RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 CAMPP49913 170 aa5.73□□□□□ -1.49
PALB2-202ENST00000561514 TMEM170BQ5T4T1 132 aa5.73□□□□□ -1.49
PALB2-202ENST00000561514 GAGE2AQ6NT46 116 aa5.73□□□□□ -1.49
PALB2-202ENST00000561514 LINC00173Q6ZV60 143 aa5.73□□□□□ -1.49
PALB2-202ENST00000561514 FLG2Q5D862 2391 aaPredicted RBP5.72□□□□□ -1.49
PALB2-202ENST00000561514 EPM2AB3EWF7 344 aa5.72□□□□□ -1.49
PALB2-202ENST00000561514 NDUFC2-KCTD14E9PQ53 114 aa5.72□□□□□ -1.49
PALB2-202ENST00000561514 M0R3E3 92 aa5.72□□□□□ -1.49
PALB2-202ENST00000561514 FOXA3P55318 350 aaPredicted RBP5.72□□□□□ -1.49
PALB2-202ENST00000561514 C6orf226Q5I0X4 101 aa5.72□□□□□ -1.49
PALB2-202ENST00000561514 MIC13Q5XKP0 118 aa5.72□□□□□ -1.49
PALB2-202ENST00000561514 C9orf47Q6ZRZ4 202 aa5.72□□□□□ -1.49
PALB2-202ENST00000561514 LYPD1Q8N2G4 141 aa5.72□□□□□ -1.49
PALB2-202ENST00000561514 ZFAND2AQ8N6M9 145 aa5.72□□□□□ -1.49
PALB2-202ENST00000561514 LINC00477Q96M19 166 aa5.72□□□□□ -1.49
PALB2-202ENST00000561514 HIST1H4GQ99525 98 aa5.72□□□□□ -1.49
PALB2-202ENST00000561514 SRRM2Q9UQ35 2752 aaKnown RBP5.72□□□□□ -1.49
PALB2-202ENST00000561514 TRGV2A0A075B6R0 118 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 TINCRA0A1B0GVN0 87 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 ATOX1O00244 68 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 DPM2O94777 84 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 NXPH4O95158 308 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 COX7CP15954 63 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 CACNG7P62955 275 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 GNG5P63218 68 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 AMN1Q8IY45 258 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 ANKRD29Q8N6D5 301 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 COPS9Q8WXC6 57 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 AGPAT4-IT1Q9H0P7 198 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 ICOSQ9Y6W8 199 aa5.71□□□□□ -1.5
PALB2-202ENST00000561514 TRBV7-3A0A075B6L6 115 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 A0A087WTM6 91 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 TRGV1A0A0A0MS02 117 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 LINC01546A6NGU7 62 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 K7ERJ3 54 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 IGKCP01834 107 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 TRACP01848 142 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 PLNP26678 52 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 PRR9Q5T870 116 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 PCP2Q8IVA1 136 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 PLEKHB2Q96CS7 222 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 PRO0255Q9UI72 69 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 EPDR1Q9UM22 224 aa5.7□□□□□ -1.5
PALB2-202ENST00000561514 IGHV1OR15-1A0A075B7D0 117 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 TRBV6-1A0A0K0K1D8 114 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 PAX4O43316 350 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 SLC25A20O43772 301 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 P01737 135 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 PSMB2P49721 201 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 UBE2D1P51668 147 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 KRTAP10-1P60331 282 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 UBE2L3P68036 154 aaKnown RBP5.69□□□□□ -1.5
PALB2-202ENST00000561514 ERCC8Q13216 396 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 FHL2Q14192 279 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 LYPD5Q6UWN5 251 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 FMC1Q96HJ9 113 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 FAM167A-AS1Q96KT0 104 aa5.69□□□□□ -1.5
PALB2-202ENST00000561514 A0A1B0GUT8 65 aa5.68□□□□□ -1.5
PALB2-202ENST00000561514 H3BT86 120 aa5.68□□□□□ -1.5
PALB2-202ENST00000561514 PEX7O00628 323 aa5.68□□□□□ -1.5
PALB2-202ENST00000561514 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
PALB2-202ENST00000561514 INAFM2P0DMQ5 153 aa5.68□□□□□ -1.5
PALB2-202ENST00000561514 PYYP10082 97 aa5.68□□□□□ -1.5
PALB2-202ENST00000561514 Q5VSD8 79 aa5.68□□□□□ -1.5
PALB2-202ENST00000561514 GOLT1AQ6ZVE7 132 aa5.68□□□□□ -1.5
PALB2-202ENST00000561514 IGKV2-40A0A087WW87 121 aaPredicted RBP5.67□□□□□ -1.5
PALB2-202ENST00000561514 TRAV8-1A0A0A6YYK1 113 aa5.67□□□□□ -1.5
PALB2-202ENST00000561514 RBAKDNA6NC62 111 aa5.67□□□□□ -1.5
PALB2-202ENST00000561514 IGKV2D-40P01614 121 aaPredicted RBP5.67□□□□□ -1.5
PALB2-202ENST00000561514 RNASE4P34096 147 aaKnown RBP5.67□□□□□ -1.5
PALB2-202ENST00000561514 TIRAPP58753 221 aa5.67□□□□□ -1.5
PALB2-202ENST00000561514 Q6ZQT7 251 aa5.67□□□□□ -1.5
PALB2-202ENST00000561514 ORMDL3Q8N138 153 aa5.67□□□□□ -1.5
PALB2-202ENST00000561514 EXOC3-AS1Q8N2X6 119 aa5.67□□□□□ -1.5
PALB2-202ENST00000561514 C1orf43Q9BWL3 253 aa5.67□□□□□ -1.5
PALB2-202ENST00000561514 AAMDCQ9H7C9 122 aa5.67□□□□□ -1.5
PALB2-202ENST00000561514 HHLA3Q9XRX5 114 aa5.67□□□□□ -1.5
PALB2-202ENST00000561514 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 LOC107984156A0A0G2JMH3 177 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 LOC107984640A0A0U1RRK4 108 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 C19orf71A6NCJ1 209 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 K7EQD1 137 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 NDUFC2O95298 119 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 ZNF138P52744 262 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 ATXN8Q156A1 80 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 LINC00643Q86TS7 51 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 ARL17AQ8IVW1 177 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 UBE2WQ96B02 151 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 FXYD5Q96DB9 178 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 DPH3Q96FX2 82 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 C8orf49Q96NF6 230 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 JPT2Q9H910 190 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 NXT2Q9NPJ8 142 aaKnown RBP5.66□□□□□ -1.5
PALB2-202ENST00000561514 MSRB1Q9NZV6 116 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 LENEPQ9Y5L5 61 aa5.66□□□□□ -1.5
PALB2-202ENST00000561514 LTAP01374 205 aa5.65□□□□□ -1.5
PALB2-202ENST00000561514 IGHV3-53P01767 116 aa5.65□□□□□ -1.5
PALB2-202ENST00000561514 FUSP35637 526 aaKnown RBP eCLIP5.65□□□□□ -1.5
PALB2-202ENST00000561514 WFDC10BQ8IUB3 73 aa5.65□□□□□ -1.5
PALB2-202ENST00000561514 Q8TAT8 98 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms