000562722 TCAPO15273 167 aa7.91□□□□□ -1.14
SF3B3-202ENST00000562722 SRP19P09132 144 aaKnown RBP7.91□□□□□ -1.14
SF3B3-202ENST00000562722 ADIRFQ15847 76 aa7.91□□□□□ -1.14
SF3B3-202ENST00000562722 GAGE2EQ4V326 116 aa7.91□□□□□ -1.14
SF3B3-202ENST00000562722 GAGE2DQ9UEU5 116 aa7.91□□□□□ -1.14
SF3B3-202ENST00000562722 LINC00862A6NCI5 91 aa7.9□□□□□ -1.14
SF3B3-202ENST00000562722 F8WDY8 70 aa7.9□□□□□ -1.14
SF3B3-202ENST00000562722 HBBP68871 147 aa7.9□□□□□ -1.14
SF3B3-202ENST00000562722 TMEM241Q24JQ0 296 aa7.9□□□□□ -1.14
SF3B3-202ENST00000562722 SPANXA1Q9NS26 97 aa7.9□□□□□ -1.14
SF3B3-202ENST00000562722 hCG_2014768A0A024R1R8 64 aa7.89□□□□□ -1.15
SF3B3-202ENST00000562722 TNFRSF6BO95407 300 aa7.89□□□□□ -1.15
SF3B3-202ENST00000562722 UBE2BP63146 152 aa7.89□□□□□ -1.15
SF3B3-202ENST00000562722 FAM74A3Q4VXF1 159 aa7.89□□□□□ -1.15
SF3B3-202ENST00000562722 C10orf25Q5T742 122 aa7.89□□□□□ -1.15
SF3B3-202ENST00000562722 UNQ6190/PRO20217Q6UXQ8 127 aa7.89□□□□□ -1.15
SF3B3-202ENST00000562722 SMIM2Q9BVW6 85 aa7.89□□□□□ -1.15
SF3B3-202ENST00000562722 TRBV24-1A0A075B6N3 115 aa7.88□□□□□ -1.15
SF3B3-202ENST00000562722 TGIF2-C20orf24A0A0A6YYL0 155 aa7.88□□□□□ -1.15
SF3B3-202ENST00000562722 IGHV3OR16-9A0A0B4J2B5 98 aa7.88□□□□□ -1.15
SF3B3-202ENST00000562722 A0A1B0GW15 77 aa7.88□□□□□ -1.15
SF3B3-202ENST00000562722 D6R8Y8 96 aa7.88□□□□□ -1.15
SF3B3-202ENST00000562722 H0Y9J4 135 aa7.88□□□□□ -1.15
SF3B3-202ENST00000562722 RPL23P62829 140 aaKnown RBP7.88□□□□□ -1.15
SF3B3-202ENST00000562722 C6orf48Q9UBA6 75 aa7.88□□□□□ -1.15
SF3B3-202ENST00000562722 SMIM27A0A1W2PRY6 76 aa7.87□□□□□ -1.15
SF3B3-202ENST00000562722 F8W036 122 aa7.87□□□□□ -1.15
SF3B3-202ENST00000562722 M0QXV9 152 aa7.87□□□□□ -1.15
SF3B3-202ENST00000562722 UBE2D1P51668 147 aa7.87□□□□□ -1.15
SF3B3-202ENST00000562722 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
SF3B3-202ENST00000562722 MRPL54Q6P161 138 aaKnown RBP7.87□□□□□ -1.15
SF3B3-202ENST00000562722 KRTAP11-1Q8IUC1 163 aa7.87□□□□□ -1.15
SF3B3-202ENST00000562722 S100A8P05109 93 aa7.86□□□□□ -1.15
SF3B3-202ENST00000562722 TLX1NBP0CAT3 122 aa7.86□□□□□ -1.15
SF3B3-202ENST00000562722 RAB5AP20339 215 aa7.86□□□□□ -1.15
SF3B3-202ENST00000562722 MRPS36P82909 103 aaKnown RBP7.86□□□□□ -1.15
SF3B3-202ENST00000562722 SMDT1Q9H4I9 107 aa7.86□□□□□ -1.15
SF3B3-202ENST00000562722 NAT8Q9UHE5 227 aa7.86□□□□□ -1.15
SF3B3-202ENST00000562722 IGLV1-50A0A075B6I6 118 aa7.85□□□□□ -1.15
SF3B3-202ENST00000562722 NPYP01303 97 aa7.85□□□□□ -1.15
SF3B3-202ENST00000562722 IFI27P40305 119 aaPredicted RBP7.85□□□□□ -1.15
SF3B3-202ENST00000562722 FAM104AQ969W3 186 aa7.85□□□□□ -1.15
SF3B3-202ENST00000562722 PACRGQ96M98 296 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-202ENST00000562722 TRBV30A0A0K0K1B3 111 aa7.83□□□□□ -1.16
SF3B3-202ENST00000562722 PRR4Q16378 134 aa7.83□□□□□ -1.16
SF3B3-202ENST00000562722 NDUFC2-KCTD14E9PQ53 114 aa7.82□□□□□ -1.16
SF3B3-202ENST00000562722 PPBPP02775 128 aa7.82□□□□□ -1.16
SF3B3-202ENST00000562722 C2orf82Q6UX34 121 aa7.82□□□□□ -1.16
SF3B3-202ENST00000562722 ORMDL3Q8N138 153 aa7.82□□□□□ -1.16
SF3B3-202ENST00000562722 C9JQL5 133 aa7.81□□□□□ -1.16
SF3B3-202ENST00000562722 KRTAP1-4P0C5Y4 121 aa7.81□□□□□ -1.16
SF3B3-202ENST00000562722 RPL13AP40429 203 aaKnown RBP7.81□□□□□ -1.16
SF3B3-202ENST00000562722 KIAA0087Q14695 138 aa7.81□□□□□ -1.16
SF3B3-202ENST00000562722 PEA15Q15121 130 aa7.81□□□□□ -1.16
SF3B3-202ENST00000562722 LINC00242Q5T6M2 205 aa7.81□□□□□ -1.16
SF3B3-202ENST00000562722 TMEM136Q6ZRR5 245 aa7.81□□□□□ -1.16
SF3B3-202ENST00000562722 KRTAP7-1Q8IUC3 87 aa7.81□□□□□ -1.16
SF3B3-202ENST00000562722 TMEM141Q96I45 108 aa7.81□□□□□ -1.16
SF3B3-202ENST00000562722 PRELID3AQ96N28 172 aa7.81□□□□□ -1.16
SF3B3-202ENST00000562722 C2orf88Q9BSF0 95 aa7.81□□□□□ -1.16
SF3B3-202ENST00000562722 IGLV4-3A0A075B6K6 122 aa7.8□□□□□ -1.16
SF3B3-202ENST00000562722 A0A1B0GXF2 115 aa7.8□□□□□ -1.16
SF3B3-202ENST00000562722 PRSS2P07478 247 aa7.8□□□□□ -1.16
SF3B3-202ENST00000562722 C9orf129Q5T035 196 aaKnown RBP7.8□□□□□ -1.16
SF3B3-202ENST00000562722 TEX43Q6ZNM6 134 aa7.8□□□□□ -1.16
SF3B3-202ENST00000562722 LOC389332A0A1B0GUA5 103 aa7.79□□□□□ -1.16
SF3B3-202ENST00000562722 CKS1BP61024 79 aa7.79□□□□□ -1.16
SF3B3-202ENST00000562722 SRSF3P84103 164 aaKnown RBP7.79□□□□□ -1.16
SF3B3-202ENST00000562722 Q6ZN92 141 aa7.79□□□□□ -1.16
SF3B3-202ENST00000562722 TOMM7Q9P0U1 55 aa7.79□□□□□ -1.16
SF3B3-202ENST00000562722 PYGO1Q9Y3Y4 419 aa7.79□□□□□ -1.16
SF3B3-202ENST00000562722 LINC00469Q8N7U9 141 aa7.78□□□□□ -1.16
SF3B3-202ENST00000562722 ZC2HC1BQ5TFG8 222 aa7.77□□□□□ -1.17
SF3B3-202ENST00000562722 ATP5L2Q7Z4Y8 100 aa7.77□□□□□ -1.17
SF3B3-202ENST00000562722 MAP1LC3AQ9H492 121 aa7.77□□□□□ -1.17
SF3B3-202ENST00000562722 CYSLTR1Q9Y271 337 aa7.77□□□□□ -1.17
SF3B3-202ENST00000562722 MUC2Q02817 5179 aa7.76□□□□□ -1.17
SF3B3-202ENST00000562722 ZNF861PO60384 105 aa7.76□□□□□ -1.17
SF3B3-202ENST00000562722 C6orf226Q5I0X4 101 aa7.76□□□□□ -1.17
SF3B3-202ENST00000562722 LINC01561Q8N1V8 128 aa7.76□□□□□ -1.17
SF3B3-202ENST00000562722 VCX2Q9H322 139 aa7.76□□□□□ -1.17
SF3B3-202ENST00000562722 CARHSP1Q9Y2V2 147 aaKnown RBP7.76□□□□□ -1.17
SF3B3-202ENST00000562722 TSPAN13O95857 204 aa7.75□□□□□ -1.17
SF3B3-202ENST00000562722 LBHQ53QV2 105 aaPredicted RBP7.75□□□□□ -1.17
SF3B3-202ENST00000562722 C2orf66Q6UXQ4 117 aa7.75□□□□□ -1.17
SF3B3-202ENST00000562722 XAGE1AQ9HD64 81 aa7.75□□□□□ -1.17
SF3B3-202ENST00000562722 C22orf24Q9Y442 160 aa7.75□□□□□ -1.17
SF3B3-202ENST00000562722 NUPR1O60356 82 aa7.74□□□□□ -1.17
SF3B3-202ENST00000562722 ALKBH7Q9BT30 221 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-202ENST00000562722 CTDSP1Q9GZU7 261 aa7.74□□□□□ -1.17
SF3B3-202ENST00000562722 LAMTOR2Q9Y2Q5 125 aa7.74□□□□□ -1.17
SF3B3-202ENST00000562722 A0A0U1RQV1 116 aa7.73□□□□□ -1.17
SF3B3-202ENST00000562722 ORMDL2Q53FV1 153 aa7.73□□□□□ -1.17
SF3B3-202ENST00000562722 Q8IZM0 81 aa7.73□□□□□ -1.17
SF3B3-202ENST00000562722 Q8N8P6 123 aa7.73□□□□□ -1.17
SF3B3-202ENST00000562722 LINC00173Q6ZV60 143 aa7.72□□□□□ -1.17
SF3B3-202ENST00000562722 AMELXQ99217 191 aa7.72□□□□□ -1.17
SF3B3-202ENST00000562722 PRSS47A8MTI9 375 aa7.71□□□□□ -1.18
SF3B3-202ENST00000562722 RPL28P46779 137 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms