RNA–Protein interactions for RNA: ENST00000561898.1

NPTN-203, Transcript of neuroplastin, humanhuman

TSL 2

Gene NPTN, Length 447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-203ENST00000561898 TMEM170BQ5T4T1 132 aa-0.61□□□□□ -2.51
NPTN-203ENST00000561898 SPAG11AQ6PDA7 123 aa-0.61□□□□□ -2.51
NPTN-203ENST00000561898 AGPAT4-IT1Q9H0P7 198 aa-0.61□□□□□ -2.51
NPTN-203ENST00000561898 GCN1Q92616 2671 aaKnown RBP-0.61□□□□□ -2.51
NPTN-203ENST00000561898 SIPA1L3O60292 1781 aaPredicted RBP-0.61□□□□□ -2.51
NPTN-203ENST00000561898 LRRK2Q5S007 2527 aa-0.61□□□□□ -2.51
NPTN-203ENST00000561898 COL6A5A8TX70 2615 aa-0.61□□□□□ -2.51
NPTN-203ENST00000561898 CRYBG3Q68DQ2 2970 aa-0.61□□□□□ -2.51
NPTN-203ENST00000561898 PRUNE2Q8WUY3 3088 aa-0.61□□□□□ -2.51
NPTN-203ENST00000561898 TSC2P49815 1807 aa-0.61□□□□□ -2.51
NPTN-203ENST00000561898 URB1O60287 2271 aaKnown RBP-0.62□□□□□ -2.51
NPTN-203ENST00000561898 MUC22E2RYF6 1773 aaPredicted RBP-0.62□□□□□ -2.51
NPTN-203ENST00000561898 COL14A1Q05707 1796 aaKnown RBP-0.62□□□□□ -2.51
NPTN-203ENST00000561898 ACACAQ13085 2346 aa-0.62□□□□□ -2.51
NPTN-203ENST00000561898 RPS25P62851 125 aaKnown RBP-0.62□□□□□ -2.51
NPTN-203ENST00000561898 TTC9CQ8N5M4 171 aa-0.62□□□□□ -2.51
NPTN-203ENST00000561898 TMEM191AQ9H0A3 160 aa-0.62□□□□□ -2.51
NPTN-203ENST00000561898 V9GYH0 126 aa-0.62□□□□□ -2.51
NPTN-203ENST00000561898 MYO15AQ9UKN7 3530 aa-0.62□□□□□ -2.51
NPTN-203ENST00000561898 ZNF518AQ6AHZ1 1483 aa-0.62□□□□□ -2.51
NPTN-203ENST00000561898 IFT140Q96RY7 1462 aa-0.62□□□□□ -2.51
NPTN-203ENST00000561898 USF3Q68DE3 2245 aa-0.62□□□□□ -2.51
NPTN-203ENST00000561898 VPS13CQ709C8 3753 aa-0.62□□□□□ -2.51
NPTN-203ENST00000561898 LRRC37A3O60309 1634 aa-0.63□□□□□ -2.51
NPTN-203ENST00000561898 COX17Q14061 63 aa-0.63□□□□□ -2.51
NPTN-203ENST00000561898 MAFIPQ8WZ33 124 aa-0.63□□□□□ -2.51
NPTN-203ENST00000561898 ANP32BQ92688 251 aaKnown RBP-0.63□□□□□ -2.51
NPTN-203ENST00000561898 CCDC167Q9P0B6 97 aa-0.63□□□□□ -2.51
NPTN-203ENST00000561898 DNAJC13O75165 2243 aa-0.63□□□□□ -2.51
NPTN-203ENST00000561898 KNL1Q8NG31 2342 aa-0.63□□□□□ -2.51
NPTN-203ENST00000561898 ADGRB1O14514 1584 aa-0.63□□□□□ -2.51
NPTN-203ENST00000561898 FHAD1B1AJZ9 1412 aa-0.64□□□□□ -2.51
NPTN-203ENST00000561898 IFT172Q9UG01 1749 aa-0.64□□□□□ -2.51
NPTN-203ENST00000561898 PLXNB2O15031 1838 aa-0.64□□□□□ -2.51
NPTN-203ENST00000561898 ARFGEF1Q9Y6D6 1849 aa-0.64□□□□□ -2.51
NPTN-203ENST00000561898 MGAQ8IWI9 3026 aa-0.64□□□□□ -2.51
NPTN-203ENST00000561898 HIST1H1DP16402 221 aaKnown RBP-0.64□□□□□ -2.51
NPTN-203ENST00000561898 Q6JHZ5 121 aa-0.64□□□□□ -2.51
NPTN-203ENST00000561898 SPRR2FQ96RM1 72 aa-0.64□□□□□ -2.51
NPTN-203ENST00000561898 SDF2Q99470 211 aa-0.64□□□□□ -2.51
NPTN-203ENST00000561898 LENEPQ9Y5L5 61 aa-0.64□□□□□ -2.51
NPTN-203ENST00000561898 PARP14Q460N5 1801 aa-0.64□□□□□ -2.51
NPTN-203ENST00000561898 WDFY3Q8IZQ1 3526 aa-0.64□□□□□ -2.51
NPTN-203ENST00000561898 LRBAP50851 2863 aa-0.65□□□□□ -2.51
NPTN-203ENST00000561898 MRC1P22897 1456 aa-0.65□□□□□ -2.51
NPTN-203ENST00000561898 FAM186AA6NE01 2351 aa-0.65□□□□□ -2.51
NPTN-203ENST00000561898 SPAARA0A1B0GVQ0 90 aa-0.65□□□□□ -2.51
NPTN-203ENST00000561898 TNFP01375 233 aa-0.65□□□□□ -2.51
NPTN-203ENST00000561898 KLK9Q2XQG4 91 aa-0.65□□□□□ -2.51
NPTN-203ENST00000561898 SMIM21Q3B7S5 101 aa-0.65□□□□□ -2.51
NPTN-203ENST00000561898 COPS9Q8WXC6 57 aa-0.65□□□□□ -2.51
NPTN-203ENST00000561898 DPH3Q96FX2 82 aa-0.65□□□□□ -2.51
NPTN-203ENST00000561898 PDCD10Q9BUL8 212 aa-0.65□□□□□ -2.51
NPTN-203ENST00000561898 ACACBO00763 2458 aa-0.65□□□□□ -2.51
NPTN-203ENST00000561898 ITPR2Q14571 2701 aa-0.66□□□□□ -2.51
NPTN-203ENST00000561898 BICRAQ9NZM4 1560 aa-0.66□□□□□ -2.51
NPTN-203ENST00000561898 CDK5RAP2Q96SN8 1893 aa-0.66□□□□□ -2.52
NPTN-203ENST00000561898 I3L2K1 104 aa-0.66□□□□□ -2.52
NPTN-203ENST00000561898 MYH13Q9UKX3 1938 aa-0.66□□□□□ -2.52
NPTN-203ENST00000561898 BCL9LQ86UU0 1499 aa-0.67□□□□□ -2.52
NPTN-203ENST00000561898 WDFY4Q6ZS81 3184 aa-0.67□□□□□ -2.52
NPTN-203ENST00000561898 LRP6O75581 1613 aa-0.67□□□□□ -2.52
NPTN-203ENST00000561898 APOC3P02656 99 aa-0.67□□□□□ -2.52
NPTN-203ENST00000561898 BAGE2Q86Y30 109 aa-0.67□□□□□ -2.52
NPTN-203ENST00000561898 PFDN5Q99471 154 aa-0.67□□□□□ -2.52
NPTN-203ENST00000561898 DOCK1Q14185 1865 aa-0.67□□□□□ -2.52
NPTN-203ENST00000561898 F8VRH5 84 aa-0.68□□□□□ -2.52
NPTN-203ENST00000561898 UQCR11O14957 56 aa-0.68□□□□□ -2.52
NPTN-203ENST00000561898 COX6B1P14854 86 aa-0.68□□□□□ -2.52
NPTN-203ENST00000561898 PXDNQ92626 1479 aa-0.68□□□□□ -2.52
NPTN-203ENST00000561898 KDM5AP29375 1690 aaKnown RBP-0.69□□□□□ -2.52
NPTN-203ENST00000561898 MYO9AB2RTY4 2548 aa-0.69□□□□□ -2.52
NPTN-203ENST00000561898 SPRR1BP22528 89 aa-0.69□□□□□ -2.52
NPTN-203ENST00000561898 C12orf73Q69YU5 71 aa-0.69□□□□□ -2.52
NPTN-203ENST00000561898 FXYD6Q9H0Q3 95 aa-0.69□□□□□ -2.52
NPTN-203ENST00000561898 CEP290O15078 2479 aa-0.69□□□□□ -2.52
NPTN-203ENST00000561898 TLN1Q9Y490 2541 aaKnown RBP-0.7□□□□□ -2.52
NPTN-203ENST00000561898 DCHS1Q96JQ0 3298 aa-0.7□□□□□ -2.52
NPTN-203ENST00000561898 DNAH14Q0VDD8 3507 aa-0.7□□□□□ -2.52
NPTN-203ENST00000561898 TPPP2P59282 170 aa-0.7□□□□□ -2.52
NPTN-203ENST00000561898 ARPC4P59998 168 aa-0.7□□□□□ -2.52
NPTN-203ENST00000561898 AMELXQ99217 191 aa-0.7□□□□□ -2.52
NPTN-203ENST00000561898 IQSEC2Q5JU85 1478 aa-0.7□□□□□ -2.52
NPTN-203ENST00000561898 PPIP5K1Q6PFW1 1433 aa-0.71□□□□□ -2.52
NPTN-203ENST00000561898 TLN2Q9Y4G6 2542 aa-0.71□□□□□ -2.52
NPTN-203ENST00000561898 WDR7Q9Y4E6 1490 aa-0.71□□□□□ -2.52
NPTN-203ENST00000561898 GOLGA4Q13439 2230 aaKnown RBP-0.71□□□□□ -2.52
NPTN-203ENST00000561898 FRYLO94915 3013 aa-0.71□□□□□ -2.52
NPTN-203ENST00000561898 CFAP54Q96N23 3096 aa-0.71□□□□□ -2.52
NPTN-203ENST00000561898 SZT2Q5T011 3432 aa-0.71□□□□□ -2.52
NPTN-203ENST00000561898 COL4A6Q14031 1691 aa-0.72□□□□□ -2.52
NPTN-203ENST00000561898 SPINK4O60575 86 aa-0.72□□□□□ -2.52
NPTN-203ENST00000561898 Q6AWC8 147 aa-0.72□□□□□ -2.52
NPTN-203ENST00000561898 Q8N8P6 123 aa-0.72□□□□□ -2.52
NPTN-203ENST00000561898 MGST2Q99735 147 aa-0.72□□□□□ -2.52
NPTN-203ENST00000561898 LINC00472Q9H8W2 130 aa-0.72□□□□□ -2.52
NPTN-203ENST00000561898 DYNLRB1Q9NP97 96 aa-0.72□□□□□ -2.52
NPTN-203ENST00000561898 NDUFA4L2Q9NRX3 87 aa-0.72□□□□□ -2.52
NPTN-203ENST00000561898 CEP350Q5VT06 3117 aa-0.72□□□□□ -2.53
NPTN-203ENST00000561898 MKI67P46013 3256 aaKnown RBP-0.72□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms