RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 HIST1H2BJP06899 126 aa10.7□□□□□ -0.7
USB1-204ENST00000561568 GCSHP23434 173 aa10.7□□□□□ -0.7
USB1-204ENST00000561568 HIST1H2BOP23527 126 aa10.7□□□□□ -0.7
USB1-204ENST00000561568 HIST1H2BBP33778 126 aa10.7□□□□□ -0.7
USB1-204ENST00000561568 HIST1H2BDP58876 126 aa10.7□□□□□ -0.7
USB1-204ENST00000561568 HIST1H2BCP62807 126 aa10.7□□□□□ -0.7
USB1-204ENST00000561568 HIST2H2BEQ16778 126 aa10.7□□□□□ -0.7
USB1-204ENST00000561568 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.7□□□□□ -0.7
USB1-204ENST00000561568 C5orf38Q86SI9 138 aa10.7□□□□□ -0.7
USB1-204ENST00000561568 HIST1H2BHQ93079 126 aa10.7□□□□□ -0.7
USB1-204ENST00000561568 HIST1H2BNQ99877 126 aa10.7□□□□□ -0.7
USB1-204ENST00000561568 HIST1H2BMQ99879 126 aa10.7□□□□□ -0.7
USB1-204ENST00000561568 C15orf56Q8N910 161 aa10.69□□□□□ -0.7
USB1-204ENST00000561568 GVQW2A0A096LPI5 108 aaPredicted RBP10.68□□□□□ -0.7
USB1-204ENST00000561568 FUSP35637 526 aaKnown RBP eCLIP10.68□□□□□ -0.7
USB1-204ENST00000561568 NDUFA6P56556 154 aa10.68□□□□□ -0.7
USB1-204ENST00000561568 HERVK_113P63121 156 aa10.68□□□□□ -0.7
USB1-204ENST00000561568 COX6A2Q02221 97 aa10.68□□□□□ -0.7
USB1-204ENST00000561568 FAM19A2Q8N3H0 131 aa10.68□□□□□ -0.7
USB1-204ENST00000561568 GEMIN7Q9H840 131 aaKnown RBP10.68□□□□□ -0.7
USB1-204ENST00000561568 PKD1P98161 4303 aa10.68□□□□□ -0.7
USB1-204ENST00000561568 A0A087WZ39 114 aa10.67□□□□□ -0.7
USB1-204ENST00000561568 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.67□□□□□ -0.7
USB1-204ENST00000561568 ZNF561-AS1K7EIQ3 104 aa10.67□□□□□ -0.7
USB1-204ENST00000561568 LINC01561Q8N1V8 128 aa10.67□□□□□ -0.7
USB1-204ENST00000561568 TINCRA0A1B0GVN0 87 aa10.66□□□□□ -0.7
USB1-204ENST00000561568 NUPR1O60356 82 aa10.66□□□□□ -0.7
USB1-204ENST00000561568 LINC00310P59036 64 aa10.66□□□□□ -0.7
USB1-204ENST00000561568 CNBPP62633 177 aaKnown RBP10.66□□□□□ -0.7
USB1-204ENST00000561568 IFI27L1Q96BM0 104 aa10.66□□□□□ -0.7
USB1-204ENST00000561568 A0A0J9YXV3 536 aa10.65□□□□□ -0.7
USB1-204ENST00000561568 LEPROTL1O95214 131 aa10.65□□□□□ -0.7
USB1-204ENST00000561568 HIGD2BQ4VC39 106 aa10.65□□□□□ -0.7
USB1-204ENST00000561568 EPPK1P58107 5090 aaKnown RBP10.65□□□□□ -0.7
USB1-204ENST00000561568 IGHV3-64A0A075B6Q5 118 aa10.64□□□□□ -0.71
USB1-204ENST00000561568 C9orf163Q8N9P6 203 aa10.64□□□□□ -0.71
USB1-204ENST00000561568 OR10D4PQ8NGN7 298 aa10.64□□□□□ -0.71
USB1-204ENST00000561568 HSPB8Q9UJY1 196 aa10.63□□□□□ -0.71
USB1-204ENST00000561568 F8WDY8 70 aa10.62□□□□□ -0.71
USB1-204ENST00000561568 SLPIP03973 132 aa10.62□□□□□ -0.71
USB1-204ENST00000561568 CDKN2A-AS1Q9UH64 79 aa10.62□□□□□ -0.71
USB1-204ENST00000561568 HECTD4Q9Y4D8 3996 aa10.62□□□□□ -0.71
USB1-204ENST00000561568 TRAV12-1A0A0B4J245 112 aa10.61□□□□□ -0.71
USB1-204ENST00000561568 KRTAP10-1P60331 282 aa10.61□□□□□ -0.71
USB1-204ENST00000561568 COA6Q5JTJ3 125 aaKnown RBP10.61□□□□□ -0.71
USB1-204ENST00000561568 ORAOV1Q8WV07 137 aa10.61□□□□□ -0.71
USB1-204ENST00000561568 C2orf48Q96LS8 159 aa10.61□□□□□ -0.71
USB1-204ENST00000561568 DNAH11Q96DT5 4516 aa10.6□□□□□ -0.71
USB1-204ENST00000561568 IGLV4-69A0A075B6H9 119 aa10.6□□□□□ -0.71
USB1-204ENST00000561568 IGLV5-45A0A087WSX0 123 aa10.6□□□□□ -0.71
USB1-204ENST00000561568 IGLC3P0DOY3 106 aa10.6□□□□□ -0.71
USB1-204ENST00000561568 FABP4P15090 132 aa10.6□□□□□ -0.71
USB1-204ENST00000561568 SYCNQ0VAF6 134 aa10.6□□□□□ -0.71
USB1-204ENST00000561568 LINC00469Q8N7U9 141 aa10.6□□□□□ -0.71
USB1-204ENST00000561568 PACRGQ96M98 296 aaPredicted RBP10.6□□□□□ -0.71
USB1-204ENST00000561568 CHTOPQ9Y3Y2 248 aaKnown RBP10.6□□□□□ -0.71
USB1-204ENST00000561568 H3BRM9 83 aa10.59□□□□□ -0.71
USB1-204ENST00000561568 SPAG11BQ08648 103 aa10.59□□□□□ -0.71
USB1-204ENST00000561568 LINC00526Q96FQ7 95 aa10.59□□□□□ -0.71
USB1-204ENST00000561568 LINC01620Q4KN68 170 aa10.58□□□□□ -0.72
USB1-204ENST00000561568 CAMK2N2Q96S95 79 aa10.58□□□□□ -0.72
USB1-204ENST00000561568 CDK2AP2O75956 126 aa10.57□□□□□ -0.72
USB1-204ENST00000561568 PRSS2P07478 247 aa10.57□□□□□ -0.72
USB1-204ENST00000561568 SDIM1Q6ZPB5 146 aa10.57□□□□□ -0.72
USB1-204ENST00000561568 CARD19Q96LW7 228 aa10.57□□□□□ -0.72
USB1-204ENST00000561568 CHAC1Q9BUX1 264 aa10.57□□□□□ -0.72
USB1-204ENST00000561568 KIAA0087Q14695 138 aa10.56□□□□□ -0.72
USB1-204ENST00000561568 C6orf226Q5I0X4 101 aa10.56□□□□□ -0.72
USB1-204ENST00000561568 MAP1LC3CQ9BXW4 147 aa10.56□□□□□ -0.72
USB1-204ENST00000561568 PKIGQ9Y2B9 76 aa10.56□□□□□ -0.72
USB1-204ENST00000561568 F8VRH5 84 aa10.55□□□□□ -0.72
USB1-204ENST00000561568 NDUFA1O15239 70 aa10.55□□□□□ -0.72
USB1-204ENST00000561568 RNF151Q2KHN1 245 aa10.55□□□□□ -0.72
USB1-204ENST00000561568 Q8IZM0 81 aa10.55□□□□□ -0.72
USB1-204ENST00000561568 TMEM170BQ5T4T1 132 aa10.54□□□□□ -0.72
USB1-204ENST00000561568 Q6ZRU5 148 aa10.54□□□□□ -0.72
USB1-204ENST00000561568 MRPL35Q9NZE8 188 aaKnown RBP10.54□□□□□ -0.72
USB1-204ENST00000561568 TOMM7Q9P0U1 55 aa10.54□□□□□ -0.72
USB1-204ENST00000561568 PKHD1P08F94 4074 aa10.53□□□□□ -0.72
USB1-204ENST00000561568 C11orf86A6NJI1 115 aa10.53□□□□□ -0.72
USB1-204ENST00000561568 SMIM1B2RUZ4 78 aa10.53□□□□□ -0.72
USB1-204ENST00000561568 H0Y8G0 127 aa10.53□□□□□ -0.72
USB1-204ENST00000561568 ZNF22P17026 224 aaPredicted RBP10.53□□□□□ -0.72
USB1-204ENST00000561568 CKS1BP61024 79 aa10.53□□□□□ -0.72
USB1-204ENST00000561568 ODF1Q14990 250 aa10.52□□□□□ -0.73
USB1-204ENST00000561568 UNQ6190/PRO20217Q6UXQ8 127 aa10.52□□□□□ -0.73
USB1-204ENST00000561568 Q6ZSA8 131 aa10.52□□□□□ -0.73
USB1-204ENST00000561568 FAM30AQ9NZY2 134 aa10.52□□□□□ -0.73
USB1-204ENST00000561568 S100A6P06703 90 aa10.51□□□□□ -0.73
USB1-204ENST00000561568 SPINK8P0C7L1 97 aa10.51□□□□□ -0.73
USB1-204ENST00000561568 TRBV30A0A0K0K1B3 111 aa10.5□□□□□ -0.73
USB1-204ENST00000561568 PLNP26678 52 aa10.5□□□□□ -0.73
USB1-204ENST00000561568 CXCL5P42830 114 aa10.5□□□□□ -0.73
USB1-204ENST00000561568 XGP55808 180 aa10.5□□□□□ -0.73
USB1-204ENST00000561568 COX7B2Q8TF08 81 aa10.5□□□□□ -0.73
USB1-204ENST00000561568 DPH3Q96FX2 82 aa10.5□□□□□ -0.73
USB1-204ENST00000561568 BIRC6Q9NR09 4857 aa10.49□□□□□ -0.73
USB1-204ENST00000561568 IGLV5-39A0A0G2JS06 123 aa10.49□□□□□ -0.73
USB1-204ENST00000561568 LOC107984640A0A0U1RRK4 108 aa10.49□□□□□ -0.73
USB1-204ENST00000561568 SYS1-DBNDD2H3BUS1 97 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms