RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 UQCR10Q9UDW1 63 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 CDKN2A-AS1Q9UH64 79 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 COX8AP10176 69 aa7□□□□□ -1.29
USP3-219ENST00000561326 MIAQ16674 131 aa7□□□□□ -1.29
USP3-219ENST00000561326 SLC25A34Q6PIV7 304 aa7□□□□□ -1.29
USP3-219ENST00000561326 CLPSL2Q6UWE3 100 aa7□□□□□ -1.29
USP3-219ENST00000561326 Q8N3U1 123 aa7□□□□□ -1.29
USP3-219ENST00000561326 C10orf126Q8N4M7 172 aa7□□□□□ -1.29
USP3-219ENST00000561326 UBE2WQ96B02 151 aa7□□□□□ -1.29
USP3-219ENST00000561326 MIEN1Q9BRT3 115 aa7□□□□□ -1.29
USP3-219ENST00000561326 Q9H8V8 135 aa7□□□□□ -1.29
USP3-219ENST00000561326 LEPROTO15243 131 aa6.99□□□□□ -1.29
USP3-219ENST00000561326 XCL1P47992 114 aa6.99□□□□□ -1.29
USP3-219ENST00000561326 CD164L2Q6UWJ8 174 aa6.99□□□□□ -1.29
USP3-219ENST00000561326 CHCHD10Q8WYQ3 142 aaPredicted RBP6.99□□□□□ -1.29
USP3-219ENST00000561326 TENM2Q9NT68 2774 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 A0A087WZ39 114 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 TRAV8-3A0A0A6YYJ7 113 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 IGHV3OR16-9A0A0B4J2B5 98 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 IGHV1-58A0A0C4DH39 117 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 PCP4L1A6NKN8 68 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 J3QQQ9 107 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 DLEU1O43261 78 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 LGALS3P17931 250 aaKnown RBP6.98□□□□□ -1.29
USP3-219ENST00000561326 ZFAND6Q6FIF0 208 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 ENHOQ6UWT2 76 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 LINC01561Q8N1V8 128 aa6.98□□□□□ -1.29
USP3-219ENST00000561326 IGLV10-54A0A075B6I4 117 aa6.97□□□□□ -1.29
USP3-219ENST00000561326 IGKV2D-26A0A0A0MRZ7 120 aa6.97□□□□□ -1.29
USP3-219ENST00000561326 COX7A2LO14548 114 aa6.97□□□□□ -1.29
USP3-219ENST00000561326 BOD1L2Q8IYS8 172 aa6.97□□□□□ -1.29
USP3-219ENST00000561326 RMI2Q96E14 147 aa6.97□□□□□ -1.29
USP3-219ENST00000561326 DYNC2H1Q8NCM8 4307 aaKnown RBP6.96□□□□□ -1.29
USP3-219ENST00000561326 IGHV3-64A0A075B6Q5 118 aa6.96□□□□□ -1.3
USP3-219ENST00000561326 IBA57-AS1B1ANH7 110 aa6.96□□□□□ -1.3
USP3-219ENST00000561326 APOMO95445 188 aa6.96□□□□□ -1.3
USP3-219ENST00000561326 MALP21145 153 aa6.96□□□□□ -1.3
USP3-219ENST00000561326 DDTP30046 118 aa6.96□□□□□ -1.3
USP3-219ENST00000561326 C5orf38Q86SI9 138 aa6.96□□□□□ -1.3
USP3-219ENST00000561326 PCP2Q8IVA1 136 aa6.96□□□□□ -1.3
USP3-219ENST00000561326 C1orf43Q9BWL3 253 aa6.96□□□□□ -1.3
USP3-219ENST00000561326 DNAH7Q8WXX0 4024 aa6.95□□□□□ -1.3
USP3-219ENST00000561326 IGLV5-39A0A0G2JS06 123 aa6.95□□□□□ -1.3
USP3-219ENST00000561326 MYMXA0A1B0GTQ4 84 aa6.95□□□□□ -1.3
USP3-219ENST00000561326 GAGE12HA6NDE8 117 aa6.95□□□□□ -1.3
USP3-219ENST00000561326 ZNF815PA8K554 130 aa6.95□□□□□ -1.3
USP3-219ENST00000561326 SMIM1B2RUZ4 78 aa6.95□□□□□ -1.3
USP3-219ENST00000561326 C3orf84H3BNL1 204 aa6.94□□□□□ -1.3
USP3-219ENST00000561326 PRSS2P07478 247 aa6.94□□□□□ -1.3
USP3-219ENST00000561326 HNRNPA3P51991 378 aaKnown RBP6.94□□□□□ -1.3
USP3-219ENST00000561326 TTC32Q5I0X7 151 aa6.94□□□□□ -1.3
USP3-219ENST00000561326 COX11Q9Y6N1 276 aa6.94□□□□□ -1.3
USP3-219ENST00000561326 IGKV2D-24A0A075B6R9 120 aa6.93□□□□□ -1.3
USP3-219ENST00000561326 FOXI1Q12951 378 aa6.93□□□□□ -1.3
USP3-219ENST00000561326 C6orf226Q5I0X4 101 aa6.93□□□□□ -1.3
USP3-219ENST00000561326 SFTA2Q6UW10 78 aa6.93□□□□□ -1.3
USP3-219ENST00000561326 SCGB1D4Q6XE38 83 aa6.93□□□□□ -1.3
USP3-219ENST00000561326 MAPKAPK5-AS1Q8N8E1 139 aa6.93□□□□□ -1.3
USP3-219ENST00000561326 COX7B2Q8TF08 81 aa6.93□□□□□ -1.3
USP3-219ENST00000561326 Q9HAA7 133 aa6.93□□□□□ -1.3
USP3-219ENST00000561326 TOMM7Q9P0U1 55 aa6.93□□□□□ -1.3
USP3-219ENST00000561326 NDUFA12Q9UI09 145 aa6.93□□□□□ -1.3
USP3-219ENST00000561326 CFAP161Q6P656 301 aa6.92□□□□□ -1.3
USP3-219ENST00000561326 TM2D2Q9BX73 214 aa6.92□□□□□ -1.3
USP3-219ENST00000561326 TTTY13Q9BZ97 58 aa6.92□□□□□ -1.3
USP3-219ENST00000561326 HIGD1BQ9P298 99 aa6.92□□□□□ -1.3
USP3-219ENST00000561326 NDUFA1O15239 70 aa6.91□□□□□ -1.3
USP3-219ENST00000561326 TSPEAR-AS2P59090 65 aa6.91□□□□□ -1.3
USP3-219ENST00000561326 HERV-K104P63124 156 aa6.91□□□□□ -1.3
USP3-219ENST00000561326 CIRBPQ14011 172 aaKnown RBP6.91□□□□□ -1.3
USP3-219ENST00000561326 CASC10Q5T4H9 136 aa6.91□□□□□ -1.3
USP3-219ENST00000561326 Q8IZM0 81 aa6.91□□□□□ -1.3
USP3-219ENST00000561326 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
USP3-219ENST00000561326 LINC00587B1AMM8 73 aa6.9□□□□□ -1.3
USP3-219ENST00000561326 CKS1BP61024 79 aa6.9□□□□□ -1.3
USP3-219ENST00000561326 CSMD3Q7Z407 3707 aa6.89□□□□□ -1.31
USP3-219ENST00000561326 NBDYA0A0U1RRE5 68 aa6.89□□□□□ -1.31
USP3-219ENST00000561326 CXCL5P42830 114 aa6.89□□□□□ -1.31
USP3-219ENST00000561326 CTAG1AP78358 180 aa6.89□□□□□ -1.31
USP3-219ENST00000561326 SRSF9Q13242 221 aaKnown RBP eCLIP6.89□□□□□ -1.31
USP3-219ENST00000561326 KRTAP26-1Q6PEX3 210 aa6.89□□□□□ -1.31
USP3-219ENST00000561326 ZNF561-AS1K7EIQ3 104 aa6.88□□□□□ -1.31
USP3-219ENST00000561326 TAL2Q16559 108 aa6.88□□□□□ -1.31
USP3-219ENST00000561326 C2orf91Q6ZV80 131 aa6.88□□□□□ -1.31
USP3-219ENST00000561326 HIST1H4GQ99525 98 aa6.88□□□□□ -1.31
USP3-219ENST00000561326 A0A0J9YXY3 114 aa6.87□□□□□ -1.31
USP3-219ENST00000561326 TMEM238C9JI98 176 aa6.87□□□□□ -1.31
USP3-219ENST00000561326 F8WDY8 70 aa6.87□□□□□ -1.31
USP3-219ENST00000561326 M0R143 59 aa6.87□□□□□ -1.31
USP3-219ENST00000561326 PSCAO43653 123 aa6.87□□□□□ -1.31
USP3-219ENST00000561326 TIMM17BO60830 172 aa6.87□□□□□ -1.31
USP3-219ENST00000561326 HSD52Q0P140 79 aa6.87□□□□□ -1.31
USP3-219ENST00000561326 ZNF625Q96I27 306 aaPredicted RBP6.87□□□□□ -1.31
USP3-219ENST00000561326 LY6G6CO95867 125 aa6.86□□□□□ -1.31
USP3-219ENST00000561326 SPAG11BQ08648 103 aa6.86□□□□□ -1.31
USP3-219ENST00000561326 MEIG1Q5JSS6 88 aa6.86□□□□□ -1.31
USP3-219ENST00000561326 Q6ZVH6 145 aa6.86□□□□□ -1.31
USP3-219ENST00000561326 SPANXB1Q9NS25 103 aaPredicted RBP6.86□□□□□ -1.31
USP3-219ENST00000561326 TP73-AS1Q9UF72 201 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms