RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 MRPS36P82909 103 aaKnown RBP8.21□□□□□ -1.09
RPAP1-204ENST00000562303 PLXNB3Q9ULL4 1909 aa8.2□□□□□ -1.1
RPAP1-204ENST00000562303 FAM30AQ9NZY2 134 aa8.2□□□□□ -1.1
RPAP1-204ENST00000562303 MRPS12O15235 138 aaKnown RBP8.2□□□□□ -1.1
RPAP1-204ENST00000562303 A6NED7 52 aa8.2□□□□□ -1.1
RPAP1-204ENST00000562303 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.2□□□□□ -1.1
RPAP1-204ENST00000562303 Q8IZM0 81 aa8.2□□□□□ -1.1
RPAP1-204ENST00000562303 TP73-AS1Q9UF72 201 aa8.2□□□□□ -1.1
RPAP1-204ENST00000562303 BRI3O95415 125 aa8.19□□□□□ -1.1
RPAP1-204ENST00000562303 IGLV2-11P01706 119 aa8.19□□□□□ -1.1
RPAP1-204ENST00000562303 NRACQ8N912 160 aa8.19□□□□□ -1.1
RPAP1-204ENST00000562303 A0A0U1RQV1 116 aa8.19□□□□□ -1.1
RPAP1-204ENST00000562303 C11orf21Q9P2W6 132 aa8.19□□□□□ -1.1
RPAP1-204ENST00000562303 ANKHD1Q8IWZ3 2542 aaKnown RBP8.19□□□□□ -1.1
RPAP1-204ENST00000562303 DSCAMO60469 2012 aa8.18□□□□□ -1.1
RPAP1-204ENST00000562303 C6orf223Q8N319 242 aa8.18□□□□□ -1.1
RPAP1-204ENST00000562303 ESRGQ1W209 222 aa8.18□□□□□ -1.1
RPAP1-204ENST00000562303 CDC42SE2Q9NRR3 84 aa8.18□□□□□ -1.1
RPAP1-204ENST00000562303 NDUFC1O43677 76 aa8.18□□□□□ -1.1
RPAP1-204ENST00000562303 LST1O00453 97 aa8.17□□□□□ -1.1
RPAP1-204ENST00000562303 AVPP01185 164 aa8.17□□□□□ -1.1
RPAP1-204ENST00000562303 ATP5EP56381 51 aaPredicted RBP8.17□□□□□ -1.1
RPAP1-204ENST00000562303 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
RPAP1-204ENST00000562303 CRIP3Q6Q6R5 217 aa8.17□□□□□ -1.1
RPAP1-204ENST00000562303 UNQ6190/PRO20217Q6UXQ8 127 aa8.17□□□□□ -1.1
RPAP1-204ENST00000562303 PRR14LQ5THK1 2151 aa8.17□□□□□ -1.1
RPAP1-204ENST00000562303 MUC7Q8TAX7 377 aa8.17□□□□□ -1.1
RPAP1-204ENST00000562303 PRO3102Q9H379 93 aa8.17□□□□□ -1.1
RPAP1-204ENST00000562303 KRTAP10-9P60411 292 aa8.17□□□□□ -1.1
RPAP1-204ENST00000562303 X6R8D5 127 aa8.17□□□□□ -1.1
RPAP1-204ENST00000562303 SERP2Q8N6R1 65 aa8.16□□□□□ -1.1
RPAP1-204ENST00000562303 COL4A3Q01955 1670 aa8.16□□□□□ -1.1
RPAP1-204ENST00000562303 TTC28Q96AY4 2481 aa8.16□□□□□ -1.1
RPAP1-204ENST00000562303 ARHGAP21Q5T5U3 1957 aa8.16□□□□□ -1.1
RPAP1-204ENST00000562303 C2orf16Q68DN1 1984 aa8.16□□□□□ -1.1
RPAP1-204ENST00000562303 POLR2KP53803 58 aaKnown RBP8.16□□□□□ -1.1
RPAP1-204ENST00000562303 EGFEM1PQ0D2K5 195 aa8.16□□□□□ -1.1
RPAP1-204ENST00000562303 RETNLBQ9BQ08 111 aa8.16□□□□□ -1.1
RPAP1-204ENST00000562303 CDSNQ15517 529 aa8.15□□□□□ -1.1
RPAP1-204ENST00000562303 FREM1Q5H8C1 2179 aa8.15□□□□□ -1.1
RPAP1-204ENST00000562303 ODF3L2Q3SX64 289 aa8.15□□□□□ -1.1
RPAP1-204ENST00000562303 LINC01556Q5JQF7 62 aa8.15□□□□□ -1.1
RPAP1-204ENST00000562303 C1orf137Q5JT78 98 aa8.15□□□□□ -1.1
RPAP1-204ENST00000562303 CACNA1AO00555 2505 aa8.15□□□□□ -1.1
RPAP1-204ENST00000562303 Q6ZTC4 211 aa8.15□□□□□ -1.11
RPAP1-204ENST00000562303 HIVEP3Q5T1R4 2406 aa8.15□□□□□ -1.11
RPAP1-204ENST00000562303 IGHV6-1A0A0B4J1U7 121 aa8.14□□□□□ -1.11
RPAP1-204ENST00000562303 C1orf134Q5TEV5 83 aa8.14□□□□□ -1.11
RPAP1-204ENST00000562303 PRYO14603 147 aa8.14□□□□□ -1.11
RPAP1-204ENST00000562303 POM121L12Q8N7R1 296 aa8.14□□□□□ -1.11
RPAP1-204ENST00000562303 EDN2P20800 178 aa8.14□□□□□ -1.11
RPAP1-204ENST00000562303 CELA1Q9UNI1 258 aa8.14□□□□□ -1.11
RPAP1-204ENST00000562303 C9orf116Q5BN46 136 aaPredicted RBP8.14□□□□□ -1.11
RPAP1-204ENST00000562303 CHCHD7Q9BUK0 85 aa8.14□□□□□ -1.11
RPAP1-204ENST00000562303 ZNF106Q9H2Y7 1883 aaKnown RBP8.14□□□□□ -1.11
RPAP1-204ENST00000562303 IGLV1-51P01701 117 aa8.13□□□□□ -1.11
RPAP1-204ENST00000562303 TRBV10-3A0A0K0K1G6 114 aa8.12□□□□□ -1.11
RPAP1-204ENST00000562303 NTM-AS1Q6ZSK4 140 aa8.12□□□□□ -1.11
RPAP1-204ENST00000562303 MED12LQ86YW9 2145 aa8.12□□□□□ -1.11
RPAP1-204ENST00000562303 GAS8-AS1O95177 125 aa8.11□□□□□ -1.11
RPAP1-204ENST00000562303 LINC00242Q5T6M2 205 aa8.11□□□□□ -1.11
RPAP1-204ENST00000562303 ALPK3Q96L96 1907 aa8.1□□□□□ -1.11
RPAP1-204ENST00000562303 LINC00208Q96KT6 92 aa8.09□□□□□ -1.11
RPAP1-204ENST00000562303 Q9BRP9 147 aa8.09□□□□□ -1.11
RPAP1-204ENST00000562303 IMUPQ9GZP8 106 aa8.09□□□□□ -1.11
RPAP1-204ENST00000562303 CRIP2P52943 208 aaPredicted RBP8.09□□□□□ -1.11
RPAP1-204ENST00000562303 IGLV4-60A0A075B6I1 120 aa8.08□□□□□ -1.12
RPAP1-204ENST00000562303 SPINK1P00995 79 aa8.08□□□□□ -1.12
RPAP1-204ENST00000562303 FHL2Q14192 279 aa8.08□□□□□ -1.12
RPAP1-204ENST00000562303 COX6A2Q02221 97 aa8.08□□□□□ -1.12
RPAP1-204ENST00000562303 Q6JHZ5 121 aa8.08□□□□□ -1.12
RPAP1-204ENST00000562303 TRBV7-6A0A0J9YX20 115 aa8.08□□□□□ -1.12
RPAP1-204ENST00000562303 C16orf95Q9H693 158 aa8.08□□□□□ -1.12
RPAP1-204ENST00000562303 PRR3P79522 188 aaKnown RBP8.08□□□□□ -1.12
RPAP1-204ENST00000562303 Q8N814 137 aa8.07□□□□□ -1.12
RPAP1-204ENST00000562303 SMIM1B2RUZ4 78 aa8.07□□□□□ -1.12
RPAP1-204ENST00000562303 IGIPA6NJ69 53 aa8.06□□□□□ -1.12
RPAP1-204ENST00000562303 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
RPAP1-204ENST00000562303 Q6Q795 121 aa8.06□□□□□ -1.12
RPAP1-204ENST00000562303 COX7CP15954 63 aa8.05□□□□□ -1.12
RPAP1-204ENST00000562303 C2orf91Q6ZV80 131 aa8.05□□□□□ -1.12
RPAP1-204ENST00000562303 NAV2Q8IVL1 2488 aa8.05□□□□□ -1.12
RPAP1-204ENST00000562303 C2orf48Q96LS8 159 aa8.05□□□□□ -1.12
RPAP1-204ENST00000562303 KIAA1549Q9HCM3 1950 aa8.05□□□□□ -1.12
RPAP1-204ENST00000562303 LINC00694P0DN24 101 aa8.05□□□□□ -1.12
RPAP1-204ENST00000562303 MYO18BQ8IUG5 2567 aa8.05□□□□□ -1.12
RPAP1-204ENST00000562303 LTBP2Q14767 1821 aa8.04□□□□□ -1.12
RPAP1-204ENST00000562303 PRRC2AP48634 2157 aaKnown RBP8.04□□□□□ -1.12
RPAP1-204ENST00000562303 PCOTHQ58A44 107 aa8.04□□□□□ -1.12
RPAP1-204ENST00000562303 NAV3Q8IVL0 2385 aa8.04□□□□□ -1.12
RPAP1-204ENST00000562303 DOPEY1Q5JWR5 2465 aa8.04□□□□□ -1.12
RPAP1-204ENST00000562303 LYPD5Q6UWN5 251 aa8.03□□□□□ -1.12
RPAP1-204ENST00000562303 NHLRC4P0CG21 123 aaPredicted RBP8.03□□□□□ -1.12
RPAP1-204ENST00000562303 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
RPAP1-204ENST00000562303 CNFNQ9BYD5 112 aa8.03□□□□□ -1.12
RPAP1-204ENST00000562303 A0A087WSZ3 146 aa8.03□□□□□ -1.12
RPAP1-204ENST00000562303 F8WDY8 70 aa8.03□□□□□ -1.12
RPAP1-204ENST00000562303 A0A087WYN8 130 aa8.03□□□□□ -1.12
RPAP1-204ENST00000562303 LIMD2Q9BT23 127 aa8.03□□□□□ -1.12
RPAP1-204ENST00000562303 COL4A4P53420 1690 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms