RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.7□□□□□ -1.02
CDH1-204ENST00000562118 IGHV1-58A0A0C4DH39 117 aa8.7□□□□□ -1.02
CDH1-204ENST00000562118 LINC00310P59036 64 aa8.7□□□□□ -1.02
CDH1-204ENST00000562118 PAPPA-AS1Q5QFB9 102 aa8.7□□□□□ -1.02
CDH1-204ENST00000562118 HBDP02042 147 aa8.69□□□□□ -1.02
CDH1-204ENST00000562118 S100A1P23297 94 aa8.69□□□□□ -1.02
CDH1-204ENST00000562118 Q6ZN92 141 aa8.69□□□□□ -1.02
CDH1-204ENST00000562118 LINC01561Q8N1V8 128 aa8.69□□□□□ -1.02
CDH1-204ENST00000562118 C9orf163Q8N9P6 203 aa8.69□□□□□ -1.02
CDH1-204ENST00000562118 A0A087WZ39 114 aa8.68□□□□□ -1.02
CDH1-204ENST00000562118 COX7A2LO14548 114 aa8.68□□□□□ -1.02
CDH1-204ENST00000562118 ATP6V1G1O75348 118 aa8.68□□□□□ -1.02
CDH1-204ENST00000562118 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
CDH1-204ENST00000562118 C2orf88Q9BSF0 95 aa8.68□□□□□ -1.02
CDH1-204ENST00000562118 VCX2Q9H322 139 aa8.68□□□□□ -1.02
CDH1-204ENST00000562118 hDV102S1A0JD36 115 aa8.67□□□□□ -1.02
CDH1-204ENST00000562118 COX6A2Q02221 97 aa8.67□□□□□ -1.02
CDH1-204ENST00000562118 ZC2HC1BQ5TFG8 222 aa8.67□□□□□ -1.02
CDH1-204ENST00000562118 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
CDH1-204ENST00000562118 XGP55808 180 aa8.66□□□□□ -1.02
CDH1-204ENST00000562118 OR10D4PQ8NGN7 298 aa8.66□□□□□ -1.02
CDH1-204ENST00000562118 CST9LQ9H4G1 147 aa8.66□□□□□ -1.02
CDH1-204ENST00000562118 FAT1Q14517 4588 aa8.66□□□□□ -1.02
CDH1-204ENST00000562118 VPS13BQ7Z7G8 4022 aa8.65□□□□□ -1.02
CDH1-204ENST00000562118 IGHV3-64A0A075B6Q5 118 aa8.65□□□□□ -1.02
CDH1-204ENST00000562118 PMVKQ15126 192 aa8.65□□□□□ -1.02
CDH1-204ENST00000562118 PMCHL1Q16048 86 aa8.65□□□□□ -1.02
CDH1-204ENST00000562118 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.02
CDH1-204ENST00000562118 TINCRA0A1B0GVN0 87 aa8.64□□□□□ -1.03
CDH1-204ENST00000562118 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.64□□□□□ -1.03
CDH1-204ENST00000562118 HERVK_113P63121 156 aa8.64□□□□□ -1.03
CDH1-204ENST00000562118 SEC11AP67812 179 aa8.64□□□□□ -1.03
CDH1-204ENST00000562118 CIRBPQ14011 172 aaKnown RBP8.64□□□□□ -1.03
CDH1-204ENST00000562118 HIGD2BQ4VC39 106 aa8.64□□□□□ -1.03
CDH1-204ENST00000562118 SDIM1Q6ZPB5 146 aa8.64□□□□□ -1.03
CDH1-204ENST00000562118 C5orf38Q86SI9 138 aa8.64□□□□□ -1.03
CDH1-204ENST00000562118 C2orf48Q96LS8 159 aa8.64□□□□□ -1.03
CDH1-204ENST00000562118 F8WDY8 70 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 HIST1H2BKO60814 126 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 ATP5LO75964 103 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 APOMO95445 188 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 HIST1H2BJP06899 126 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 HIST1H2BOP23527 126 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 HIST1H2BBP33778 126 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 HIST1H2BDP58876 126 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 HIST1H2BCP62807 126 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 KIAA0087Q14695 138 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 HIST2H2BEQ16778 126 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.63□□□□□ -1.03
CDH1-204ENST00000562118 HIST1H2BHQ93079 126 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 HIST1H2BNQ99877 126 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 HIST1H2BMQ99879 126 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 KRTAP17-1Q9BYP8 105 aa8.63□□□□□ -1.03
CDH1-204ENST00000562118 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.62□□□□□ -1.03
CDH1-204ENST00000562118 SERF1AO75920 110 aa8.62□□□□□ -1.03
CDH1-204ENST00000562118 IGLC3P0DOY3 106 aa8.62□□□□□ -1.03
CDH1-204ENST00000562118 LINC01620Q4KN68 170 aa8.62□□□□□ -1.03
CDH1-204ENST00000562118 IGLV4-69A0A075B6H9 119 aa8.61□□□□□ -1.03
CDH1-204ENST00000562118 A0A0J9YXV3 536 aa8.61□□□□□ -1.03
CDH1-204ENST00000562118 NUPR1O60356 82 aa8.61□□□□□ -1.03
CDH1-204ENST00000562118 MALP21145 153 aa8.61□□□□□ -1.03
CDH1-204ENST00000562118 COA6Q5JTJ3 125 aaKnown RBP8.61□□□□□ -1.03
CDH1-204ENST00000562118 BAGE3Q86Y29 109 aa8.61□□□□□ -1.03
CDH1-204ENST00000562118 TRAV12-1A0A0B4J245 112 aa8.6□□□□□ -1.03
CDH1-204ENST00000562118 HSBP1O75506 76 aa8.6□□□□□ -1.03
CDH1-204ENST00000562118 SPAG11BQ08648 103 aa8.6□□□□□ -1.03
CDH1-204ENST00000562118 CDKN2A-AS1Q9UH64 79 aa8.6□□□□□ -1.03
CDH1-204ENST00000562118 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.03
CDH1-204ENST00000562118 RNF151Q2KHN1 245 aa8.59□□□□□ -1.03
CDH1-204ENST00000562118 ORAOV1Q8WV07 137 aa8.59□□□□□ -1.03
CDH1-204ENST00000562118 LINC00526Q96FQ7 95 aa8.59□□□□□ -1.03
CDH1-204ENST00000562118 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
CDH1-204ENST00000562118 SMIM1B2RUZ4 78 aa8.58□□□□□ -1.04
CDH1-204ENST00000562118 SYCNQ0VAF6 134 aa8.58□□□□□ -1.04
CDH1-204ENST00000562118 Q6ZRU5 148 aa8.58□□□□□ -1.04
CDH1-204ENST00000562118 FAM19A2Q8N3H0 131 aa8.58□□□□□ -1.04
CDH1-204ENST00000562118 IFI27L1Q96BM0 104 aa8.58□□□□□ -1.04
CDH1-204ENST00000562118 CHAC1Q9BUX1 264 aa8.58□□□□□ -1.04
CDH1-204ENST00000562118 MRPL35Q9NZE8 188 aaKnown RBP8.58□□□□□ -1.04
CDH1-204ENST00000562118 EPM2AB3EWF7 344 aa8.57□□□□□ -1.04
CDH1-204ENST00000562118 PANO1I0J062 215 aa8.57□□□□□ -1.04
CDH1-204ENST00000562118 Q8IZM0 81 aa8.57□□□□□ -1.04
CDH1-204ENST00000562118 SPACA4Q8TDM5 124 aa8.57□□□□□ -1.04
CDH1-204ENST00000562118 PACRGQ96M98 296 aaPredicted RBP8.57□□□□□ -1.04
CDH1-204ENST00000562118 GEMIN7Q9H840 131 aaKnown RBP8.57□□□□□ -1.04
CDH1-204ENST00000562118 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.57□□□□□ -1.04
CDH1-204ENST00000562118 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
CDH1-204ENST00000562118 IGLV5-39A0A0G2JS06 123 aa8.56□□□□□ -1.04
CDH1-204ENST00000562118 TLX1NBP0CAT3 122 aa8.56□□□□□ -1.04
CDH1-204ENST00000562118 SCXQ7RTU7 201 aa8.56□□□□□ -1.04
CDH1-204ENST00000562118 LEPROTL1O95214 131 aa8.55□□□□□ -1.04
CDH1-204ENST00000562118 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
CDH1-204ENST00000562118 Q8N1X5 172 aa8.55□□□□□ -1.04
CDH1-204ENST00000562118 LINC00469Q8N7U9 141 aa8.55□□□□□ -1.04
CDH1-204ENST00000562118 CAMK2N2Q96S95 79 aa8.55□□□□□ -1.04
CDH1-204ENST00000562118 PKIGQ9Y2B9 76 aa8.55□□□□□ -1.04
CDH1-204ENST00000562118 C11orf86A6NJI1 115 aa8.54□□□□□ -1.04
CDH1-204ENST00000562118 NDUFA1O15239 70 aa8.54□□□□□ -1.04
CDH1-204ENST00000562118 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
CDH1-204ENST00000562118 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms